Etri013525.1
Basic Information
- Insect
- Epirrhoe tristata
- Gene Symbol
- ZNF212
- Assembly
- GCA_951394285.1
- Location
- OX596151.1:4022588-4033843[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.15 10 7.3 0.5 2 20 7 26 6 28 0.88 2 11 0.16 11 7.2 0.3 1 12 193 204 193 213 0.83 3 11 0.00044 0.03 15.2 0.9 1 23 363 385 363 385 0.98 4 11 4.1e-05 0.0027 18.5 1.0 1 23 401 423 401 423 0.98 5 11 1.1e-05 0.00076 20.3 0.3 2 23 472 493 471 493 0.96 6 11 0.00058 0.039 14.9 1.6 1 23 509 531 509 531 0.98 7 11 1.5e-06 0.0001 23.0 3.6 1 23 537 559 537 559 0.96 8 11 0.0029 0.19 12.7 5.0 3 23 567 587 565 587 0.97 9 11 2.2e-06 0.00015 22.5 0.4 1 23 593 615 593 615 0.98 10 11 0.00051 0.034 15.1 0.7 1 23 619 641 619 641 0.97 11 11 0.00024 0.016 16.1 0.2 1 23 649 672 649 672 0.96
Sequence Information
- Coding Sequence
- ATGGGAGATGCCACATTGAAATGTCCCTTATGCTGCAGTAGGACGTTTACTTCGAGAGAATCATTAGTTGAACATTTAGGAAGCACTATTGCTAACTTGTACTGTCCTATTTGCACCACCAAATGGCCATCTGTACTGCAGCTGATTGAGCATTTGAGCCATGAAAACTGTTTACAAAGTCAGGTATTACAGTTGCAACATAATCAGCTAAGAACTGTAGTGCTTGAGGACTCTCATCATGAAACACTTAATTTGAAGGAATCTAACATACTGGAATTCAAAAACGTTGCCATCAGTACAAGCTTGCCTGTTCGAAACATGGAAGGTACTGAAGATGTCAGTCACATGTATGAGGAACTGATGAAGCCGACCCACCAAACTGACTTGCAATATATGAAGGATGGTGAGAGTCAATATGTGATTCTCACACAAGATCATGATGGAACTGTTGTTACAAAGCAGAACAATGATGGGACTATATCTTTGACCTCTGTAAAAGATATGAAATTAGAGTCTGAGTCTCAGTCCACTCCCGAGCCAGATATGGCAGACACAGAGGAAAGCCAGGAGAACCTATACAGCTGCAACACATGCGGTGTGTCTTTCTCGTCTGTGATTGAGCACATACAGAACTATCACAATGACCAAGATGTTGTTGTTGAGGAACCAATGGACGAGACAGAGGGTGAGCAAATTCCGATAGAATATTTGCCAATCGAACGCGAAGACGCAGCAACGGAGAAGCAAACGTCACGACGCGTTATAACAGATACAGGGAATATCGTAGAGGCGCCACTGAAGGCATTGAAGCAGGAAGatttcTCTATAGTTCAACCCTCAGAAATGGAGCAACAAGACAAGTTAGCGGGTCCAGGATCGAAACGCTATTTGCGTATGAACAATCTATGTGACAGTGTTATCAGAAACCTAAAACAAACTGAAAAGACTGGTCCCACACACAAAGTTCTCGTCAAAGAGGTGCTAACAAAAGATGGCGAGATAATCAAATTTTACCATTGCGTGTTCTGTAATACTAACGTCAGTTCGCTGAGCGACTTCAAAACTCAACCTTGTAAAAgctCGAAATACTCGTGTCTCCAGTGCCCTGTTAAATACGACAACGCGAAATCCTTATGCGCACATATGAAAGTACACAAAGTGAAAACAGCAGAAACCGATTTATCAGTGTCGGCAGAAACGTTTGAATGCGAGATCTGTTTCACCGTGTTCCCCTCTAACAAGTCATTGAAACTGCACAAAAGGATGCATGATCCTATCAAATCCCGTCAAATCGAAGCGCCGAAGAACTCTGATTTCGGTGAAACCTACCTATGCCCGACATGCGATAAGATGATGCCGGTCGACTACAGAGAAATTCACGCGAAGTCTCATCTCAACGAACAGAATCTCCTCAATTGCGGAATTTGTAACAAAAAGTTCAGTTCTGAAGAGTATCTTGAGATGCATATGAATGTACATAATATAGAGAAGGCGCCGCTTACCAAACAAGACCAATCACTGCCATACAACTGCGTTTACTGCGATAGAAGGTTTGCGAGACCGCACGAAAAAGTTAAACATGAAAGAATACATACAGgtGAGAAACCTCACGCGTGTGAGATATGCGGCAAGTCCTTCCGAGTATCTTACTGTCTCACTCTGCACATGCGGACGCACACCGGCGCACGCCCGTACGGCTGCCCGCATTGTGGGAAAAGGTTCAAAGCGCACAGCGTTTACAACCACCATCTGTTGACGCATTCGGAAGTGCGCGCATACAAGTGTCCTTACTGCCCGAAGGCCTTCAAGACGTCCGTCCAGCTAGCCGGCCACAAGAACTCGCACACTAAGCCGTTTGCTTGCACACATTGTAATAGACCATTCGCATCTCTATACGCGGTAAGGGTGCACACCGAAACGCACGGGCGTCAAAACAATCTCAAGTTTTCCTGTTCGCTGTGCGGCGCGAGTTACGCAAGAGCCTTCGCGCTTAAAGATCACATCAAGCAACAGCATAAGGAAGATGTTAAGAGTGAATTGGTGACTGTAGATGAATGGGTGGGCGGTGAACCGGAAAGCTCGGCAGATGTGGAAATTAAATCTCTGCAATCATTGGACAAGGACATAACTGCCGATGCAAATTCCCGCCCACACGATGATCGTTCCGCGTTGGTGAGGATGAACTTCCTGAGGATTTCGGAGTCGACTTTGGCGACTAGGGACTCGCCAAACACGCACTCTCCCAGAATCAGGATTAAATCCGAAGCGAGACTCATCGGAAAACAGAACACGGGCCCACTGATTGTCGGTCCATTGCAAATATGCGTTAGCCCACAGTAA
- Protein Sequence
- MGDATLKCPLCCSRTFTSRESLVEHLGSTIANLYCPICTTKWPSVLQLIEHLSHENCLQSQVLQLQHNQLRTVVLEDSHHETLNLKESNILEFKNVAISTSLPVRNMEGTEDVSHMYEELMKPTHQTDLQYMKDGESQYVILTQDHDGTVVTKQNNDGTISLTSVKDMKLESESQSTPEPDMADTEESQENLYSCNTCGVSFSSVIEHIQNYHNDQDVVVEEPMDETEGEQIPIEYLPIEREDAATEKQTSRRVITDTGNIVEAPLKALKQEDFSIVQPSEMEQQDKLAGPGSKRYLRMNNLCDSVIRNLKQTEKTGPTHKVLVKEVLTKDGEIIKFYHCVFCNTNVSSLSDFKTQPCKSSKYSCLQCPVKYDNAKSLCAHMKVHKVKTAETDLSVSAETFECEICFTVFPSNKSLKLHKRMHDPIKSRQIEAPKNSDFGETYLCPTCDKMMPVDYREIHAKSHLNEQNLLNCGICNKKFSSEEYLEMHMNVHNIEKAPLTKQDQSLPYNCVYCDRRFARPHEKVKHERIHTGEKPHACEICGKSFRVSYCLTLHMRTHTGARPYGCPHCGKRFKAHSVYNHHLLTHSEVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFACTHCNRPFASLYAVRVHTETHGRQNNLKFSCSLCGASYARAFALKDHIKQQHKEDVKSELVTVDEWVGGEPESSADVEIKSLQSLDKDITADANSRPHDDRSALVRMNFLRISESTLATRDSPNTHSPRIRIKSEARLIGKQNTGPLIVGPLQICVSPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00661576;
- 90% Identity
- iTF_00661576;
- 80% Identity
- -