Basic Information

Insect: Epirrita christyi
Gene Symbol: -
Assembly: GCA_951392215.1
Location: OX595860.1:8979746-8981473[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.9e-06 0.00013 22.9 1.5 2 23 112 134 111 134 0.93

2 14 0.0011 0.073 14.3 3.4 2 23 141 163 140 163 0.94

3 14 0.0037 0.25 12.6 2.7 3 23 171 192 169 192 0.90

4 14 3.4e-06 0.00023 22.2 0.6 2 23 200 222 199 222 0.97

5 14 0.00014 0.0096 17.1 0.2 2 23 229 251 228 251 0.95

6 14 0.9 61 5.1 2.7 1 23 258 281 258 281 0.93

7 14 0.00033 0.022 15.9 1.8 3 23 289 310 288 310 0.95

8 14 2.4e-05 0.0016 19.5 1.4 1 23 323 346 323 346 0.97

9 14 8.5e-06 0.00058 20.9 0.3 3 23 363 384 362 384 0.95

10 14 2.1e-05 0.0014 19.7 0.7 2 23 390 412 390 412 0.97

11 14 0.088 6 8.3 3.1 2 23 420 442 419 442 0.92

12 14 7.5e-06 0.00051 21.1 1.6 1 23 447 469 447 469 0.97

13 14 0.0003 0.02 16.1 1.2 1 23 475 498 475 498 0.95

14 14 0.024 1.6 10.1 2.6 2 21 531 550 530 551 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.9e-06	0.00013	22.9	1.5	2	23	112	134	111	134	0.93
2	14	0.0011	0.073	14.3	3.4	2	23	141	163	140	163	0.94
3	14	0.0037	0.25	12.6	2.7	3	23	171	192	169	192	0.90
4	14	3.4e-06	0.00023	22.2	0.6	2	23	200	222	199	222	0.97
5	14	0.00014	0.0096	17.1	0.2	2	23	229	251	228	251	0.95
6	14	0.9	61	5.1	2.7	1	23	258	281	258	281	0.93
7	14	0.00033	0.022	15.9	1.8	3	23	289	310	288	310	0.95
8	14	2.4e-05	0.0016	19.5	1.4	1	23	323	346	323	346	0.97
9	14	8.5e-06	0.00058	20.9	0.3	3	23	363	384	362	384	0.95
10	14	2.1e-05	0.0014	19.7	0.7	2	23	390	412	390	412	0.97
11	14	0.088	6	8.3	3.1	2	23	420	442	419	442	0.92
12	14	7.5e-06	0.00051	21.1	1.6	1	23	447	469	447	469	0.97
13	14	0.0003	0.02	16.1	1.2	1	23	475	498	475	498	0.95
14	14	0.024	1.6	10.1	2.6	2	21	531	550	530	551	0.93

Sequence Information

Coding Sequence: ATGGAAGAAGTCTACATAAAAACAGAAGAAATTGTAATAGAAATCAAGCGAGAGGATACATCAGAACTTGAAAGTGAAGCCGGAAGGTCCACGgaatttttaaatgcaaatttaAAACAAGAAGTACCATTACTGACTCATGTCCTGATAAAAAACCctataaatgaatttgaaaacAATTGTAATGAACCTATCACAAATGAAACCAAACTTAATGCTAACATACCTGCAGATTTCAATTACTACAATGAGTTTTCTATACCTAGCTATTCTCATGAAAAACCATTGGAAGTTACCGGAAAGGTGTATGAAAACGGTAAAATAAACAGATTATCTTGTAATCTATGTGATAAAACATTCAAGAACAGAGCAAATCTAAAAAACCACTTAAAATTTGTGCATTCTGGCAACCTCGACGTTGAATGCACACTATGTTTCCGTACTTTCAAATCTCACGGTCATTTACGGTCTCATTTAGATTCGGTGCACGCTAAAACTGAAGAAGTCAACTGCCATATTTGCAATAAAGTATTCTTGAATCAGAAGAAACTAAAAAATCACATCTATTTCACTCATCCGCAGCCAGACGAGCAAGTGACATGTACAGTGTGCttgaaaatatataaatcaCAATACAATCTTAAAATTCACATGAGGACAGTACACCCGGAAGGTCAGTCCGTACCCTGTCCGCGCTGTGACAAAACTTTCAAAGTCGATATGCTGTTACAAAGGCATATTAAGTGGAGTCACCCTGACGATGGTATGGTCTACAAATGCCAACAATGCTTTAAAGTTATGCCGTCACTCGCTTGCTACAAAAAGCACGTTGAGAACACACACAATGTTTCATCGCGAGCAATGTGTGAACTTTGCAAGCGCATATTCAAAACTAAAAAGTCTCTAGATCGGCATCTTAAGAATGTGCACAATGGCAAAGAAGTCAAACCTTATATTCCTAGTAAATTCGTCTGTTCATACTGTGAAAGAACATTTGAAAGTAATACAACATTATTCTGGCATATACAGAAATACCATTTTGATGGTGTGTCCGTATGCGACACAGATACTTCCAATAATAACCATTGTGAGATTTGTGATAAATCTTACTCGGATAATGCAGCGTTACAGCGGCATCTGGCTTCTGTACACTCTTTGGAGACGGCTACATGCAAAGTATGTTTAAAAGAGTTTAAATCCGCCATCAACCTACAAAGTCATATGCGGATCACTCACGCACCACCAGAGGCTATACAAAGTTGCGATATTTGCAAGAAGACTTTTAAATGCGCTTTACACTTAAGAATGCATGTGAACGCTGTGCACACTGAAGGAGAATTTGCTTGTGATATTTGTAACAAAAGCTTTGCATCTCTTAAATATCTTAGTAAACATAAAAAGACACATATAGAAACTAGAGAACATCCTTGTGATGTGTGCGGGAAAATGTTCAAGACCCTGTTTGCTGCGAATAAGCACAGAAAAAACGTTCACAACGGTATTAAGTGCTGCTTCTGTCACTTAAAGCAAGCAAACTTAGACGAGCATTTACTAAAATGCCCTAAGAAAGAAAGTGATTCCAAGGGTTTAAGCTGTGTGAAATGTGGGTGTTGTTTCGAGAGTAATATAGAGTTGCATCAGCATATCTTAAGCTGTGGTTTTGAAGAAATCAATCCTATTGTTAAAATTGAAGAAGTTGAACAATCTGACGTTGAAATGGACagctaa
Protein Sequence: MEEVYIKTEEIVIEIKREDTSELESEAGRSTEFLNANLKQEVPLLTHVLIKNPINEFENNCNEPITNETKLNANIPADFNYYNEFSIPSYSHEKPLEVTGKVYENGKINRLSCNLCDKTFKNRANLKNHLKFVHSGNLDVECTLCFRTFKSHGHLRSHLDSVHAKTEEVNCHICNKVFLNQKKLKNHIYFTHPQPDEQVTCTVCLKIYKSQYNLKIHMRTVHPEGQSVPCPRCDKTFKVDMLLQRHIKWSHPDDGMVYKCQQCFKVMPSLACYKKHVENTHNVSSRAMCELCKRIFKTKKSLDRHLKNVHNGKEVKPYIPSKFVCSYCERTFESNTTLFWHIQKYHFDGVSVCDTDTSNNNHCEICDKSYSDNAALQRHLASVHSLETATCKVCLKEFKSAINLQSHMRITHAPPEAIQSCDICKKTFKCALHLRMHVNAVHTEGEFACDICNKSFASLKYLSKHKKTHIETREHPCDVCGKMFKTLFAANKHRKNVHNGIKCCFCHLKQANLDEHLLKCPKKESDSKGLSCVKCGCCFESNIELHQHILSCGFEEINPIVKIEEVEQSDVEMDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01100009;
90% Identity: -
80% Identity: -