Basic Information

Insect: Epirrita christyi
Gene Symbol: -
Assembly: GCA_951392215.1
Location: OX595857.1:8499052-8509613[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.02 1.3 10.3 1.7 2 23 224 246 223 246 0.95

2 8 0.0011 0.072 14.3 0.9 1 23 251 273 251 273 0.98

3 8 1.4e-06 9.5e-05 23.4 0.5 1 23 277 299 277 299 0.99

4 8 0.86 58 5.2 0.0 3 19 316 332 315 337 0.93

5 8 0.00037 0.025 15.7 0.9 1 23 341 363 341 363 0.98

6 8 1.4e-05 0.00094 20.2 0.1 3 23 405 425 403 425 0.96

7 8 0.54 37 5.8 0.1 1 14 431 444 431 450 0.80

8 8 0.48 32 6.0 0.8 2 23 460 482 460 482 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.02	1.3	10.3	1.7	2	23	224	246	223	246	0.95
2	8	0.0011	0.072	14.3	0.9	1	23	251	273	251	273	0.98
3	8	1.4e-06	9.5e-05	23.4	0.5	1	23	277	299	277	299	0.99
4	8	0.86	58	5.2	0.0	3	19	316	332	315	337	0.93
5	8	0.00037	0.025	15.7	0.9	1	23	341	363	341	363	0.98
6	8	1.4e-05	0.00094	20.2	0.1	3	23	405	425	403	425	0.96
7	8	0.54	37	5.8	0.1	1	14	431	444	431	450	0.80
8	8	0.48	32	6.0	0.8	2	23	460	482	460	482	0.96

Sequence Information

Coding Sequence: ATGGCCGAGGGCTTGGACTTGAAAGCTGTCGTAAAACATCTGGCGAACGGATCTCTGGGTGATAATTTATGTGTGGTTTGTTTACTGCCGTTCACTGGGGATGAGTGTGAGAATATATTCACATCAATATGTAAAAAAGACGAGGAGTATTGTATAGCCGATGTACTCAGAGAAGTCTGCCAATTGAAGATTCAGGACACAGAACATTGCAAGATCTGCTGTAACTGTTTTAGTTTGGCCTCGGCGGCATACAAATTCTACCTACAAGCGAAACGCAGTTATGAAATCTTGAATTTTTACACTGACCAACTTTCCAGCAATATTGAAGACCTCGATATTGCTCAGGAAGATGGAAAACGCTTGCTTTGCATCCCGTTGCCGGTCTACACGCCAGAAACGCCAGGATTTGACTACGGATTTGACAGTATTGGTTCTAGAAAAATGGGTGATGATGTGGAATTTGATAAAGATGGCACCAATATTGTGAGTGATaaagaaaatgatgatgaagtcatTGTTATAGTTAAAGATGGGAAAGCCGTGTCGTACCGTATACGAAATGGTGTATTTCATGAAGTTGATGATTCTGGAGACGaatctgatgatgaaaatgttCTGATGATTGTTAATGAGAAGAAGAGAAAGAAGCGCGATCCGATGGTGGATATATCATGTATGCATTGTCCTGTAAAATACAGGTTCTTGTCCAAATTGAAGGATCATGTGAAGAAAGTGCACAATGttgatatttattattgtaaaATTTGTAAACTAATAACTGACAACAAAGATAATTATGAAGACCATCTAACAACTCACATCGGGGAGTACCAGTGCACTCAGTGCAACGCAGTATACCGGAGACAGGAATCGCTCATTGCACATATGAAGAGCCACGAGACATATGAGAAATATCAGCAAGACAATATgGCAAACGGTAATATCTGTGAGATATGTGGCGTGGTACTGGAGGACGAGGCGGCGTTAGAGGCGCACTGCGCGGAGCGACACGACAAGAAGTACACGTGTTACTACTGCGGCAGGATGTACAAGGGGCAGATGAGCTTCGAATTGCATATTGCGAAGCACGAGAAACTTCTCACTATTAAATCAAATCAGCAGCAAAGAATGCCCGACCCAAAATCAAAGCCAGAAAAATCAAAAGTGAAAGATAAAAAGCCAGATGAATCAGATTCCAGTAAGCGGTCCATCTGCGGAGTCTGCGGCAAGAGCTTCGTAGATGAACGTTCCTTGTTGTGGCACCAACGACTGCACGATAACGACCGACCGTTTGTTTGTGATATCTGTTCTCGCGGCTTCGTGTCGTTGAACCGTCGCAACCAGCACGCGGTGTGTGCGCATACGCCGCCGCGGCGCCGCTGTCCGCTGTGCCCCGCGCTGTTTCACCTCCGCTCTATGGTCAACACGCACCTTAAAAAGGTTCATTTAAACAAACAGCAGAAACGCAGGAACCGTGTCGCTAAACACACGAACGTGTTCTGGAGAACGGAGACCGTGCCCATTCAAGAACTCAGCGTGTCCATACAAAATGAAGTGTTGGAGATGCAGTCCACACAGGACCAAGACTGGGTAATTACATCATCAGCTGgatgtccaccgctggacatagccctTGGACTTTCCGGACAGCATGCATAG
Protein Sequence: MAEGLDLKAVVKHLANGSLGDNLCVVCLLPFTGDECENIFTSICKKDEEYCIADVLREVCQLKIQDTEHCKICCNCFSLASAAYKFYLQAKRSYEILNFYTDQLSSNIEDLDIAQEDGKRLLCIPLPVYTPETPGFDYGFDSIGSRKMGDDVEFDKDGTNIVSDKENDDEVIVIVKDGKAVSYRIRNGVFHEVDDSGDESDDENVLMIVNEKKRKKRDPMVDISCMHCPVKYRFLSKLKDHVKKVHNVDIYYCKICKLITDNKDNYEDHLTTHIGEYQCTQCNAVYRRQESLIAHMKSHETYEKYQQDNMANGNICEICGVVLEDEAALEAHCAERHDKKYTCYYCGRMYKGQMSFELHIAKHEKLLTIKSNQQQRMPDPKSKPEKSKVKDKKPDESDSSKRSICGVCGKSFVDERSLLWHQRLHDNDRPFVCDICSRGFVSLNRRNQHAVCAHTPPRRRCPLCPALFHLRSMVNTHLKKVHLNKQQKRRNRVAKHTNVFWRTETVPIQELSVSIQNEVLEMQSTQDQDWVITSSAGCPPLDIALGLSGQHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -