Basic Information

Insect: Epirrita christyi
Gene Symbol: -
Assembly: GCA_951392215.1
Location: OX595860.1:3375483-3393604[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.24 16 6.9 0.0 7 23 2 18 2 18 0.97

2 14 0.012 0.82 11.0 0.9 3 23 25 46 23 46 0.96

3 14 0.0061 0.42 11.9 4.5 1 23 53 75 53 75 0.97

4 14 8.2e-06 0.00055 21.0 1.7 1 23 81 103 81 103 0.97

5 14 0.00056 0.038 15.2 5.4 1 23 109 131 109 131 0.99

6 14 0.00013 0.0086 17.2 0.3 1 23 138 161 138 161 0.94

7 14 0.00029 0.019 16.1 1.2 1 23 169 192 169 192 0.97

8 14 2.8e-05 0.0019 19.3 1.7 2 23 199 220 198 220 0.96

9 14 0.072 4.9 8.6 3.4 1 23 226 250 226 250 0.92

10 14 0.0002 0.014 16.6 3.2 1 23 256 279 256 279 0.95

11 14 0.00024 0.016 16.3 2.6 2 23 287 309 286 309 0.97

12 14 0.2 14 7.2 0.2 1 23 317 340 317 340 0.95

13 14 7 4.8e+02 2.3 1.2 2 20 347 367 346 371 0.89

14 14 0.014 0.97 10.8 4.2 1 23 1151 1173 1151 1173 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.24	16	6.9	0.0	7	23	2	18	2	18	0.97
2	14	0.012	0.82	11.0	0.9	3	23	25	46	23	46	0.96
3	14	0.0061	0.42	11.9	4.5	1	23	53	75	53	75	0.97
4	14	8.2e-06	0.00055	21.0	1.7	1	23	81	103	81	103	0.97
5	14	0.00056	0.038	15.2	5.4	1	23	109	131	109	131	0.99
6	14	0.00013	0.0086	17.2	0.3	1	23	138	161	138	161	0.94
7	14	0.00029	0.019	16.1	1.2	1	23	169	192	169	192	0.97
8	14	2.8e-05	0.0019	19.3	1.7	2	23	199	220	198	220	0.96
9	14	0.072	4.9	8.6	3.4	1	23	226	250	226	250	0.92
10	14	0.0002	0.014	16.6	3.2	1	23	256	279	256	279	0.95
11	14	0.00024	0.016	16.3	2.6	2	23	287	309	286	309	0.97
12	14	0.2	14	7.2	0.2	1	23	317	340	317	340	0.95
13	14	7	4.8e+02	2.3	1.2	2	20	347	367	346	371	0.89
14	14	0.014	0.97	10.8	4.2	1	23	1151	1173	1151	1173	0.98

Sequence Information

Coding Sequence: ATGGGAAAGGAATTTTCTAACAGAGGTCTCCTGGTCAGCCATCAGAACATCCACTCAACCAACATCTTTGGCTGTCCGCAATGCTCGTACCgaggcaaaacaaaaaaatatctctccCGGCACATCAAGCAAGTGCATAAAGAGATACCGGAGAAACACAAATGCAAATTCTGCGGGAAATTCTTTCTTCATCAGAGCGGTCTTAAAGTCCATGAAATGGTGCATACGGGTGTTAAGCCCCACAGCTGTAATGTCTGCGGGAAAACATTCAGAGTGACGTATTCTCTGAATtcacacatgcttattcacacaaatgagAAACCATTTCAATGTTCGTTCTGTTCATATGCGTGTCGCGACTCATCTACGCTACGGAAACACCAGAACAAGCATATGGGACTTGAGAAAATATACGAATGCAAGATTTGCAATAAAggttataAGAATAGAGCAGCATTCAAAATTCACATCGCGGAGACGCATTTAGACGTTGACATGAGAAAGTTCCCGTGTGACCGATGTGACAGAGTATTCAAGAATAATGCGCACAGGCAAATGCATATTAACTCCATCCACGAGCGTGCCCTGGTCTGCAATTGCCCGATATGCGGACGTCGTCTCATGAACAAAAATAACTTAACAGCACACTTGCGCACGCACCTCGATGAAAGACCATTCAGCTGCACGCACCATGGATGCTCATTGGCTTTCAAAGACAAGAATTCATTGACAAAACACAGCGTCATCCATAATCCTAAGCTCCACCACGCGTGCGCGTACTGCGGCCGCAAGTTCGTGCGTAAGACGCACGTGCAACGACACGAGCGCGTCATGCACGTCGAGAGGAAGCGCGGAGTCGAGTGCCACTATTGCGGGTCTAAATTCTACTCAAAGAACTACCTATTGAAGCATATACAAACGAAACATATATATAAGCAGAAATTTAAGTATATATGTGATATATGCGGACTGGTCACACACAACAAGCCCAGTATAGTGATGCATCTCAAGTACGGACACTCTAATGACAATGATATGCAATGCAAAATATGTGACTCCAAAATAGTGTACAAAAGACATATGTACCTGAAACTGCACTATTGGAAGACGCACAGCATCAGATACAAAATTACGAGGAAACCAACACGTACCAGAGCCATGATGAAAGCGAAAGAAGAGAAGGCCTCAGTTGAAATAAAAGTCGAGCCGATTGAAGCGGATTCGTACGAAGAGATACAACTTTTAGACGTGCATAAGAAGGAAACTGAAGATGACCCCAACGAATACGAGTCGCTGGACTATTCAAAACGCGTACTATCAGAAGATATCACCGAGTCAGCGTTACGCGACAGAGGTCATAACAAGGAGGTAGAGTTTGACGACTTCTTCATCAGACACGTGTTCTCCAAACAGGAGGCCACATCTGaagACGAAGTTAAGAACGATGGTGTTAACGAAGAGCAGAACCAAAGCGTGAAGCGTCGTATCAAACAGATCTTACTCCGATCTCAGAAACTAGAAAAAGCTAAGGTTTTACGTAATAAACGTAAATTGGAAGAGAAACTACAAAGAGAAAAGAAAAATCAAGAGGCGAAGTTAAAAGCGGAGAAGGAGAAACAGGAGTTAATCGAACTGAGAAGGGTGAGAGAGATGTACAATGAGAGAATGAAAGTCGCTGTTGCTAAGGAGAAAGAGAAAAAAGaacgaataaaaataaagtacttcAAAAAGAAACcagaatatttaaacaaaaccaAAACTGTAACTGaagaaaataatgatgaaaatactaaaaataatgatgaaaatgttgaaaatattaGTGTTGAAGCTGAAGCTGTATCTGAAAAATGTATCGAGACATCAACtgataaatatttgtcatataCTGAAGAAAATGATAGATCTTCTGAAAATCTCAGTAATTCTACTGTTAGTATTAAAACAGCTCAAGATGAAATATTAAATGATGATACAGTCTTCAAAAATTACACAGAATTCAATGATGATACAGTAATCGAagaacaaacagtacttaataatgaaacactacTCAGTGATGATACAGTAATCAACGATGAAACAGTACTCAATGATGATACAATACTCAATAATAATACAGTACGTAATGATGATACAAATCTTAAGTTTAATGATTCTAAAATGACTAGTACTGTAGCAGCCAATGATAATAATGAACTCAATGAAGAAAATGAAGTTGATAACAAtaaaatcacaaatgtcaaccAAATCTTTGCTAAAAATGATACACCGAGTAAAAAACATGGATCAAATGATATAACAGATATCTGTGCAAATATAGATATGCATGAAATAGATAAATCTGACAGTCAAGAAATTGATGATATTGTTACGGGTAATCTAATCGCTAACCATGGGAATGTCGAAAATTTTagttataatgaaaatgataaGCACAATCATGATGAAAATTGTGATAAAGAAATTGCTAAACATTGTATGAATATTGAAAATGAAATGGTTGATATACATCGAGATAAAAACGCATCTTGTAGTAATAAAACGACTGATCATGTTGATAATTCTAAAAATGATATGAACGATAATCCGTTTATTGGACCATTAGAAGAATATCCTACAAGTAATGATGTAACTATGGATGATGACGAACCTACATTTCCTAGTGATAATCATGAATGTACAACAATGAAAACTTGTGAATCTTTTGATCAACCACTACTAGAAAGGCGAGTAAAACGTGCAAGTAAGAGAAACATATCAAATTCCACAACCAATTATGATGAAAATGActcaaatgatgatgaaataccggatgatgatgatggtaacgAATCATGGAATGACAGTGATGACGATGTCAATGGCAGTGATAAAAATATCAATGAAAGTGGGAAAGCTAAGAAAATGGAATTCCAAACTTATCAATGCTATGTTTGTTTCAAGCTttaccaaacaaaacaaaaactaattgatCATTGTCAAGATCACTTTGACTTATGCAACGAACGAACCCTCACCAAATGTCCTATATGCAACCACGTCAGCCATAAAAGCATCGCGGAACATATGAAGAAAAAACACAAAGTAATTGTGAAAATACCTTTcaacaaaatacaacacaggAAGAACACTGAAGGTTCTAGATATTGTTACGATGTTAACGGCACTATAGTAGAAGTTATACCGAGCatcaaaatacttaataaaactgCCAGCGATGAGATAGATAAGAAAAGACGTGAGACAAAAGATAAAAGTATAGCTAAAACTAAACTTGTTAAGAAAGGAAACGAATGGATAATCGAGAAAGAGACTATTAATATTCAATTCGATGAAATACCCGAACTAACTGACATCGAACTACATAAATGTAAAGTTACCGATAATGATGTTGATAGATTAGGGCAGTTAAACTATCTGGCTAAGAAAAAGGGCCTTAAAATGATGTTTCCATgttttaaatgtgataagatCTGTCAGAATTTTAGCGCACTTAAACTACACAAAAGAAGGCATGAAGATAATCCTAAACCTTTTAAACCTAAAGTATATAAAAGATTCGCGAAACCGGAAGTTaagaaaaaagttaaactaaatacTGCTAATAGAATCGCGTTTCCTAAACCGATTTTGAACAAACACAAATGTGACGCGAAACTAAGGGAGTTTTACGAAACTAACATTAGAGGGGGGGATATAGAGTTTTGGcagtttttgaaaatatttaacaaaatggACCGAGAGAAAGTTAACGATTTCAAAGATTTGGAAGACAGGACCGATTTTGGGAACCATTTGGATTATTATAAAGATGTTGAAAAGCAAGATGAAATtgaatag
Protein Sequence: MGKEFSNRGLLVSHQNIHSTNIFGCPQCSYRGKTKKYLSRHIKQVHKEIPEKHKCKFCGKFFLHQSGLKVHEMVHTGVKPHSCNVCGKTFRVTYSLNSHMLIHTNEKPFQCSFCSYACRDSSTLRKHQNKHMGLEKIYECKICNKGYKNRAAFKIHIAETHLDVDMRKFPCDRCDRVFKNNAHRQMHINSIHERALVCNCPICGRRLMNKNNLTAHLRTHLDERPFSCTHHGCSLAFKDKNSLTKHSVIHNPKLHHACAYCGRKFVRKTHVQRHERVMHVERKRGVECHYCGSKFYSKNYLLKHIQTKHIYKQKFKYICDICGLVTHNKPSIVMHLKYGHSNDNDMQCKICDSKIVYKRHMYLKLHYWKTHSIRYKITRKPTRTRAMMKAKEEKASVEIKVEPIEADSYEEIQLLDVHKKETEDDPNEYESLDYSKRVLSEDITESALRDRGHNKEVEFDDFFIRHVFSKQEATSEDEVKNDGVNEEQNQSVKRRIKQILLRSQKLEKAKVLRNKRKLEEKLQREKKNQEAKLKAEKEKQELIELRRVREMYNERMKVAVAKEKEKKERIKIKYFKKKPEYLNKTKTVTEENNDENTKNNDENVENISVEAEAVSEKCIETSTDKYLSYTEENDRSSENLSNSTVSIKTAQDEILNDDTVFKNYTEFNDDTVIEEQTVLNNETLLSDDTVINDETVLNDDTILNNNTVRNDDTNLKFNDSKMTSTVAANDNNELNEENEVDNNKITNVNQIFAKNDTPSKKHGSNDITDICANIDMHEIDKSDSQEIDDIVTGNLIANHGNVENFSYNENDKHNHDENCDKEIAKHCMNIENEMVDIHRDKNASCSNKTTDHVDNSKNDMNDNPFIGPLEEYPTSNDVTMDDDEPTFPSDNHECTTMKTCESFDQPLLERRVKRASKRNISNSTTNYDENDSNDDEIPDDDDGNESWNDSDDDVNGSDKNINESGKAKKMEFQTYQCYVCFKLYQTKQKLIDHCQDHFDLCNERTLTKCPICNHVSHKSIAEHMKKKHKVIVKIPFNKIQHRKNTEGSRYCYDVNGTIVEVIPSIKILNKTASDEIDKKRRETKDKSIAKTKLVKKGNEWIIEKETINIQFDEIPELTDIELHKCKVTDNDVDRLGQLNYLAKKKGLKMMFPCFKCDKICQNFSALKLHKRRHEDNPKPFKPKVYKRFAKPEVKKKVKLNTANRIAFPKPILNKHKCDAKLREFYETNIRGGDIEFWQFLKIFNKMDREKVNDFKDLEDRTDFGNHLDYYKDVEKQDEIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -