Basic Information

Insect: Epirrhoe tristata
Gene Symbol: -
Assembly: GCA_951394285.1
Location: OX596158.1:7051268-7060573[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00012 0.008 17.0 1.7 1 23 304 327 304 327 0.96

2 10 0.3 20 6.3 7.0 1 23 334 356 334 356 0.97

3 10 8 5.4e+02 1.8 0.1 1 11 360 370 360 378 0.84

4 10 0.00024 0.016 16.1 4.4 2 23 388 409 387 409 0.97

5 10 0.0012 0.083 13.8 0.2 1 23 413 436 413 436 0.97

6 10 0.15 10 7.3 0.2 2 19 450 467 449 469 0.92

7 10 0.0091 0.61 11.1 1.5 6 23 506 524 502 524 0.93

8 10 0.0017 0.12 13.4 0.0 2 23 543 564 542 564 0.97

9 10 5.8e-05 0.0039 18.0 1.1 1 23 570 592 570 592 0.99

10 10 2.8e-06 0.00019 22.2 2.8 1 23 598 620 598 620 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00012	0.008	17.0	1.7	1	23	304	327	304	327	0.96
2	10	0.3	20	6.3	7.0	1	23	334	356	334	356	0.97
3	10	8	5.4e+02	1.8	0.1	1	11	360	370	360	378	0.84
4	10	0.00024	0.016	16.1	4.4	2	23	388	409	387	409	0.97
5	10	0.0012	0.083	13.8	0.2	1	23	413	436	413	436	0.97
6	10	0.15	10	7.3	0.2	2	19	450	467	449	469	0.92
7	10	0.0091	0.61	11.1	1.5	6	23	506	524	502	524	0.93
8	10	0.0017	0.12	13.4	0.0	2	23	543	564	542	564	0.97
9	10	5.8e-05	0.0039	18.0	1.1	1	23	570	592	570	592	0.99
10	10	2.8e-06	0.00019	22.2	2.8	1	23	598	620	598	620	0.98

Sequence Information

Coding Sequence: ATGCCTGAGGTCAAACTATGCCGGATATGTGTGCGAAGTGGTGTGAAAATGTATGAACATGATAGGTTTCAGTTGATGTCGttttacaaagaaattaccggccccaaaATACCAAATAAAGATTGCTTACcaaaactgttttgttttgagtGTGCAGCCCTTCTGCACAAATTCCATGAATTCAAAAAGAAATGTCTGTATGGACAGAAAGTATTCAAAAATCTGGAAACAGGATGTACAAGCTTAGATGacacaaaaatcaaaatcattcCTTTAGAACCACAATTGAAAATTCTATCAGAGTCACCAAACATCAAGACATACACAGTCAAACACAGTAAAATtgttaaaactattaaaagaaaatacaacACATTTACTGAAGTTTTTCTTGATGACGTCAAATCTGATATTGAAACAgattattcaaaagttttagCAGACAAATTTTCTAGAACtgttaaagaaaatattgcaGAAGATATTGAGcaagtaaaagaaaatatcGAATTGCAAGATGatgattttaatgattttgaaGATTCCACTGATACCACACCATTTGTTATAGCTGAAAATCATGTAAAAGATGAAAGTAACATAGAACAAACATTAGTTAATGGAAGCTTGAATGAAACAGAtacaaaaagaacaaaatataCGCTAAAAACAAGCCATGATATAGCAAGCCATAATACACAAGAAACAAGCCATGAAAAAACAGAAACAAAGTATCAGAATGGATCAACAGTAATTGACGATAAAACGAATTTGGATAACAAATTCCAAAGATCAGTGAAGAAGAAGTTTCTTGACGAAAATCATTGGACAAAGATCACTTTGACAGATGAGGAAGCCTCAAGGAGGTTTCAGGCAAAAGCACTTGAACACAAGTACTTGACATCTGATTATAAGTGTGTGGATTGCTATAGAACGTTTTCTCAAGAAGATATGATGAAGCGACATGTTAAATTGAGACATTGTGAGtcGCTGGGTCCTCACGAGTGCCGACATTGTCGAATGCGCTTTAAGTGGAAATCTCGACTTCAGAAGCATTTGAAAGAACACTATACTATCTACAAATGCCTGAGATGCGAACTTTCGTTTCCTGTTGAAATATCAGCATTTCAGCATGATTATTCTCACAATGGTGTTACTTGGACGTGCGCGCATTGTGGACAAGGCTTTAGGCATAGTTCAACATACTACACTCATCTACGGAAACATAAGAGTAAATACGTGTGCGCACTATGCGGCGTGTCTTTTGTGAGTGAATTCGGACTGTTCATGCATAAGCGAGTCAAACACGTTATAAGTGAGGACGCGAAAGAAGAGAGTTCTAATACATACTGCAAAGTGTGTGACATGAAGTTTGACACGCTGAAAGGCTACGAGGAACATTTCGCTGAGTCAGCATTACATGCAACTGAAGTATTAGAGGGTGCTACATGTCTACCTCTTAAAACCAGATGCACCAAGAAACGTGTTCCACGAATATCAACCAACTGTATCTCTTGTGGTAAAACATTCTCTACGTACGCTGCGTTCAGCAAGCACCACCTATCGGCGCACCCCTCGCAGCCGCTCCCGCGGCCGCCCGCCGCGCGCGCCGACGCACAGAGGCAGGTCTGCGAGCTCTGCGGACTCACGCTCGCGAGCGCCTGGTCCCTTGCCAACCACTTGAACACCCACTCGCGCGACAAACGGTACACTTGCAAGACTTGCGGTATGCAGCTCAGCTCCAGAAGTGTACTCCAGAGACATCAGCTGACACACAGCCATGAACGTAACTTCGTATGCGATATGTGTGAGAAGCGGTTCTCCCACCGATCCGGTCTCAGGCTACATTTGAAGACGCACGAGAAAGAACTTAGTCCCACTCGGTAA
Protein Sequence: MPEVKLCRICVRSGVKMYEHDRFQLMSFYKEITGPKIPNKDCLPKLFCFECAALLHKFHEFKKKCLYGQKVFKNLETGCTSLDDTKIKIIPLEPQLKILSESPNIKTYTVKHSKIVKTIKRKYNTFTEVFLDDVKSDIETDYSKVLADKFSRTVKENIAEDIEQVKENIELQDDDFNDFEDSTDTTPFVIAENHVKDESNIEQTLVNGSLNETDTKRTKYTLKTSHDIASHNTQETSHEKTETKYQNGSTVIDDKTNLDNKFQRSVKKKFLDENHWTKITLTDEEASRRFQAKALEHKYLTSDYKCVDCYRTFSQEDMMKRHVKLRHCESLGPHECRHCRMRFKWKSRLQKHLKEHYTIYKCLRCELSFPVEISAFQHDYSHNGVTWTCAHCGQGFRHSSTYYTHLRKHKSKYVCALCGVSFVSEFGLFMHKRVKHVISEDAKEESSNTYCKVCDMKFDTLKGYEEHFAESALHATEVLEGATCLPLKTRCTKKRVPRISTNCISCGKTFSTYAAFSKHHLSAHPSQPLPRPPAARADAQRQVCELCGLTLASAWSLANHLNTHSRDKRYTCKTCGMQLSSRSVLQRHQLTHSHERNFVCDMCEKRFSHRSGLRLHLKTHEKELSPTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00661616;
90% Identity: iTF_00661616;
80% Identity: -