Basic Information

Insect: Epirrhoe tristata
Gene Symbol: PLAGL2
Assembly: GCA_951394285.1
Location: OX596164.1:3839416-3840531[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.018 1.2 10.2 1.1 1 23 86 108 86 108 0.97

2 9 0.0099 0.66 11.0 3.8 2 23 134 155 133 155 0.97

3 9 8.7e-05 0.0059 17.5 0.5 1 23 177 199 177 199 0.98

4 9 1.1e-05 0.00076 20.3 1.9 2 23 204 225 203 225 0.96

5 9 0.0016 0.11 13.5 0.5 1 23 230 253 230 253 0.89

6 9 0.0034 0.23 12.5 0.6 2 23 260 282 260 282 0.97

7 9 5.5e-05 0.0037 18.1 0.6 2 23 290 312 289 312 0.97

8 9 6.4e-05 0.0043 17.9 0.6 2 23 319 340 319 340 0.97

9 9 9.7e-07 6.5e-05 23.6 3.0 1 23 346 368 346 368 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.018	1.2	10.2	1.1	1	23	86	108	86	108	0.97
2	9	0.0099	0.66	11.0	3.8	2	23	134	155	133	155	0.97
3	9	8.7e-05	0.0059	17.5	0.5	1	23	177	199	177	199	0.98
4	9	1.1e-05	0.00076	20.3	1.9	2	23	204	225	203	225	0.96
5	9	0.0016	0.11	13.5	0.5	1	23	230	253	230	253	0.89
6	9	0.0034	0.23	12.5	0.6	2	23	260	282	260	282	0.97
7	9	5.5e-05	0.0037	18.1	0.6	2	23	290	312	289	312	0.97
8	9	6.4e-05	0.0043	17.9	0.6	2	23	319	340	319	340	0.97
9	9	9.7e-07	6.5e-05	23.6	3.0	1	23	346	368	346	368	0.98

Sequence Information

Coding Sequence: atgcccGACAATCATCAACTTGAAACAAAAGTTGAAACTCAAACTATGACGTTCCTTGAAGAACCGATATCGCTTGACAAACTCAATTTTGAAGGAAACTCATCCATAACTTACAATGTTAAAACAGTCGAAAGACCGGTAAACAGACTTCCGAGAAAATGCAGAAATGATAACAAACTACCAAATTGGATGAAGAATGCGGCAACGATCTTTGAATTATCATACGTGTACCCTTTCATCTATAAAAACAACAGatacaaatgttttatttgcttagAAACGTTTATCGatgcaaatattttgaaacatcATACTATAAGTCATGATATCAAGGAAATTAAGCAAAAGCTATGCACCACACCGAATGATGCTATCATTAAAGTAGATGTTACGTATCTACAATGTCGAGTTTGTCATCAAATATTTCACAGTCTTCAAGAATTGAAAGAACATTTGAAAAACCATGATAAGAACTTCAATTCTGACGAGCAAAACAATCTGATACCCTTTAGACTTGCATGTGAACCATTTCAGTGCCAAATGTGCGATGAAGAGTATTCTAAACTGAGACTCCTTATCATCCACATGAGCAAACACTTCAATAACTGCAGCTGCGAGCTTTGTGGGTCCGTCTTCGCCACCAAAACATCGCTTAACCGTCATCTTCAAACACATGAGTCTGGAAACTTCCCCTGCGGAAAATGCGACAAGGTTTTTAGCAACTCTGCGAAAAGAACTTTTCATATTCGAGGAGTCCATCTAAAGCGATTCCCAAGACGATGTCCGATTTGTCTCGAAAGATTTAAGTCTGATTATATGAGAACGAAACATTTACGCGTAGTCCACAATAGGATAGCGGGGTTGAACAAATGCCTGACGTGCGGAAAAGAATATGACTTGAAATACCAGCTGCAATTGCACATGCGTTCAGTACACTTTCAGGAGAAGAATGAAGAGTGTTCTGTGTGCAATGTTCGGTTCTTTTCCAAGTATTTGCTGAGTAGGCACATGCTTATACACACGGGAATCAGGAATTTCAAGTGTGAAGTGTGCGGGAAGTCGTATGTTAGGAAGGCTCATTTGAAACAACACTCCAAGAGTCATTTTCTTGAATAA
Protein Sequence: MPDNHQLETKVETQTMTFLEEPISLDKLNFEGNSSITYNVKTVERPVNRLPRKCRNDNKLPNWMKNAATIFELSYVYPFIYKNNRYKCFICLETFIDANILKHHTISHDIKEIKQKLCTTPNDAIIKVDVTYLQCRVCHQIFHSLQELKEHLKNHDKNFNSDEQNNLIPFRLACEPFQCQMCDEEYSKLRLLIIHMSKHFNNCSCELCGSVFATKTSLNRHLQTHESGNFPCGKCDKVFSNSAKRTFHIRGVHLKRFPRRCPICLERFKSDYMRTKHLRVVHNRIAGLNKCLTCGKEYDLKYQLQLHMRSVHFQEKNEECSVCNVRFFSKYLLSRHMLIHTGIRNFKCEVCGKSYVRKAHLKQHSKSHFLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00267470;
90% Identity: iTF_00661605;
80% Identity: -