Basic Information

Insect: Epirrita christyi
Gene Symbol: -
Assembly: GCA_951392215.1
Location: OX595852.1:14656808-14659061[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.36 24 6.3 1.6 2 23 4 25 3 25 0.93

2 14 0.53 36 5.8 1.0 3 23 77 97 75 97 0.95

3 14 4.6e-07 3.1e-05 24.9 1.2 2 23 186 207 186 207 0.97

4 14 4.1e-05 0.0028 18.8 0.1 5 23 219 238 217 238 0.95

5 14 0.019 1.3 10.4 1.1 1 23 244 266 244 266 0.95

6 14 0.0051 0.35 12.2 1.0 1 23 272 294 272 294 0.98

7 14 0.00056 0.038 15.2 0.3 1 17 299 315 299 316 0.92

8 14 0.015 0.99 10.7 0.8 1 23 449 471 449 471 0.96

9 14 0.00014 0.0097 17.0 0.2 2 23 478 500 477 500 0.93

10 14 3e-05 0.002 19.2 1.2 3 23 508 528 507 528 0.98

11 14 9.3e-08 6.3e-06 27.1 1.8 1 23 534 556 534 556 0.99

12 14 0.00029 0.02 16.1 0.1 1 23 562 584 562 584 0.97

13 14 0.68 46 5.5 0.0 6 20 594 608 593 611 0.94

14 14 0.0014 0.095 13.9 0.3 1 23 617 640 617 640 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.36	24	6.3	1.6	2	23	4	25	3	25	0.93
2	14	0.53	36	5.8	1.0	3	23	77	97	75	97	0.95
3	14	4.6e-07	3.1e-05	24.9	1.2	2	23	186	207	186	207	0.97
4	14	4.1e-05	0.0028	18.8	0.1	5	23	219	238	217	238	0.95
5	14	0.019	1.3	10.4	1.1	1	23	244	266	244	266	0.95
6	14	0.0051	0.35	12.2	1.0	1	23	272	294	272	294	0.98
7	14	0.00056	0.038	15.2	0.3	1	17	299	315	299	316	0.92
8	14	0.015	0.99	10.7	0.8	1	23	449	471	449	471	0.96
9	14	0.00014	0.0097	17.0	0.2	2	23	478	500	477	500	0.93
10	14	3e-05	0.002	19.2	1.2	3	23	508	528	507	528	0.98
11	14	9.3e-08	6.3e-06	27.1	1.8	1	23	534	556	534	556	0.99
12	14	0.00029	0.02	16.1	0.1	1	23	562	584	562	584	0.97
13	14	0.68	46	5.5	0.0	6	20	594	608	593	611	0.94
14	14	0.0014	0.095	13.9	0.3	1	23	617	640	617	640	0.97

Sequence Information

Coding Sequence: ATGGAGCTTGTCTGTCACAAATGCGACTTGAGAACTTCGAGCGACACCTTCGTCAAGCATTTGGAATCAAATCATGGGGACGTGAGGGACCAGGCTGCTGTAGAGGCATTTGTGAGAGACCACGTGACCTTCGAAGAGACGCTCGTGTCTGAATCTGATGGAGATGAGGCCTCAATTGTGTCTGTGGCGTCAATTGAAGCGTCTGACGTCATTAAACAACACTTGGACTGTCCCCTCTGTGCTAGCAAGTTTTCTACTCGCTTTCGATTTGTCCAGCACCTAACTAAGCATTCGGAAGTAAACCTTGACGACGGCATGTTGTGTCGACGCCACAGTGTCACTCGAAACGAGAATGAGCTTAGAAACCATTTGACCAGAAAACATAAAGATTCAGATCCTTTACAATGTAAAAACTATGACCACGTTGCTGCCGATACGCCCGCATTGAATGTGCAGATCACCCGCTGTCATACGGAGTCAAAATCCGATGTCACTACGAATATACGACCTAGTGCTCGCGGGCTGGGCGAAACCAATCAGAAACGTATACCAGCCGTCTGTCCCGATTGCAACCGCACCTTTTCTAACAAATACAATATGCTAAATCACATGAAAAGCCACGCTAAAGACGCCGAAATGTCCAAATTCAATTGTGAATGCGGGAAGAGTTATTCCACTCGCGGGAATTTGGTAGCACACATACGCATAGCGCACACTGAGGAGTTACCCCATAGGTGTTATGACTGTGGCGAGGGGTTTCCTTCTCGTTCTACTCGTGATATCCATTCTCGCTTACACTCTGGCGCACGCCCCTTCCCTTGCGCGTTTTGTCCATTATCCTTCCGTTCTAAGAACTCGCGAGATAAACATCAAGAGACGCACGCCCCGCCTCAGCATGAGTGCGAGCTTTGTGGTAAGAGGTTTCGAAGAAAAGCACATCTGAGCAGCGTCGAATCGCGTTGCGCGAAAATCAAGTTGGGACGTCCGTATGAAGACGAACCACTGTTGTATAGGTCCGCGGAGCCGCTGGCGTTCAAAGAAGAAGACTTGCCCGACAACGATTCAGATGATGACTCGGACTCGGCCCCGCTAGCTAAACTGGTTTCCGCCGACCCATTGGCTGCCCTGCGTCGAGCCTTGCGGGATCTCCGCGACCACTACAACGAGCGTCACTTGCGCTCCCACCCCGAGACCAGCTCTGAAGAAAGTGGGCCGGATGAAGGTGACCTCAATCCGGATAGATTCGATGACCTAACACGCCGTAATATGCGCCGTGACCGCTTTGACGACGCCACGCGGCAGGCACTCGACGCCGCGCGGGTGCGTGCCGACGGGCGGACATACTACGTGTGCATTATTTGCGGGCGTCGCCTCGCGTCACCGCATGCCTTTGTCCACCATACCAGGATTCATACAGGCGAGCGACCTCAAGTGTGTCATGTGTGCGGAAAGAGGTTCCGTGCTCCGCAGGGGTTAGCCCGACACATAGCGGAGACGCACGAGCGCCGTCGCCGGCGCGCCTGTCGACTCTGTCAGCGCACCTTTGCTAACGAGCAGAACCTTAGGCAACATCTTAGAACTCATACAGGCGAGCGTCCGTATCAATGTAACGAATGCGGTAAGCGGTTTGCCCAAAGCGGGTCGCTACACGCACACCGTCGAACTCATACGTTGCGTCGTGCATTTACCTGTGCTGATTGCGGAGCTGCCTTCCGCCTGCGCGCCGGTTTAACCCGCCACGCGTTACGTCACTCGGGTGAACGTCCGCACCGCTGCGCCTGTGGTCGCGCCTTTGCCGCCAAACACGAACTAATGGCGCATTTACCACTACACGGGGATCAGACTCCCCACGTGTGTGGTATATGTGGTGCAGCGTACAAGCTACGCCGTGCGTTACGGGACCATACCCGCCGCGTGCATCCGCCTCCCGCATCATCTGTTCTCCATACGGCTGACCTCACGCGAGCCTCCGCCTTTCCAGGGACGATGCCGATGTAG
Protein Sequence: MELVCHKCDLRTSSDTFVKHLESNHGDVRDQAAVEAFVRDHVTFEETLVSESDGDEASIVSVASIEASDVIKQHLDCPLCASKFSTRFRFVQHLTKHSEVNLDDGMLCRRHSVTRNENELRNHLTRKHKDSDPLQCKNYDHVAADTPALNVQITRCHTESKSDVTTNIRPSARGLGETNQKRIPAVCPDCNRTFSNKYNMLNHMKSHAKDAEMSKFNCECGKSYSTRGNLVAHIRIAHTEELPHRCYDCGEGFPSRSTRDIHSRLHSGARPFPCAFCPLSFRSKNSRDKHQETHAPPQHECELCGKRFRRKAHLSSVESRCAKIKLGRPYEDEPLLYRSAEPLAFKEEDLPDNDSDDDSDSAPLAKLVSADPLAALRRALRDLRDHYNERHLRSHPETSSEESGPDEGDLNPDRFDDLTRRNMRRDRFDDATRQALDAARVRADGRTYYVCIICGRRLASPHAFVHHTRIHTGERPQVCHVCGKRFRAPQGLARHIAETHERRRRRACRLCQRTFANEQNLRQHLRTHTGERPYQCNECGKRFAQSGSLHAHRRTHTLRRAFTCADCGAAFRLRAGLTRHALRHSGERPHRCACGRAFAAKHELMAHLPLHGDQTPHVCGICGAAYKLRRALRDHTRRVHPPPASSVLHTADLTRASAFPGTMPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -