Basic Information

Insect: Epirrita christyi
Gene Symbol: -
Assembly: GCA_951392215.1
Location: OX595860.1:2101063-2108282[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.3e-05 0.0023 19.0 0.5 1 23 164 186 164 186 0.98

2 11 3.6e-05 0.0025 18.9 1.7 2 23 191 212 190 212 0.96

3 11 3.3e-06 0.00023 22.2 2.2 1 23 218 240 218 240 0.98

4 11 2.5e-05 0.0017 19.4 1.3 1 23 245 267 245 267 0.98

5 11 0.00016 0.011 16.9 1.5 1 23 273 295 273 295 0.97

6 11 4.1e-05 0.0028 18.8 2.1 1 23 301 323 301 323 0.97

7 11 9.5e-06 0.00064 20.8 2.1 1 23 329 351 329 351 0.97

8 11 4.4e-06 0.0003 21.8 2.0 1 23 357 379 357 379 0.99

9 11 1.6e-05 0.0011 20.1 1.3 1 23 385 407 385 407 0.98

10 11 0.00029 0.02 16.1 0.9 2 23 457 478 457 478 0.97

11 11 0.00026 0.017 16.3 3.8 1 23 484 506 484 506 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.3e-05	0.0023	19.0	0.5	1	23	164	186	164	186	0.98
2	11	3.6e-05	0.0025	18.9	1.7	2	23	191	212	190	212	0.96
3	11	3.3e-06	0.00023	22.2	2.2	1	23	218	240	218	240	0.98
4	11	2.5e-05	0.0017	19.4	1.3	1	23	245	267	245	267	0.98
5	11	0.00016	0.011	16.9	1.5	1	23	273	295	273	295	0.97
6	11	4.1e-05	0.0028	18.8	2.1	1	23	301	323	301	323	0.97
7	11	9.5e-06	0.00064	20.8	2.1	1	23	329	351	329	351	0.97
8	11	4.4e-06	0.0003	21.8	2.0	1	23	357	379	357	379	0.99
9	11	1.6e-05	0.0011	20.1	1.3	1	23	385	407	385	407	0.98
10	11	0.00029	0.02	16.1	0.9	2	23	457	478	457	478	0.97
11	11	0.00026	0.017	16.3	3.8	1	23	484	506	484	506	0.98

Sequence Information

Coding Sequence: ATGTCTGCCTCCGAGTCTGTGTGCCGAGTTTGTCTCACCAGCGGTATCAGGATGCACAGCGTTGAAGACTTCCAACTCCTGGAAATATATGAAAAACTCACAAGTACTGAGCTCCACACAGAAGACGGGAGGCCTAGCACAATATGCTACATATGCTCCTCCCAGCTCGAGAGATGCCGTACATTCTCGGACATGGCTCAAAGATCAGAGAAATTCCTGAAAGATCTATTGCACAACAATGTAAAGgtaacaAACGAGACAGTTGCTACCCTTAACATAGGTTTGATACAAAAACTATCTGTAACCAAATTGAAATCTATATCTTACATAGATAGTTCATTAAATTTGTACGGAGTAGCTATTAAAGAAGAAAACACAAAAGAAGAATTTACTAAAACTGAGAGCAGATCTTTTAATGAAGATATTTtacataacaatataaaaaaagaaaacattgcTGCAATTAACACTGGCAATACAGATTTGTATTACAACTGTGAAGTATGCCAAgttaaattcaacacaaaaaaattactattagCACATCTGAGAATACACAATAAAGAAACGTACTGCAAAAAATGTAACAAATTATTCTCAAGCCCCAGTAACTTCAAAGGTCACATGACCATTCACaccggagaaaagccatatgcatGCCATATATGCAGCAGAACATTCCGACGAAAACCTTATTTAACAGGTCATATAAGGATGCATACCGAAAAGCCATATTTCTGCAGTAGCTGTAATACAGCCTTCACAGAtgttgataaattaaataaacatatgCAAACTCATACCACATACAAACCATATGCCTGCAGTATATGCAGTATGAAGTTTATATATGGAAGTTCTTTAAAAAGACATATGCATAtacatactggagaaaagccatttgcctgcaacagatgtgatatgACATTCAATGTTCAATGTGGGTTAACAAAACACATGCGAATTCATACAGGcgaaaagccatatgcctgcaacaAATGTAATGCAGCCTTTACTCATGCTGGAAATTTAAAAAGACATTTGCACATACACACAGAAGAAAAGCTATATACTTGCAACAGATGTAATAAAAAGTTCACTGAAGAAAATACTCTTAAAGTACACATGcgaattcacactggagaaaagccatatgcttgcgaCAGGTGCGAAATGAGATTCACTTTTAACAGTACCCTGACGAAACACATGCAAGTTCACGACGAGGAAAAACAGTTGATACTTAGTGAAACTAGCGGTCATGTAGTTCTTGGAGAAACTAGCGGTCATATAACACTTGGGGAAACTAGCGGTCATATAACACTTGGGGAAAACATTGAGAAAGAACCATCCCGCAGAAAAAAACCCGAATGCCCAGTATGCAAAAAGAAACAGTACAGCAACTCACAATTAAAAGAACATATGAgaattcatactggagaaaggCCATATGTCTGTGAATTGTGCAGCAAAACTTGCAGGACAAAAACGCTTTTAAAAGAACATAAAAAAGTTCACACCGGAGAAAAGCGGCCCGGGTGTGAAGTGAACGTTGCGGCGGTGGCATCCGTCGTGGCGTGGGATTGA
Protein Sequence: MSASESVCRVCLTSGIRMHSVEDFQLLEIYEKLTSTELHTEDGRPSTICYICSSQLERCRTFSDMAQRSEKFLKDLLHNNVKVTNETVATLNIGLIQKLSVTKLKSISYIDSSLNLYGVAIKEENTKEEFTKTESRSFNEDILHNNIKKENIAAINTGNTDLYYNCEVCQVKFNTKKLLLAHLRIHNKETYCKKCNKLFSSPSNFKGHMTIHTGEKPYACHICSRTFRRKPYLTGHIRMHTEKPYFCSSCNTAFTDVDKLNKHMQTHTTYKPYACSICSMKFIYGSSLKRHMHIHTGEKPFACNRCDMTFNVQCGLTKHMRIHTGEKPYACNKCNAAFTHAGNLKRHLHIHTEEKLYTCNRCNKKFTEENTLKVHMRIHTGEKPYACDRCEMRFTFNSTLTKHMQVHDEEKQLILSETSGHVVLGETSGHITLGETSGHITLGENIEKEPSRRKKPECPVCKKKQYSNSQLKEHMRIHTGERPYVCELCSKTCRTKTLLKEHKKVHTGEKRPGCEVNVAAVASVVAWD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -