Echr011038.2
Basic Information
- Insect
- Epirrita christyi
- Gene Symbol
- -
- Assembly
- GCA_951392215.1
- Location
- OX595844.1:9087679-9090136[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-08 4.8e-05 23.7 0.0 1 40 19 58 19 61 0.92 2 2 7.1 8.7e+03 -2.7 0.0 14 22 143 150 137 150 0.66
Sequence Information
- Coding Sequence
- atgccccGTAAATACAAGCGTAAAGCCGGCGTCCAACCGCGTGTCATTACTTGGACCGAGGACACATTGGCTGCAGCTATAGCAGAAATGCAAGATGAACGACTTAGTGTGAATGATATAGCAAAAAATCACGGAATACCATCTAGAACGTTACGTCGCCGGTTTGCTACACAAAATCAGAAAATAATACCATTAGGAAAACATCCAACTCTTGGATTCGAAAATGAACGTCGGCTGGTCGCTCATATTCAGAGGCTAGAACGATCCGGGTTTCCTCCTGACAGAAAAACTGTTCGCGCCTTAGCTTATCAATTTGCAGAAAAGTTAAtgataaaacataattttaacacAGAGAAAAAATTGGCTGGAACTGATTGGCTTCAGAGCTTTTTAGAAAGGAACCCTATTTTATCTATTAGACAAGCTGAAGGTCTCTCAGTCTCACGTGCATTGGCTCTAAACAAGGAAGAAATCAATGGCTTCTATGACTTACTAACAAAAGTTCTAGAAGAAAATGACCTTTTGGACAAGCCAGATCGACTTTTTAACATGGACGAGACTGGAGTTCAAATGAACAACAAAGTAGGTAAAGTTCTAGCTACTAAAGGAACGAGATCTGTTCACTCTATAACTTCGGGTGAAAAAGGTGAAACACTGACGGTCGTAGCTTGCTGCAATGCAGTGGGTAATTTTCTCCCTCCAGTTGTGATAATCAAAGGAGTTCATAAAAAAGATGAATTTATGGACGGTCTACCTCCTGGTTCAAAAGtctttatgaataaaaaatctgCCTATATCAATGCAGAGTTATTTCTAAAATGGCTGAGGGAGCATTTTATCCCAATGAAACCTCAGGGAAAAGTTTTGCTCATTTTGGACGGCCACAGCTCACATTCTTCTGCCGTTGATATGCTAGAAATAGCAAAGGATAATGACATTATTCTTCTTTGCTTACCCAGCCATACAACTTCTGCACTCCAACCTCTAGACAGAGCGGTGTTTAAGCCATTCAAAACCTTCTTTACTGCTGAAACTAATCTCCATATGCGAACAAACCCACAGAAAAGGATCAACCGTCAACAGTCTGGAAAACTGATTGGAAGAGCATGGATTAGAGCAACAACTCCCGCCAACGCCATAGCAGGGTTTAGAGGCAGTGGAATATATCCACTTAATTATAACGCTATACCAgaaaatgaatttttgatagAAAACAATGCAgacacaacaaataaaaatcaagTTGAAATTCCGAGCACCTCAAATACCACACCAGATATCCGTGACTGTGTCTCCCCGAGTATCATTGATGATTATAATCTTGAAATACAAAGTCGGCCAGGAATGAGCCTACAGAGACCACTTATTGATTTATCAGAACCAGTTGAGGTGGCAAGTGATTCTGTTGTTACAGACAATACAGCAGTTACGGCAAATGAAAACAATCCGGAACCTACAGATAATTTGGTAGATGCAGACAATCCGGCCGCTACAAATAATATAGTAGATGCAGGCAATCCGTCAGCTATTGGTGATATTGCTTCTTCTACGGAAAAAGAAACACCATCGAAACTGCTTTATGAATCATTACCAATTCCTACCCTTCCGACACCCTTTTCAAAAAGGGGTAAACAAGGTGCTGCAGTACTGAATACCGAATCCAAAATAATGgagaaaaaaaaaggtaaagctACAAAAGGGATACCAGTGAAAAGAACTAAAAAAGACCAGCAAGAGGATACAGAAAAAGTTGATTTGAAAAGAACCAGAGCAAAGaagcaaaatataaaaaaatcacgTGGTTATAAGTCAAGCGATACAGATATTACTGAAGATAGTAATGAAAGTgacaaaaatgaaaaagaaaataacaaaaataatagcgATGAAAAACAACGAAAAGATAAAGTCAGAATCAAAAGAAAACCCAGGAAACGAGCAGTTATGAATGTTTACAGTTCTAGTGAAGATGATAATAAAGAGAATGCGAACAGTAGTTTTGAAGttgaagtaataaaaaaacaaaagaaaatgacagaaaaacacgaaaaaatttCTTCCAAAACCAAAGAAACATCCAAAAAGGCAAAGCCTGTTCTAATATATAGTTCtaatgatgaaaataatggaGATGATGAGAATCTAGATGAGGATCATTGCGTGGAATGTCTTGATTATTATAGTAGCACCAAATCCAAAGTAGATTGGATCCGTTGTGTTATGTGCCGAAACTGGCTTCATGAATCATGCACATTATATCGCAATTATTGCAACAAATGTGGGCGAATGAAGATAATTGCTGCCAAAATGGCTAAATAG
- Protein Sequence
- MPRKYKRKAGVQPRVITWTEDTLAAAIAEMQDERLSVNDIAKNHGIPSRTLRRRFATQNQKIIPLGKHPTLGFENERRLVAHIQRLERSGFPPDRKTVRALAYQFAEKLMIKHNFNTEKKLAGTDWLQSFLERNPILSIRQAEGLSVSRALALNKEEINGFYDLLTKVLEENDLLDKPDRLFNMDETGVQMNNKVGKVLATKGTRSVHSITSGEKGETLTVVACCNAVGNFLPPVVIIKGVHKKDEFMDGLPPGSKVFMNKKSAYINAELFLKWLREHFIPMKPQGKVLLILDGHSSHSSAVDMLEIAKDNDIILLCLPSHTTSALQPLDRAVFKPFKTFFTAETNLHMRTNPQKRINRQQSGKLIGRAWIRATTPANAIAGFRGSGIYPLNYNAIPENEFLIENNADTTNKNQVEIPSTSNTTPDIRDCVSPSIIDDYNLEIQSRPGMSLQRPLIDLSEPVEVASDSVVTDNTAVTANENNPEPTDNLVDADNPAATNNIVDAGNPSAIGDIASSTEKETPSKLLYESLPIPTLPTPFSKRGKQGAAVLNTESKIMEKKKGKATKGIPVKRTKKDQQEDTEKVDLKRTRAKKQNIKKSRGYKSSDTDITEDSNESDKNEKENNKNNSDEKQRKDKVRIKRKPRKRAVMNVYSSSEDDNKENANSSFEVEVIKKQKKMTEKHEKISSKTKETSKKAKPVLIYSSNDENNGDDENLDEDHCVECLDYYSSTKSKVDWIRCVMCRNWLHESCTLYRNYCNKCGRMKIIAAKMAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -