Basic Information

Insect: Epirrita christyi
Gene Symbol: -
Assembly: GCA_951392215.1
Location: OX595857.1:1744877-1773932[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.9 1.3e+02 4.1 1.7 3 17 58 72 57 73 0.89

2 12 0.013 0.87 10.9 0.0 1 23 374 396 374 396 0.96

3 12 0.00017 0.012 16.8 0.5 1 23 409 431 409 431 0.96

4 12 8.6e-06 0.00059 20.9 3.6 1 23 437 459 437 459 0.99

5 12 2.4e-05 0.0016 19.5 1.7 1 23 466 488 466 488 0.99

6 12 0.00019 0.013 16.7 0.2 1 23 494 516 494 516 0.93

7 12 6.5e-06 0.00044 21.3 0.1 1 23 522 544 522 544 0.97

8 12 6.1e-05 0.0041 18.2 1.9 1 23 550 573 550 573 0.95

9 12 3.8e-06 0.00026 22.0 1.7 1 23 579 602 579 602 0.95

10 12 0.0023 0.16 13.3 4.1 2 23 609 630 608 630 0.97

11 12 3.5e-05 0.0024 19.0 1.1 1 23 636 658 636 658 0.97

12 12 0.017 1.2 10.5 0.0 1 21 664 684 664 688 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.9	1.3e+02	4.1	1.7	3	17	58	72	57	73	0.89
2	12	0.013	0.87	10.9	0.0	1	23	374	396	374	396	0.96
3	12	0.00017	0.012	16.8	0.5	1	23	409	431	409	431	0.96
4	12	8.6e-06	0.00059	20.9	3.6	1	23	437	459	437	459	0.99
5	12	2.4e-05	0.0016	19.5	1.7	1	23	466	488	466	488	0.99
6	12	0.00019	0.013	16.7	0.2	1	23	494	516	494	516	0.93
7	12	6.5e-06	0.00044	21.3	0.1	1	23	522	544	522	544	0.97
8	12	6.1e-05	0.0041	18.2	1.9	1	23	550	573	550	573	0.95
9	12	3.8e-06	0.00026	22.0	1.7	1	23	579	602	579	602	0.95
10	12	0.0023	0.16	13.3	4.1	2	23	609	630	608	630	0.97
11	12	3.5e-05	0.0024	19.0	1.1	1	23	636	658	636	658	0.97
12	12	0.017	1.2	10.5	0.0	1	21	664	684	664	688	0.91

Sequence Information

Coding Sequence: ATGACACAAACCTGCCTTGTCTGTGACACCCGTGAGCCGATTGGGAAGAGTTATATCGAAAATGTGTTTGATGAAAGTaatatGTTCCCTAGCGAACGAAAACTGTCTGAAACATTATGTGAAATCATTGACAAGCAATTGGATGAGGAGAGtgtacatacaaaaatattgtGCACAGAATGCCACAAAACCTGTGCAAACTATGAACAATACAAAACTCGTGTGTCCATTCTAAAGAAGAAACTATCTGATTTGTACTACACAACACAGGAGAAGGCTTTGTTCTCAGACTTGGCTGTCCTGGAGAAGGTCCAAGCTTCACCCAAGAAGGCGGCGAGAGaaaaatttgtAGTACCGGCTTCGAAATTACAACCAGTGCCGGCCGATTTTCAACTGAATTTAGGAAAAATTGCCGCCATGGCGAACTCTAAAGTGCAgGCACCAAAACCTCTATTAAACCTAAAAGTGACCATAGGAAACTCCGTCCTAACACAAAGTCTCACCACTTCAACGGTCAAAATGGTCAAGCCGATTGAGCTATCAAACGAAACAAACAGCATCAGCATTGGCGAATGGGACGTTAATAGCTTACCTAGCGAGATATTCTCAAACAATGAAAATGATGGAATTGATGTGGAAAATAATGAAATGGAAATTGAAGATACAATTATGGTGGACAGCAATAGTTCGATACTTCAAATGATGTCGGGGCAAAAACTAGTGTACGAGAATGGAGAACTATCACTGGTGATGGAcgaaaatgatgatgaagatgatgatgatgatttggatGAACAAGATTCAAACGACGAAGAATCTCAGATTGAGCTACAAGTGTCGGGGGACGAAGAAACAGCCAACGCTATCATCGCAGCTGCGCAAGAGCACGGTGGCGCTTTCATAAAGGTGGAAAGCGGTGAGATGTACCGCGTCAAGTCAGTTCAGAGCCATCCTTCAGACGCGATCTTGCCCGACACCGCGGCGCAGTTAGTAGCCAGAGACGGCGACCAGTACCGCTGTATTGTGTGTGACAATATGCGAGGGACAAACAAAAATACGTATAAGGGTGACGCTGCGGATATGGTCACACACATGAAGACCCAACACTCCGCCAAGGTCTACATATGTGGTCTATGTGGTATTGTTATGAGGAATAGATCTGAATACGCCACGCATATGGcgGAACACTCAAATAAACTTCCGCAGACCTCCAAATCCCGCTCCTACGATTGTGAAATATGCAAGAAAAGTTACAATTCTCGCACTCTGTTGCAAGAACATGCGAACTTGCATACGGGCGAACGGCCATATGAATGCCACATTTGTAATAAAACATTTGCATCGAAATATACAAGGCAGGCGCATTTGAAGACGCATCAGgatcgGCCGCGCCCCTTCAAGTGTAACACGTGCGGTAAATCCTTCCTGTCGCAACAGAACCTGATTCAACATGAGAAGACACATTTAGGAATCAAGAGTTTCATTTGTAATGTATGCAatAAAGCCTTCGGAACACAACATAGCTTAGAAGTGCATGGAGTTGTGCACAGCGGGCAGAAAACGCATATATGCGATATTTGTGAGAAAGCTTTTGCGAGGAGAGCTGAATTGGCAGACCATATAAGGATACATACAGGGGAGCGTCCGTTCGCGTGCGACGTGTGCAACGCCAAGTTCTCTCAGAGATCGAACCTGCACTCGCACAGGAGAGCCACTCACTTCGATGACAAGCGGCATACCTGTCCCGACTGTCCCAAACGGTTCAAAAGAAGAAGATTACTCCAATACCACATAAAGGCGGCGCACACCGGCGAGAGACCACTGAAATGTGAATTCTGTCACTCAACGTTCGTGTACCCCGAGCATTATAAGAAACACGTGCGGATACACAACGGCGAACGGCCGTATTACTGCGAGATATGCGGTAAAGCCTTCAATTCTCGGGACAATAGAAACACCCATCGCTTCGTGCATAGTGATAAGAAGCCCTACGAGTGTCTCGCTTGTGGCGCCTCCTATATGCGCAAACGTTTGCTCGTCGCCCATATGAACGCAAATGGTCATTTAGCTGAATCAATTGTAGTGAATCAGCCGAGAGTCACGCGGGTCAATGAAAACGTCTTCACGGACCAAGGAGAGGTTAAAGTATTGGATATAAACAAGGATGTGGAAGatAACGAGATCACAGCGAACTCTGAAGGTATTTCTACCATCGCAACTGTCAACTCGGAATCCTTACCACCACAGATAACTGACGAAAATGGCAGCATCCTACAGTTCATCCAAGTCAAAATGCCGGACGGGAAAGACGGCTGGGTCGCCCTCAATGATTGA
Protein Sequence: MTQTCLVCDTREPIGKSYIENVFDESNMFPSERKLSETLCEIIDKQLDEESVHTKILCTECHKTCANYEQYKTRVSILKKKLSDLYYTTQEKALFSDLAVLEKVQASPKKAAREKFVVPASKLQPVPADFQLNLGKIAAMANSKVQAPKPLLNLKVTIGNSVLTQSLTTSTVKMVKPIELSNETNSISIGEWDVNSLPSEIFSNNENDGIDVENNEMEIEDTIMVDSNSSILQMMSGQKLVYENGELSLVMDENDDEDDDDDLDEQDSNDEESQIELQVSGDEETANAIIAAAQEHGGAFIKVESGEMYRVKSVQSHPSDAILPDTAAQLVARDGDQYRCIVCDNMRGTNKNTYKGDAADMVTHMKTQHSAKVYICGLCGIVMRNRSEYATHMAEHSNKLPQTSKSRSYDCEICKKSYNSRTLLQEHANLHTGERPYECHICNKTFASKYTRQAHLKTHQDRPRPFKCNTCGKSFLSQQNLIQHEKTHLGIKSFICNVCNKAFGTQHSLEVHGVVHSGQKTHICDICEKAFARRAELADHIRIHTGERPFACDVCNAKFSQRSNLHSHRRATHFDDKRHTCPDCPKRFKRRRLLQYHIKAAHTGERPLKCEFCHSTFVYPEHYKKHVRIHNGERPYYCEICGKAFNSRDNRNTHRFVHSDKKPYECLACGASYMRKRLLVAHMNANGHLAESIVVNQPRVTRVNENVFTDQGEVKVLDINKDVEDNEITANSEGISTIATVNSESLPPQITDENGSILQFIQVKMPDGKDGWVALND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -