Basic Information

Insect: Epirrita christyi
Gene Symbol: -
Assembly: GCA_951392215.1
Location: OX595863.1:3754199-3760009[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.24 16 6.9 0.4 3 23 13 33 12 33 0.96

2 25 0.012 0.82 11.0 0.3 2 23 56 77 55 77 0.97

3 25 0.023 1.6 10.1 0.1 1 23 81 103 81 103 0.95

4 25 0.011 0.78 11.1 0.2 1 23 108 131 108 131 0.90

5 25 0.021 1.4 10.2 0.2 1 23 207 230 207 230 0.95

6 25 0.076 5.2 8.5 0.9 1 23 318 340 318 340 0.93

7 25 6.2 4.2e+02 2.5 0.0 2 23 365 387 364 387 0.89

8 25 0.058 3.9 8.8 2.1 1 23 409 431 409 431 0.98

9 25 0.0036 0.25 12.6 0.2 1 23 435 457 435 457 0.96

10 25 0.021 1.4 10.3 0.5 3 23 464 485 462 485 0.94

11 25 0.094 6.4 8.2 2.1 1 23 491 514 491 514 0.97

12 25 0.77 52 5.3 0.4 1 12 520 531 520 534 0.88

13 25 0.24 16 6.9 0.0 1 23 572 594 572 594 0.94

14 25 2.2 1.5e+02 3.9 0.2 2 23 617 639 616 639 0.95

15 25 0.015 1 10.7 6.3 1 23 662 684 662 684 0.97

16 25 0.031 2.1 9.7 0.7 1 23 751 774 751 774 0.95

17 25 1.2 84 4.7 0.5 3 23 798 818 796 818 0.96

18 25 0.029 2 9.8 3.0 1 23 840 862 840 862 0.96

19 25 0.00022 0.015 16.5 0.7 1 23 866 888 866 888 0.98

20 25 0.0024 0.16 13.2 0.3 1 23 893 916 893 916 0.96

21 25 0.00061 0.041 15.1 2.0 1 23 922 945 922 945 0.97

22 25 0.13 9.2 7.7 4.0 1 21 952 972 952 975 0.95

23 25 0.00072 0.049 14.8 2.0 1 23 981 1003 981 1003 0.93

24 25 1.3e-06 9e-05 23.4 1.3 1 23 1009 1031 1009 1031 0.99

25 25 3.1e-06 0.00021 22.3 4.4 1 23 1037 1059 1037 1060 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.24	16	6.9	0.4	3	23	13	33	12	33	0.96
2	25	0.012	0.82	11.0	0.3	2	23	56	77	55	77	0.97
3	25	0.023	1.6	10.1	0.1	1	23	81	103	81	103	0.95
4	25	0.011	0.78	11.1	0.2	1	23	108	131	108	131	0.90
5	25	0.021	1.4	10.2	0.2	1	23	207	230	207	230	0.95
6	25	0.076	5.2	8.5	0.9	1	23	318	340	318	340	0.93
7	25	6.2	4.2e+02	2.5	0.0	2	23	365	387	364	387	0.89
8	25	0.058	3.9	8.8	2.1	1	23	409	431	409	431	0.98
9	25	0.0036	0.25	12.6	0.2	1	23	435	457	435	457	0.96
10	25	0.021	1.4	10.3	0.5	3	23	464	485	462	485	0.94
11	25	0.094	6.4	8.2	2.1	1	23	491	514	491	514	0.97
12	25	0.77	52	5.3	0.4	1	12	520	531	520	534	0.88
13	25	0.24	16	6.9	0.0	1	23	572	594	572	594	0.94
14	25	2.2	1.5e+02	3.9	0.2	2	23	617	639	616	639	0.95
15	25	0.015	1	10.7	6.3	1	23	662	684	662	684	0.97
16	25	0.031	2.1	9.7	0.7	1	23	751	774	751	774	0.95
17	25	1.2	84	4.7	0.5	3	23	798	818	796	818	0.96
18	25	0.029	2	9.8	3.0	1	23	840	862	840	862	0.96
19	25	0.00022	0.015	16.5	0.7	1	23	866	888	866	888	0.98
20	25	0.0024	0.16	13.2	0.3	1	23	893	916	893	916	0.96
21	25	0.00061	0.041	15.1	2.0	1	23	922	945	922	945	0.97
22	25	0.13	9.2	7.7	4.0	1	21	952	972	952	975	0.95
23	25	0.00072	0.049	14.8	2.0	1	23	981	1003	981	1003	0.93
24	25	1.3e-06	9e-05	23.4	1.3	1	23	1009	1031	1009	1031	0.99
25	25	3.1e-06	0.00021	22.3	4.4	1	23	1037	1059	1037	1060	0.95

Sequence Information

Coding Sequence: ATGCCTCTTATAAACGTGGATAGTACCGAGGCCATATGTTGCTACTGCTCCACCCCCTTCATAGATGTCGCTCAAATGCGCGAACACCTCATCCAACACGGATTCGAATTCGACACGAACCACCCGGACGGAGTTCTACCATTCTGCTTAGACAAAGAATCCTGGAAGTGCGTAATATGTGAAGAGAAATTTAACAATTTCCTGAAACTCTACGAGCATATGAACGTTCACTACCAGCATTATATATGCGCTACCTGCGGGAAGGGGTACATGACTGCCCCTCGGTTGCGGAAGCATTCCGAAGTGCATATATCTGGCTCGTTCTCATGCTCGGAGTGTGGCAGGGTGTTCACGATGCGCGCTGCAAGAGATTCGCACAAAGCGACAGCACACGCCAAAGgttCAGTTTGCGAAGTCCATTCAATAGTATGTGTGGCTAAAAATGGTAGACGTGTAAAGGAGAATGTTGGCGAACGACAGATGCGTAGGCGTCGACGTGCCAACAACGAGTTACCAGAAGAGTCGGAAAAACGAATCTTGAAGACGATGATGAGACGGAACGCCACCACGCTCCTAGAGTGTTCAACGGCGTGGGCTTTTCGATGGTTCCACGGCGCATTTTACTGCGCCTACTGTGATATCAAATTCGTCGATACACAACCTTTGAGAGAACACGTTATAAGTAACCATTTGAACGAACCACCGTCCCAAAGAGTTTTCTCAAAACTCAGAGAAAATAATATGGTCAAAATAGATATAGCTCAACTGCAATGTAGGCTCTGTGATGTCAGTCTCGGTGgaCTGAAAAAGGACGCAACAAATGCCAGCCAGTCAATTGACGCTCACAAGATCGTATGGAAGCGGAAACGAAAGTTGTTAGAAGACAAGGCCAATGCAGCTTTACTTATAAAGCATACGAACGCGGTCGTCTTCAGATGGCAAAGAGGAAAGTTTATGTGCGCTTACTGTCCTAAAATTTGCGCTAATTTTATTGAACTTCGATCACACTCGTCTGAACACAACAAGCTAGACATATTCGAGACAAATAAAACCCGTCTTCTCTTTCCTTTAAACATAGACATTTCAGATCTCGTTTGCAGTATTTGCAACATGCTGATCAATGGCATCGATGATTTAAAAAGCCATTTAAATGACGTTCATGCGGTAACAGTAAACCCTAATCACTCGGATGGTGTTATACCATTCCGTCTGACTGGACAGGAGTTTCGATGCGTTCGTTGCGAATTGAGGTTTGACAAATTTATGACCCTGTTCATCCACATGAACAAACATTATCCAAGTTTTGTTTGTGATTCATGTGGGAAGGCTTACTCCGGTGAGAACAAGCTTCGATCACATAAAGCGATACATGAATCTGGACGGTTTGGATGCACGCAATGTGATATGGTTTTCTCAAATCGCATTGCTAAGAATAGACATATCAGCGAGAAGCACCGGCCTAAAGACAGGTATCGCTGCCCTATATGCGATGAACACTTAAACTCTTACCACAGTCGATTGCTACATCTTAAAATGGCTCACGGAGAGTCGTCAGAGTACCGTTGCACTTATTGCCCAGCCGTTTTCAACAGTGGATCCACCGACCGGAGTTTTAAATGGATACCGAAGCGCAAGTTCCACGATCACAGAGACAATGCGGCCATTATTTTAGAATGTTCTAACATTTGTCCTTTTAGATGGCAGCGAGGCTTGTTTGTATGTGCTTACTGTTCTCTAACGTTCGCCGAGTTCGGACCTTTAAGGGAACATGTTATAGAGCACCCCAATAAAATTGAGGCTCTGCGGATTGTTGGTAAACATATTCTCAAAAGCGATATCACAGATTTAAAATGTGAACTCTGTCTTGCAAGTATAAAAGACCACAATGCGTTAGTTGAGCATCTAAAGAATGTGCACAAAAAGCCTCTTATCAACGACCTGGGTTTCGGCATAATCCCTTACCTGTTAATTACCGACGGGGACTACCACTGCACACACTGCACTGAAACTTTTAAACTCTTTACGACTTTGAATAATCATATGAATGACCACTACCCCAATTCAGTTTGCCCTCTCTGCGgaAAAAAGAACCCTATAGAAGACATTCAGGTAAAGATTGAAGTGGAAATCGAATCTGAAAAGCACTCCACGCTAAAAGATGCCGTAAACCGACGTGCCGCGTTCAGGAGTAACATAGCTACTATCCTGAGAACCAGCACCGCTTACCCCTTCAAATACAGGAATGGAGCGTATCTGTGTTACTTCTGTTCGACGACATTCATAGATCCGGAGAGGCTTCGCGATCATTTTCAAACCATACACTCTAAATTTATTCAGCCAGTAAAACCGAGCAAATGCGATTTTTTAAAGATGGACTTCGCTGATATTTTTTGCAAGCTTTGCAATGCAAAAATAGATGACTATGCTACTTTTAAGACACATTTGAAAGAACATGAATGTGGTTTAGACTTTACGTGGGGAGAAAGTGTCTTACCCTATAAGCTTAATAAAGAAGAGCATATATGTCAAGTGTGTGGGAAACGGTACGAATTGTTCCTAAGCCTCCACAGACACATGAACGAACACTACGAACATTATATCTGCGAGACATGTGGTAAAAGATTTGCGACATCGCAAAGGATGTTGACTCATGCGCGGACGCATGCAAGAGGTGTTTTCCCTTGCAGGAGATGCGAGGAAACCTTCGAATCGTCCTCGGCGCTATACAATCATGTGTCCAAAGTACACAAGATGAATAAGCGGTATAAATGTCCGATATGCGATGAGAAATTCGTCTCGTATAAACATAGGTTAAAACATCTAAGTTCGGTGCACGGAGAGAACACGGCGATTTTTCCTTGCCCGTCTTGCTCAAAAGTATTCACTATGTGCAGTCAGAGGTCCGCGCATATAAGGTGCCAGCATCTTCAGGAACGAAACCACATGTGTCCGATATGCGGAATGAAATTCTTCAAAAAATCCGAGCTCAAAATGCATTCTGTGAAACATGGCGGGGAGAGAATATACGAATGTGAAGTATGTAAGAAGGCGTACTCGAGAGCTCATACGCTGAAAGAACATATGCGAATACATAACAATGATAGGAGATTCATCTGCACGTACTGCAATAGCACCTTTGTGCAGAAAAGCAGCCTTAAAAGTCATATGAGGACGCACCATTCAAATCATTTGCCTGATGCAAAGCcaaaatga
Protein Sequence: MPLINVDSTEAICCYCSTPFIDVAQMREHLIQHGFEFDTNHPDGVLPFCLDKESWKCVICEEKFNNFLKLYEHMNVHYQHYICATCGKGYMTAPRLRKHSEVHISGSFSCSECGRVFTMRAARDSHKATAHAKGSVCEVHSIVCVAKNGRRVKENVGERQMRRRRRANNELPEESEKRILKTMMRRNATTLLECSTAWAFRWFHGAFYCAYCDIKFVDTQPLREHVISNHLNEPPSQRVFSKLRENNMVKIDIAQLQCRLCDVSLGGLKKDATNASQSIDAHKIVWKRKRKLLEDKANAALLIKHTNAVVFRWQRGKFMCAYCPKICANFIELRSHSSEHNKLDIFETNKTRLLFPLNIDISDLVCSICNMLINGIDDLKSHLNDVHAVTVNPNHSDGVIPFRLTGQEFRCVRCELRFDKFMTLFIHMNKHYPSFVCDSCGKAYSGENKLRSHKAIHESGRFGCTQCDMVFSNRIAKNRHISEKHRPKDRYRCPICDEHLNSYHSRLLHLKMAHGESSEYRCTYCPAVFNSGSTDRSFKWIPKRKFHDHRDNAAIILECSNICPFRWQRGLFVCAYCSLTFAEFGPLREHVIEHPNKIEALRIVGKHILKSDITDLKCELCLASIKDHNALVEHLKNVHKKPLINDLGFGIIPYLLITDGDYHCTHCTETFKLFTTLNNHMNDHYPNSVCPLCGKKNPIEDIQVKIEVEIESEKHSTLKDAVNRRAAFRSNIATILRTSTAYPFKYRNGAYLCYFCSTTFIDPERLRDHFQTIHSKFIQPVKPSKCDFLKMDFADIFCKLCNAKIDDYATFKTHLKEHECGLDFTWGESVLPYKLNKEEHICQVCGKRYELFLSLHRHMNEHYEHYICETCGKRFATSQRMLTHARTHARGVFPCRRCEETFESSSALYNHVSKVHKMNKRYKCPICDEKFVSYKHRLKHLSSVHGENTAIFPCPSCSKVFTMCSQRSAHIRCQHLQERNHMCPICGMKFFKKSELKMHSVKHGGERIYECEVCKKAYSRAHTLKEHMRIHNNDRRFICTYCNSTFVQKSSLKSHMRTHHSNHLPDAKPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -