Basic Information

Insect: Epirrita christyi
Gene Symbol: -
Assembly: GCA_951392215.1
Location: OX595860.1:8985714-9010641[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00032 0.021 16.0 1.3 1 23 270 292 270 292 0.98

2 11 3 2e+02 3.4 0.4 1 23 299 321 299 321 0.94

3 11 0.11 7.2 8.0 1.4 1 23 325 348 325 348 0.98

4 11 0.08 5.4 8.4 3.7 2 23 356 377 355 378 0.94

5 11 2.7e-07 1.8e-05 25.6 0.6 2 23 384 405 384 405 0.98

6 11 0.00042 0.028 15.6 6.8 1 23 411 433 411 433 0.98

7 11 0.0016 0.11 13.8 1.9 1 21 439 459 439 464 0.93

8 11 0.018 1.2 10.4 0.1 1 23 472 495 472 495 0.96

9 11 1.1 72 4.9 0.7 1 23 501 523 501 523 0.97

10 11 3.3e-06 0.00022 22.2 1.3 1 23 533 555 533 555 0.98

11 11 0.0048 0.33 12.2 0.2 1 23 561 584 561 584 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00032	0.021	16.0	1.3	1	23	270	292	270	292	0.98
2	11	3	2e+02	3.4	0.4	1	23	299	321	299	321	0.94
3	11	0.11	7.2	8.0	1.4	1	23	325	348	325	348	0.98
4	11	0.08	5.4	8.4	3.7	2	23	356	377	355	378	0.94
5	11	2.7e-07	1.8e-05	25.6	0.6	2	23	384	405	384	405	0.98
6	11	0.00042	0.028	15.6	6.8	1	23	411	433	411	433	0.98
7	11	0.0016	0.11	13.8	1.9	1	21	439	459	439	464	0.93
8	11	0.018	1.2	10.4	0.1	1	23	472	495	472	495	0.96
9	11	1.1	72	4.9	0.7	1	23	501	523	501	523	0.97
10	11	3.3e-06	0.00022	22.2	1.3	1	23	533	555	533	555	0.98
11	11	0.0048	0.33	12.2	0.2	1	23	561	584	561	584	0.95

Sequence Information

Coding Sequence: atgGAAACTACGGAAGCTGACGCAGAAGAGTCTAAATTAAGCTTTGAAATTGAGAAACAGATCTGCAGATGCTGTCTTACCACAGAAAAACGAATGAAAAGTGCTGTCGAGGTACAGCAGTATTTCATGGAATTGGCTGGAATAAATGTTTCAGTGTCAGATGGTATCCCGCAGTGGGTATGCTTCGAGTGCAATGCGCTCATGCGTAAAGCTGTTACACTCAAGTACAAGATGTTGCGAGCTCACAGCATGCTTTATGAATACCTCATGCGATGCGCTCCGTTCTCCGTTGAACCCACGGACGCGGAACTCGCTCGGTACAGAACGCCGCATCTCACCGCTACGCACACACTCACCTTTGACTCCGGCAAGCCCAAGAATGGATACCATAGAGTATTACAGCATGAAAAGCATATTCTGAAATCCGAGCTGCACGAAGTGCCGTTACTGGCGACGTCGGAGCACCCTCGCGCGGAGGGCTTGGTCAAGGTGGAAGCTGCCGTTTCCGACCTCGAGGATGACCTGCCTTTGGAGGAATTTAGATCTGGAGGTAAAGAAGATGAACACATAGAAGAAGATGTAAAGAGTGAACCAGAATTAAAACGGAGAAAGAAGGACAAAGAACCAAAGAGcaggaaaaaaaagaaaatcagCCATGACCATTTGATGCCGATTCCACAAACAAAGAAGCATACCATCAGGAAACCCATTGAAATAGATCCTGAAAAAATACGACTCATCACTCTCAACCCTGAGGAGCAAATAAGACAGAGAGAGGAGGAGAGCAGGGCGCTGGTGAAATTTCCCTTCCAATGCGTGCTGTGCTACAAGGGTTTCAACTTTGAGTCCAAACTGCAGAACCACATGGCTAAGCACAGTCCGTCCCGAGGCCGGTATGAGTGTAAATTGTGCTCAATGTACCTGCCCACCATGTACTCGTACAGCGTGCACTCACTCATACACACGCGTCGCTACGAGTGTGTGCAGTGCGGACGCAGGATGATCGACCGCGCCTCCATCTACCATCACTACAGaaCACAACACGAAGGCATCACCACGGTAATCACATGTGATCTTTGCGGGAAAGTTTCAAGTAATAGTAAAACTCACCGAGGACACATGCGGAACCACCACTCGGGGGATCGGCCGAAGTGTGACCAGTGCGGCAAGTCTTTCGTCAACAAAGACTCGCTCACGGAGCATATGCAGATTCATGAAGGCGTGAAAAACTACGAGTGCTCCGTTTGCGGCAAGCGATGCCGCACGCGCACTCAGATGAAACACCACCAGCTCAAGCATACCAACATCAAGGAGTTCTACTGCGTGGAGTGTGATGTCAGATTCAAATCTGCACACAGTTTGCGACAGCATCTGACGAAGAGCTTGAAACACAAAGATGTCAATAGTTTTACttACGCGTGCGAACGCTGCGAGAAGCGTTTCGACACGGCGGCAGCGCGCGAGATGCACGCGCGCGTTCAGCACGACGGCGTGCGCGCGTTCCCGTGCCACGCGTGTGGCGCGAGCCTCGCCAGCCGTGCGAGCCACGCCAAGCACGCGCGCAGACACCTCGCCGGTCCCCCGCCCGCGGCTAAGCACGTGTGCGACACATGCGGCAAGGCCTTCCGGGGCAAAAGCGTCTTAACAAACCATCTGCGCACTCACACGGGCGAGAAGCCGTTTACGTGCGCGCTCTGCGGGCGCGGGTTCAGTCAGCGCACGGCGCGAGCCACGCACGTGAAGCTCGTGCACCTCAAGATACGCAGGAACAAGGTAAGTGCTAGCAACTCACACGGGCGAGAGCTAGCAATCACCTCGCACTCACACGGGCGAGAGCTAGCAATCACCTCGCACTCACACGGGCGAGAGCTAGCAATCACCTCGCACTCACACGGGCGAGAGCTAGCAATCACCTCGCACTCACACTGGCGAGAGCTAGCAATCACCTCGCACTCACACGAGCGAGAGCTAGCAATCACCTCGCACTCACACTGGCGAGAGCTAGCAACCACCTCGCACTCACACTGGCGAGAGCTAGCAATCACCTCGCACTCTCACGAGCGAGAGCTAGCAATCACCTCGCACTCAAACTGGCGAGAGCTAGCAATCACCTCGCACTCACACGGGCGAGAGCTAGCAATCACCTCGCACTCAAACGGGCGAGAGTTAGCAATCACCTCGCACTCAAACGGGCGAGAGCTAGGAATAATCACCTTACACTCACACGGGCGAGAAACCATTCACGCGATCAAGGACGAGGCGCCGCTCGCGACCGTCGAGCCGAAGCCCGACTTGTTCCCGAAGAACGAGCCGCAGCAGCTCGTGTACGACACGTGGGGCCGGCCTTGCGACGTGTTCTATGTCACCGCGGGGCCTTAG
Protein Sequence: METTEADAEESKLSFEIEKQICRCCLTTEKRMKSAVEVQQYFMELAGINVSVSDGIPQWVCFECNALMRKAVTLKYKMLRAHSMLYEYLMRCAPFSVEPTDAELARYRTPHLTATHTLTFDSGKPKNGYHRVLQHEKHILKSELHEVPLLATSEHPRAEGLVKVEAAVSDLEDDLPLEEFRSGGKEDEHIEEDVKSEPELKRRKKDKEPKSRKKKKISHDHLMPIPQTKKHTIRKPIEIDPEKIRLITLNPEEQIRQREEESRALVKFPFQCVLCYKGFNFESKLQNHMAKHSPSRGRYECKLCSMYLPTMYSYSVHSLIHTRRYECVQCGRRMIDRASIYHHYRTQHEGITTVITCDLCGKVSSNSKTHRGHMRNHHSGDRPKCDQCGKSFVNKDSLTEHMQIHEGVKNYECSVCGKRCRTRTQMKHHQLKHTNIKEFYCVECDVRFKSAHSLRQHLTKSLKHKDVNSFTYACERCEKRFDTAAAREMHARVQHDGVRAFPCHACGASLASRASHAKHARRHLAGPPPAAKHVCDTCGKAFRGKSVLTNHLRTHTGEKPFTCALCGRGFSQRTARATHVKLVHLKIRRNKVSASNSHGRELAITSHSHGRELAITSHSHGRELAITSHSHGRELAITSHSHWRELAITSHSHERELAITSHSHWRELATTSHSHWRELAITSHSHERELAITSHSNWRELAITSHSHGRELAITSHSNGRELAITSHSNGRELGIITLHSHGRETIHAIKDEAPLATVEPKPDLFPKNEPQQLVYDTWGRPCDVFYVTAGP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -