Echr001806.1
Basic Information
- Insect
- Epirrita christyi
- Gene Symbol
- HIVEP1
- Assembly
- GCA_951392215.1
- Location
- OX595834.1:11746743-11757099[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00021 0.014 16.5 0.6 1 23 147 169 147 169 0.98 2 8 0.00085 0.058 14.6 1.2 1 23 175 199 175 199 0.89 3 8 0.00064 0.043 15.0 0.1 1 21 425 445 425 446 0.95 4 8 3.5e-06 0.00024 22.1 2.0 1 23 1203 1225 1203 1225 0.99 5 8 9.7e-05 0.0066 17.6 3.5 1 23 1231 1255 1231 1255 0.92 6 8 1.4e-05 0.00093 20.3 0.9 2 23 1654 1675 1654 1675 0.97 7 8 0.00038 0.025 15.7 1.5 1 23 1681 1705 1681 1705 0.92 8 8 0.0052 0.36 12.1 2.4 1 23 1726 1750 1726 1750 0.93
Sequence Information
- Coding Sequence
- ATGCCGCTTACGCAAGAAAAACGTTTGGATAGCAATTTTTCCAACAATAATGACCACAGCTATCTTCATAAAAAGTTTAAGAAAATGGCAACTACCATTGCCGTGTTTCCACCGAATATTTCAATTGGTGGAGAAATCAGACAAAAGGAATCAAACATAGCACACAGTGCTTGCAGTGCTTCCATTTCTAATGGTAGTATTGCTGCTGCTCACCCAGAAATCGAGAAAATTAAAGAAGACCCGCAATATCTAGAAGCTCAACACGTGGAGAAAAATGTACAAACTAATTTTAGTGAAGAAAATTATAGAATAAGTAATGTAAATACTATCGTTCAAGTGTCTGGTCAGACCAGTTCAACTGATGAATTTTCGAATAAGACTGAGAATCTTGAAAATGATTATATCAGGGATACCCACAATGGAAATGTAGGTGGGCGTTACATATGCCCATATTGTAAATTATCTTGTGCCAAGCCTTCAGTACTTCAGAAACATATCAGAGCTCATACTAATGAGCGACCCTATCCCTGTGTTCCATGCGGATTTGCTTTTAAAACCAAATCAAATTTATATAAACATAGAAGATCCAGGACACACGCTCTGAGACTGCAAGGCGCAGATGTACCCGTAAATttaaatgatgatgacatgTCCGGTGGGTCTGAAAGCGATACATCTATGCCCCCAGCATCTATTTCAGAAGCTAGCTCTGAATTATCAAATGTGCGCCACGATAGCTATGAGTCAAATAGATTTTCGCCAAGCGAATCGCCGGAGTCTATGATTGAAGGTGTTTCTACCAACTTGTATTCTAATGACCACAGCAAATCAAAGAATATTTATAAACCTAAGTTCAGAGCAGCATTTTATCAAGAGATAGATGAAAAAGAAAAGTTCAAGAAATCCATTTCACCGAACGCTGATTTTCTTACAGAACATATCTCTAAAATTATATCGGATAATGAAGCTATTGTCGACGTTATAGAAACCCCGCTGCAGAAAAAATATGGTAAAATAAAGCAAATAGCAGAGAGCAAACAGTTTTTAAACGAAATAACTGATGTCCGAACTGATTTATCGCCGCTCAATTTAACgaaatataataatgaaactGAACATCCTTTTCGGAAACGATCTCATTCAGAAAGCTTTACACTTAATGATCAAAAGCACCCATTAAATCCTGAGGGATCGATCATAAAAGATCTTCTTCTGAAAAGTAAATTAAACGGTTTACTTCCGGTTACAAGTGAAATAATAGATGGATCTCTTTTTGTATGTCCTTTGTGCCAGATCATTTTCAGAAGTGCAGACAATTTAGAAACACATAGAATGTTCTACTGCAAAGGAAGCATCACACAAGTAAGTGCAAGTCAGAAAGAAATAAAGTTTGTCAGACATGAAAACATTTTCGTAAGAAGTAATTCCGTAAATGTTCGGTTTCCTGAGTCACCACAAATTAATAACACCTTCTCCAAATCTAATACTTCCAATAAGTCACAGCCATTAAGAATGAGACCAGAAAACCTTGTTATCATGAAACAAGAATGCAATGATATTATTGCACCTTTGCCATCTCCAGGCCCATTACTAGGCAACACGCGACTAGTAGACACAAGAGCGCCATCAGATTTTACCAGGAaaaatgaaaacattaaaataaagccCATACCTAGTCCAAAGAGACGAATTGACAGTAGATCCGATACATATAGCCCCAGATTGATGGAAAATATTTCACCAAGATCAGATTTTTACAACCAATCTAAAATTAGATGTATTGATGCCCATGCCGCAACACTTCGTGCAGTTGATGAAATGTCACAGCACATGAGACATAATAATACTACATCTCTTCAAATGTTTGGAGGTGAAGTAAAAATTGTTGATCATTCTGGAGGAACAACTACTCTACGCATTGAGCCAAACAAAAATCAGCTGTCCCCGATACTAATACATCAAAACCTTTCGCCATCTAAGCTTGCCAATGATGCAGAAGCAAGTAGTGTTGTTGTAAGATCAAGTTTGCATTCTGGTGGAACAATGGTCCATAATCCGCCTACCCCTAAAGAGACTATGGGAGCTCCACAACCGCAAACTCCAAGGATATCAATGTCATCCACTCCTGGTGTTTCAAGTTCAAACTTGCCGAATATCCACGATAGAACTCATTTTCAATTTCCTCCATTAAGTGCAATAACTGCATTCAATCCATTGACTTTGCCACCTTTAAGTCCATCAACATCTCCAAATGGACCTTCTACTATCTTGCATGGCGGAAAACTTATACCTCATGTTCCAGGAATTCCTGGACCAAACACACCAGGTATATTTGTAAGTCATCCAAATGCTCTTCCAAAAAATATTGGAACCAATGATATGAATAGAAGTTCTGTATCACAACCCATTCGCGAAGATTTTCATGGAAGTCTATTAGCTGCAAGCATTCAACATACAAAGGGAGCAGCATCCAGCCTAACTATACAACAGCTACGAAGCACAAGAAGTCCAAATAGAAGGCTAACTCATACTGAACCTGAGAAGCTAGTTTATAGCCATGATATTACCTCTGATGGTCAGCAATATACTCCGATCATACCtattattaaagtaaaaaatGTGGATGAGCCTAATACCACTTCAAGACATACTTTGCCAGGTATAACTAATCATACACACATACAAGAGGCAGCTATGAAAAGAAATTTTGAAGGTTTGCCAAAAACGCCGCATCTAAAAGTAAACATGCATTACGCTTCCAGCAAAAAGAGTAGAGAAAAAATTAGTAGTCCTTTACTAAAAACGGCTGACATCAAGTCGGAGAAGGATACAAGAAACTTTAATTTTgagaattttattacaaaagtaGAAATTTATAATAATCAAATACCCAGCTCTTCAGAAGTTCAAAAAAACACCAACGCTCAAGAAACTCCTTTTTCTATTCAGGACGAAAGATCtgaaacattttatttcaaGAAAAATGAATCAGTAAAAGTAAATGCTGATGACAGAAAACCAAAATTCTTAAGACCTTCGACACTTCCGTTGAAACCTGGTACGTTTACGCCTAAAAGACACCATGGCATAACGCCTACTGCAAATACGATGCCACTTGTGTCTCCTGAAACGCCGCGTCCTGCTAAAGCATATGGACAGCTATATTTGAATGGCAACGCTTACACTTACTTAGGATTGAAGTGTTCAACAAAAGTGTTTTATTGCACTATTAATCGTCCACAGCCAACTTATGTTCCAAATCAACACTTTCTATCCATGTACAGTAACTGGCAGTTATTATCTGAACTGACGCCAGACCCGCTGGGATTGTCAGCATCGTCTGCTATGTCTTTATATGACTCACGTCATCGACCGCAAACCGTGGCCGTCGCAGTGATTAAGCAGGATCTTATATTGACTCATTCATCGAAATGGAATACAATTTCAAAGGATGGCAAACAGATGATTCAGTCGTCCGACCACAAGAAAACAGAAGATAATAAAGGCATGTCTTCAGATAATATTATGACACCTAAGAAAGAATTAGCTGGTGGTTTTGAAAGTAATGAAGAGTACACATATGTACGCGGACGAGGGAGGGGGCGGTATGTTTGCTCAGAGTGTGGAATTCGTTGCAAAAAACCTTCAATGCTCAAGAAACACATTCGCACTCATACAGACGTCCGTCCATACACGTGTCTTCACTGCGCTTTCAGTTTTAAAACGAAGGGCAACCTGACCAAACACATGAAGAGCAAAGCACATTATAAGAAATGCTGTGAATTGGGGATAAATCCGAATGAAGGCAACGATTGTGAAAATGGAGAGATGACCCAGTGTTCAGGCGAGACGGACGATGATACTGATTCAGATGGTGATGAAGGAAATGAAGGAGAAACTGAATCAAGTGATACAGAAGCTTGTAAGTCACGATTACCAGAACACGAGGCAGCTCATTGCTTATTATCCCTGGGTAGTTCTAGACCGACCTCATCGGCGGCGCCAGGTTTGATAACTAGTGCCAGGCCTACTACATATCCGTACACACCCACCGGACTAGAAAATCCAACAATAGAAATTCCTGAACGCCGTTTTTCTAGAAGTGACTCCATTGAATCCGATGAAGATGCCGAAAATGAACCCATGGATTTAAGCAAAACTGACGTCAAAACTCCTACTTCCAGCATAACTGAAATTCCAACTGCCAGAGAATCAAGTGTGTTGGCGTCTTTAGCATCCAACACGGCGAAACTGCCAAATCATCAATCACAATGGTCAAATGGAGAACCAATGTTACACACATATTTGACGGAAAGAGCACTTttagattctaaaataaaacaaagtcaGTTAACTTGCAGCTTTagtaaattaagaaaaactgAGGCAAATTCCCAATTTGGTGAAAAATATAGAACCGAAGAAAACAATAAATGCGTAACGTCCACGACAAACAGTCTGGTTAAACCTATCACTACATCAAAAGTTATAGATGATATAAAAGATGCAGCAGTAAATGCGAATGACCTTCCTAAAGTAGGAAAAGAGGAACCTGTCACACCAAAGGAGTCTTCTGATTCAGTAAATACTAACGTAGAAATAAAACGCCACAATTTTCAAAATAGCACCAATACAGAAAATGCAAAACACGTGGTTTCCGAATACTTAAAACATGCTAGAATTAACTTAGTCAAAACACACGAAGGTCAGTTACAAAATCAGACCGAAACGACAGTTGAAGACAGTAacattgataaaattaatactGATGAAAGTGCTAAAATTGAGGTCGTAAGCGTGTCTGAATCGGATTCAGCAAAAATGCCTTCTTTGGACCATGAGCCAGTAGCAAGAAAAGTTGTGATTGGAGTCGGTGGTTTGGCTTTTAAGGTCACCAAAGGCAAGGATTTTGATAATGCATCTTACTCTCCAGGTCGTCTCATGGAAGATGGACGGAGGGTGTGTGACttttgcaataaaacatttactaAACCCTCACAGCTGCGACTGCATCTcaatatacattacatggaGAGACCGTTCAGGTGTAGTGTATGTGCAGTTAGTTTTAGAACACGGGGACATCTTCAGAAACATGAACGTTCAGGTTCTCACCATAATAAAGTTTCGATGACGTCAACATTTGGAGCGGCTACATCTTTCAACCCACGACCTTTCCGATGCTTAGACTGTAACATAGCTTTTAGGATACATGGCCACCTGGCGAAACATCTAAGAAGTAAAATGCACGTTATGCGTCTCGAGTGCCTGTTTAAACTGCCATTTGGAACGTTCACTGAAATCGAACGCGCAGGTGTCAGTTTAACTGACATAGATACGACCGATTGTGCGAGTTCTCTGGCCAGTTTGCAATCGCTTGCCCGGAAACTGCACGAGAATGACCCGACCAAGTTGGAATATAGAGAGTCCAGTGTTTCGATGGGAGTGGGACCTACAGTCAGCAAGGACTCCTCTGATGATGAGGATAATGGTTTGAACTGCGAAAATATGTGCGACAGTGAAAAAGAAAGTGAAGTGAAAACTGTTGATAACTTTGATCAGGATAATGAAACACGAGTTAATTATAGTGCCACAGATATTTAG
