Echr027159.2
Basic Information
- Insect
- Epirrita christyi
- Gene Symbol
- ZNF296
- Assembly
- GCA_951392215.1
- Location
- OX595863.1:7328147-7349640[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.04 2.7 9.3 0.1 3 23 144 164 142 164 0.96 2 14 0.00068 0.046 14.9 1.9 1 23 264 286 264 286 0.99 3 14 6.2e-05 0.0042 18.2 1.6 1 23 298 321 298 321 0.96 4 14 3.5 2.3e+02 3.3 5.9 1 23 326 349 326 349 0.93 5 14 1.3e-06 8.8e-05 23.5 2.8 3 23 589 609 588 609 0.98 6 14 0.00022 0.015 16.5 1.3 1 23 615 637 615 637 0.98 7 14 0.24 16 6.9 7.3 1 23 703 725 703 725 0.96 8 14 0.021 1.4 10.3 2.0 1 23 760 782 760 782 0.95 9 14 1.2e-05 0.00079 20.5 1.1 1 23 790 812 790 812 0.98 10 14 0.033 2.2 9.6 2.2 1 23 821 843 821 843 0.98 11 14 0.00012 0.008 17.3 0.7 3 23 903 923 902 923 0.98 12 14 0.014 0.98 10.7 5.6 1 23 940 962 940 962 0.97 13 14 2.4e-06 0.00016 22.6 0.7 1 23 968 990 968 990 0.98 14 14 0.001 0.069 14.4 5.5 1 23 996 1019 996 1019 0.98
Sequence Information
- Coding Sequence
- ATGGAGACCAACACCATGGATTCTGACCCGCTCAGTTCGTACGAAAATTACAATGCACCATACCAACCACCCTTTCATCCCCAACCTAACATCTCACCTGCACAACCTAACAACCCTTACCCATTCCCGAACAAAGATTACTACCCACCTAACTTACCATACAATCAGAACGTATCATGTAATGCTGAACAAGACGATAACGATACAGAAGGCCTTAGTAAAAGCCAAAATACCACGACAGACACTCAAAATGTTACCAATAATGATCAGAACGCAACCACAGAACAGACAAACACGAACGTAGAAGAAGAACAAGATATTAAACCGGATATAtcaaaaataaagattaaaagagtgaaaaagttgaaagggaGAACGAGTAACTACTGGAATAAGAAGGTAACTGATAAGGATTTTAAATTCTACGGATGTTCCGTCTGCAATATATCGTTTCAAGACTTAAAAGAGCTTGATGCGCATGTAACAGTGCATAGCAACCGTGTAACCAGTTACGATATACGGATCCAAAATCTAAAGAAgcgtaaacaaattaaaaaggataaaaaaaagaaaaaaaaggactCCAAAGTTAAGAGCGAATTTGAATTAGAGATCAAACCAGAAGATGGTTATGTGGGAACAGAGAAAGCTGCCGATTTCAATGGTCAAACTGATGTGAAAAATGAAGATGTTACGAAAGGAGAATTGGTTGATGTAAAAAATGATGTTAAAAGTGGTAATGGTGATGAGAAAATGGATAAGGAGATAGGGAATAAAAAAGATGAAGTGTACAAATGTTTTGCTTGCAACAAGAAATTTGCTCTGAGTTATTATTTGAAGATACATGTACGATCTCATACAGaTGAAAAGCCGTATGTATatgAAAAGCCATATGTTTGTAATTACTGCGGTCACACGTTTATAACTGCGAGTAAACTCGGGAGGCACAACAAGAGAATTCATCTTGCCATCCGTCACCAGTGTCGCATATGCTTCAAGTACTTTTTTCGATTTGAAGTTTTAACGAAACACTTCGACAAGAAACACGCTGATCAGAAGTTAGATGGGGAACCATACGATTACAACGCAATCCTACCATATCTTAATGAGTTAGAGGAACAATTCAAAATGCAGACAGAAACCAAGAAGCCGAAAACAGAGGACCCGTGGGGTGAATGGCCTAATAGTGCCCCTCCAGTGGCCACTGGCCTACCCAAGGTTGAGGATACTAAAGTTGAGAAGGAAGAAAAGAGGACCCCTTCGAGGGGTCTCTTGAGATCCCTGACCCCTCTAGACGCCGCTAGCCTGACCAAGGTTGAGGCTACTAAAGTTGAGAAGGAAGAAAAGACTACCCCTGAGAGGGGTCTCTCGGTACCCTTGACCCCTCTAGACGCCGCTAGCCTGACCAAGGTTGAGGCTACTAAAGTTGAGAAGGAAGAAAAGGAAAGTATTCCAACAAAATTCGAATTTGCTGCGAACACCACCTCGGAGCAGAAGATGGAGCAAGTGGAGATAAAGTGTGAGCTAGAGGACCCGGAAGTACCCCTGGAGCCGGAGCCGCAACCGGAGCCCGAGGTCTTCGACGACGTCTTCGAGCCGGATCCCTGCTCCTCGGACGATGATAGCGTTAAAGAAGAAAGGCACCCCCCTAcggatgatgaagatgaataCTTTCCCCCGGAAGGGTGGGCGCGTTCACCCCCTCCGGATTCGCCCCCCGCCCCCTCGTCCCCCCCAGCCCGTCGTAAAAGGGGGGTGGGCGCTTGCGAGCTGTGTCATAGGAGCTTTAGCAGTAGATCATATCTGAAAGTGCATATGAGAACACATACAGgtGAAAAGCCGTTCTCGTGTTACGTGTGTGGTCGCGGGTTCATAACTGCGAGTAAGATGCACCGACACGTGTTAACACACGATGAGACATGGGTCGgtgaaaataaaattaaaccggAAGGCTCTGATATCAAATCAGAAGTGGAAGATGATGACAGTGATggagaaaaaaaactaaaaagatcaaaattgaaaattgaaaaggCAAAAGTGAAGCTTTTGAAGAAACCAAATAAGAAAATGGATCCTAAATTGAAGAAAGGCAGAGTGCGGCCACATTGCTGCGAGTATTGTGATAAAAAGTTCCTGCATGTGGAAACACTTCAAGTGCACAAAAGATCTCATGAGGGAGAGGAACTAATCCTCAAATGCACCTTCTGCTTGGAACCACAACTTGACCAGCAGGCGAAGGTCGAGCACGAAGCAACGCACGCGGGACCGAAGCCCTATCTCTGCACGCTGTGCGGACGACACTACAAGGACAGAGGCGCCATGGTATACCACAGAAAAAATCACAAACCGAGCGACGAGAAACTCTTCATATGCGACATGTGTTCGAAGCGGTTCAATTCTCAGACCAAACTAGCTAGGCACATACTGACACACTCCAGCGAAAAATTCGTGCTTCGTTACGAGTGTCCAGTTTGTGCAAACATGTTCCACACTCGTTGGCATGTTCAAATGCATTTGAAGTCGCATCAGAAGGAAGGATTAATACTAGAAGAGAACAGAAACGCAGTCCTCGCCATGGTTCTTCAGAACGCAAGAAAAATCCCCAAAACCGACTCGCAGTCCACTCAGAACCTGAGCCAGAGCATGAGTCTGAGTCCCCCCTCGCTGCCGCTATTACCGCCCGGCGACGAGAGGTCCCGCATCTGCAATATATGCGGGGAGGTTTTCCAGCACTTCTACTATCTGGAGGAGCATCTGAAGACTCACGGCTCCAGGATAGCAGTCGAAGACCTGGATAAGGAAGAGGAGAAGAAATATACATGCCAGGTTTGCTCAAAATCCTTCAAACTACACTACTACTTAAAGCTACACAGCTTCACTCACACAAAGGAGAAGCCATTTATCTGCCAGCAGTGTGGCAAGGGCTTTATCACTAAGGGTAAACTTAAGAGGCACTTAGAGACACACCAGGGACTTAAGAAGTTTCAATGTCATATCTGCTGTAAATTCTTTACTCGACCGAGTTATATGAGGATCCATGTTCGGACCATACATGGAACTCAGGATTATAACTTTAGGGATTATGGGATAGGTGTTCCCGTAGGGTTAGGGGTCCCTTTAGGGCAGCTTACTGATAATagtatgtaa
- Protein Sequence
- METNTMDSDPLSSYENYNAPYQPPFHPQPNISPAQPNNPYPFPNKDYYPPNLPYNQNVSCNAEQDDNDTEGLSKSQNTTTDTQNVTNNDQNATTEQTNTNVEEEQDIKPDISKIKIKRVKKLKGRTSNYWNKKVTDKDFKFYGCSVCNISFQDLKELDAHVTVHSNRVTSYDIRIQNLKKRKQIKKDKKKKKKDSKVKSEFELEIKPEDGYVGTEKAADFNGQTDVKNEDVTKGELVDVKNDVKSGNGDEKMDKEIGNKKDEVYKCFACNKKFALSYYLKIHVRSHTDEKPYVYEKPYVCNYCGHTFITASKLGRHNKRIHLAIRHQCRICFKYFFRFEVLTKHFDKKHADQKLDGEPYDYNAILPYLNELEEQFKMQTETKKPKTEDPWGEWPNSAPPVATGLPKVEDTKVEKEEKRTPSRGLLRSLTPLDAASLTKVEATKVEKEEKTTPERGLSVPLTPLDAASLTKVEATKVEKEEKESIPTKFEFAANTTSEQKMEQVEIKCELEDPEVPLEPEPQPEPEVFDDVFEPDPCSSDDDSVKEERHPPTDDEDEYFPPEGWARSPPPDSPPAPSSPPARRKRGVGACELCHRSFSSRSYLKVHMRTHTGEKPFSCYVCGRGFITASKMHRHVLTHDETWVGENKIKPEGSDIKSEVEDDDSDGEKKLKRSKLKIEKAKVKLLKKPNKKMDPKLKKGRVRPHCCEYCDKKFLHVETLQVHKRSHEGEELILKCTFCLEPQLDQQAKVEHEATHAGPKPYLCTLCGRHYKDRGAMVYHRKNHKPSDEKLFICDMCSKRFNSQTKLARHILTHSSEKFVLRYECPVCANMFHTRWHVQMHLKSHQKEGLILEENRNAVLAMVLQNARKIPKTDSQSTQNLSQSMSLSPPSLPLLPPGDERSRICNICGEVFQHFYYLEEHLKTHGSRIAVEDLDKEEEKKYTCQVCSKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLETHQGLKKFQCHICCKFFTRPSYMRIHVRTIHGTQDYNFRDYGIGVPVGLGVPLGQLTDNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -