Echr013993.1
Basic Information
- Insect
- Epirrita christyi
- Gene Symbol
- Znf131
- Assembly
- GCA_951392215.1
- Location
- OX595847.1:15675272-15677002[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0081 0.55 11.5 1.5 2 23 170 191 169 191 0.97 2 13 3.2e-06 0.00022 22.2 3.4 1 23 197 219 197 219 0.98 3 13 0.52 35 5.9 0.8 5 23 254 272 252 272 0.86 4 13 2e-05 0.0014 19.7 2.1 1 23 278 301 278 301 0.96 5 13 8.1e-07 5.5e-05 24.1 1.3 1 23 309 331 309 331 0.98 6 13 0.0015 0.1 13.8 2.4 1 21 337 357 337 359 0.95 7 13 7e-06 0.00048 21.2 1.1 1 23 365 387 365 387 0.98 8 13 4.4e-05 0.003 18.7 0.8 1 23 393 415 393 415 0.97 9 13 5.6e-05 0.0038 18.3 0.1 1 23 421 444 421 444 0.96 10 13 0.0085 0.58 11.5 1.2 2 23 450 468 450 468 0.96 11 13 0.0057 0.38 12.0 2.0 1 21 474 494 474 497 0.90 12 13 0.022 1.5 10.2 0.2 1 23 503 528 503 528 0.92 13 13 0.036 2.5 9.5 3.1 1 23 534 557 534 557 0.97
Sequence Information
- Coding Sequence
- ATGGAGTCCAAAATATGTCGAGTGTGCCTCGACAGAACAGCCACAATATCTCTGTTCGACAAACTCGACAATATCCAGTACCGCGAGAAGATAATGAAGTGTGTTACTGTGATCATCGAGGAGGGTGACGGCCTCCCTGATGCTATCTGCGATAACTGCGCCTCCGAGCTCTCGGTCAGCTACGAGTTCGCACAGAAGTGCGAGGCCTCGGACCGAGCGCTGCGGTGTCTAGGCCTGCTCACTCCAGACCTAAAAGAAGAACAGCTCAAAACAGAAGTCAAGCTTGAACCTATCTCTAAAGATATGATCCCAGAATATGCGGATGAAGCCCTTGATTACGATGATTACATAGACAATTTGTCAGACTCAAAATATGACctagaaatcgaacccacaataGAAACTGAAGATAAAcataagaaaaaaagaaagctGCAAGAAAAGTATATGAAACCACTACCAAATCATTTGCGTAAGATCAAGCATAGAGTGTACTCTGGCCCTATTCAATGCATGATGTGCGGCAGAATACTCAAGTGTCAGTCTGCATATGAGCAGCACATGCGCACACACACCAAAGAGAAGCCCTTCAGTTGTGATCTCTGCAAGAAAAGCTTTCGAACTAAAAGCAGTATGAAATCACATATCAACAGACACTATGGAATTCACGAACTTGAACAGAGAAAACTAAGGCCACTACCTGATTGGGATGGAAGAAAAAAAGGAAATAAGTCCAAATCGTCACCCATACTGTGCATTATTTGTGGACTGAATGTGAATTGTCGTTCGGCTTTAGAAACGCACATGAGAAAACATACAGGAGATAAACCATTTACCTGTTCCGAGTGCAACAAGTGCTACACACTGAAAGGTTCTCTGATGAGGCACATAGAAGTAAACCACACTAAAGTCAGATCTTCTAGGTTTGTCTGTGAACACTGCGGCAAGAATTTTTATACAAAGAGCAACATTATTGTCCATCTGCGCATCCACACAGGAGAAAAGCCCTATTCTTGTCCGTTCTGCGAAGAGAAGTTTGTTCAGGTTTCCTCTCTGATTCGTCATAAACGATGCCACACCGGTGAAAAGCCGTTTACATGTCAAACATGTGCAAAGGCATTCCGAGACCGATCACTGCTGAACAAGCACCAGTCGGTACACAGTGAGGCTAGGGACTACATCTGCCACATTTGCAGCAAAGCTCTTAAAACCAAGCAAGCACTAAGAGCACACATAGACCGTCATAACAATCCCGGCAAATACATCTGCAATTTCTGTGGAATGGCCTTCACAGTCAAAGGCAACCTTAACTTACATGTTATAAGGATACATTCTGAAAAGTCAGGCACATGTACAGTCTGCCACAAGCCATTCCCGAATTTGCAGGTTCATATGAGAGTACATAACGGTGAGAAGCCGTACATTTGCAAGCTGTGCAATCAAGGGTTCATGACGCAGAGGAGCTTGTCCCACCACATTGGTTTCAAGCATAGAGATGCCGCTAAGTTTAAATGTACCACAGGGCAGTGTGACAAGGCTTTTCCTACAATATCCATGCTGGAGTTCCACGTCTTAAAGGCTCACCTGGACAATACTCCGTACATATGCCAGCACTGTGCCCGAGGCTTCCTGCGTCCGTGTGACCTCTCCCGCCATCTCAAAATGAACCACATGGACCACACTCGAGTCAAATCTCAATTCATCAAAACTGtacagatttctgatccatga
- Protein Sequence
- MESKICRVCLDRTATISLFDKLDNIQYREKIMKCVTVIIEEGDGLPDAICDNCASELSVSYEFAQKCEASDRALRCLGLLTPDLKEEQLKTEVKLEPISKDMIPEYADEALDYDDYIDNLSDSKYDLEIEPTIETEDKHKKKRKLQEKYMKPLPNHLRKIKHRVYSGPIQCMMCGRILKCQSAYEQHMRTHTKEKPFSCDLCKKSFRTKSSMKSHINRHYGIHELEQRKLRPLPDWDGRKKGNKSKSSPILCIICGLNVNCRSALETHMRKHTGDKPFTCSECNKCYTLKGSLMRHIEVNHTKVRSSRFVCEHCGKNFYTKSNIIVHLRIHTGEKPYSCPFCEEKFVQVSSLIRHKRCHTGEKPFTCQTCAKAFRDRSLLNKHQSVHSEARDYICHICSKALKTKQALRAHIDRHNNPGKYICNFCGMAFTVKGNLNLHVIRIHSEKSGTCTVCHKPFPNLQVHMRVHNGEKPYICKLCNQGFMTQRSLSHHIGFKHRDAAKFKCTTGQCDKAFPTISMLEFHVLKAHLDNTPYICQHCARGFLRPCDLSRHLKMNHMDHTRVKSQFIKTVQISDP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00811266; iTF_00361856; iTF_00377348; iTF_01171667; iTF_01170806; iTF_01183200;
- 90% Identity
- -
- 80% Identity
- -