- Protein Sequence
- MPLTQEKRLDSNFSNNNDHSYLHKKFKKMATTIAVFPPNISIGGEIRQKESNIAHSACSASISNGSIAAAHPEIEKIKEDPQYLEAQHVEKNVQTNFSEENYRISNVNTIVQVSGQTSSTDEFSNKTENLENDYIRDTHNGNVGGRYICPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHRRSRTHALRLQGADVPVNLNDDDMSGGSESDTSMPPASISEASSELSNVRHDSYESNRFSPSESPESMIEGVSTNLYSNDHSKSKNIYKPKFRAAFYQEIDEKEKFKKSISPNADFLTEHISKIISDNEAIVDVIETPLQKKYGKIKQIAESKQFLNEITDVRTDLSPLNLTKYNNETEHPFRKRSHSESFTLNDQKHPLNPEGSIIKDLLLKSKLNGLLPVTSEIIDGSLFVCPLCQIIFRSADNLETHRMFYCKGSITQVSASQKEIKFVRHENIFVRSNSVNVRFPESPQINNTFSKSNTSNKSQPLRMRPENLVIMKQECNDIIAPLPSPGPLLGNTRLVDTRAPSDFTRKNENIKIKPIPSPKRRIDSRSDTYSPRLMENISPRSDFYNQSKIRCIDAHAATLRAVDEMSQHMRHNNTTSLQMFGGEVKIVDHSGGTTTLRIEPNKNQLSPILIHQNLSPSKLANDAEASSVVVRSSLHSGGTMVHNPPTPKETMGAPQPQTPRISMSSTPGVSSSNLPNIHDRTHFQFPPLSAITAFNPLTLPPLSPSTSPNGPSTILHGGKLIPHVPGIPGPNTPGIFVSHPNALPKNIGTNDMNRSSVSQPIREDFHGSLLAASIQHTKGAASSLTIQQLRSTRSPNRRLTHTEPEKLVYSHDITSDGQQYTPIIPIIKVKNVDEPNTTSRHTLPGITNHTHIQEAAMKRNFEGLPKTPHLKVNMHYASSKKSREKISSPLLKTADIKSEKDTRNFNFENFITKVEIYNNQIPSSSEVQKNTNAQETPFSIQDERSETFYFKKNESVKVNADDRKPKFLRPSTLPLKPGTFTPKRHHGITPTANTMPLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQTVAVAVIKQDLILTHSSKWNTISKDGKQMIQSSDHKKTEDNKGMSSDNIMTPKKELAGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCLHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGNDCENGEMTQCSGETDDDTDSDGDEGNEGETESSDTEACKSRLPEHEAAHCLLSLGSSRPTSSAAPGLITSARPTTYPYTPTGLENPTIEIPERRFSRSDSIESDEDAENEPMDLSKTDVKTPTSSITEIPTARESSVLASLASNTAKLPNHQSQWSNGEPMLHTYLTERALLDSKIKQSQLTCSFSKLRKTEANSQFGEKYRTEENNKCVTSTTNSLVKPITTSKVIDDIKDAAVNANDLPKVGKEEPVTPKESSDSVNTNVEIKRHNFQNSTNTENAKHVVSEYLKHARINLVKTHEGQLQNQTETTVEDSNIDKINTDESAKIEVVSVSESDSAKMPSLDHEPVARKVVIGVGGLAFKVTKGKDFDNASYSPGRLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSGSHHNKVSMTSTFGAATSFNPRPFRCLDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCASSLASLQSLARKLHENDPTKLEYRESSVSMGVGPTVSKDSSDDEDNGLNCENMCDSEKESEVKTVDNFDQDNETRVNYSATDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00361933;
- 90% Identity
- -
- 80% Identity
- -