Basic Information

Insect: Epirrhoe tristata
Gene Symbol: -
Assembly: GCA_951394285.1
Location: OX596162.1:6057603-6077808[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.12 8.1 7.6 0.0 1 23 415 437 415 437 0.96

2 11 0.00089 0.059 14.3 3.0 1 23 450 472 450 472 0.96

3 11 8.9e-05 0.0059 17.4 3.6 1 23 478 500 478 500 0.98

4 11 6.2e-06 0.00042 21.1 1.6 1 23 507 529 507 529 0.99

5 11 9.4e-05 0.0063 17.4 0.2 1 23 535 557 535 557 0.93

6 11 7.7e-06 0.00052 20.8 0.1 1 23 563 585 563 585 0.97

7 11 5.6e-06 0.00038 21.2 1.5 1 23 591 614 591 614 0.96

8 11 2.3e-05 0.0015 19.3 3.4 1 23 620 643 620 643 0.94

9 11 0.00017 0.012 16.5 0.8 2 23 650 671 649 671 0.97

10 11 3.2e-05 0.0021 18.8 1.1 1 23 677 699 677 699 0.97

11 11 0.0035 0.24 12.4 0.1 1 23 705 727 705 727 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.12	8.1	7.6	0.0	1	23	415	437	415	437	0.96
2	11	0.00089	0.059	14.3	3.0	1	23	450	472	450	472	0.96
3	11	8.9e-05	0.0059	17.4	3.6	1	23	478	500	478	500	0.98
4	11	6.2e-06	0.00042	21.1	1.6	1	23	507	529	507	529	0.99
5	11	9.4e-05	0.0063	17.4	0.2	1	23	535	557	535	557	0.93
6	11	7.7e-06	0.00052	20.8	0.1	1	23	563	585	563	585	0.97
7	11	5.6e-06	0.00038	21.2	1.5	1	23	591	614	591	614	0.96
8	11	2.3e-05	0.0015	19.3	3.4	1	23	620	643	620	643	0.94
9	11	0.00017	0.012	16.5	0.8	2	23	650	671	649	671	0.97
10	11	3.2e-05	0.0021	18.8	1.1	1	23	677	699	677	699	0.97
11	11	0.0035	0.24	12.4	0.1	1	23	705	727	705	727	0.97

Sequence Information

Coding Sequence: ATGACAGATCCTTGTCTGGTTTGCAACACTCGGGGTCCTTTAGTTGACGAATACATCCAGAATGTCTTCGATGAAAATAATAAATCATTCTCCCATGAACGGAAGCTTCTGGATACATTGTGTGAAATCATCAACACACAACTGGATGAAGAGAATGTACATACTAAGAGACTCTGCACCGATTGTTATAAGATATGTGTGAACTATGACATGTACAAAACTAAcGTGTCCGTCTTAAAATCAAAGCTATGCCAACTATACAAAGCTACACAAGAGAAGATTTCCGATATTAAACCAGTGAACATATCTCCTGTTAAACAAACCAAAGgaATGTTTGTAGTACCAGCATCTAAACTACAACCCCTTCCTGCTGACTATCAACTGAATTTGGGCAAAATCGCTGCGATGGCCAATCCTAAGGTCTCAAAACCGCTGCTAAACCTAAAAATGACGATAGGCAACTCAGTGCTCACACAAAGCCTAGCAACATCCACCGTCAAGATAATAAAGCCCAGTGAAGTATCTAACAACATAGATATCGGTGAATGGAGTGTTAGCACATTGCCTAGAGAGTTATTTTCGGGGAATGAGAGTGAAAATGATGTTGATAATATGGAGATTGATGAAgAATGCAATGTGGATTCGGTCTCTCAAAGTGAACCTGCTTCAGTTGACTCTTCGATAAAGATTGAAAATGGCGACGGCGCTAGTTATATTGACTCTAAAAACTTTGAACTGTTATTAGACGAAACGGAGGAAGACGATCAACCACACACAATAGTATTGGACAGCAACAACTCAATACTACAGATGATGTCGGGCCAGAAGCTGGTCTACGAGAACGGACAACTGTCGCTTGTGATGGACAAcgaagatgatgaagatgcTGATGAAGTTGATTGTCAAGATTCTAACGATGAGGAGTCACAAATAGAGCTGCAGGTTTCTGGAGATGAAGAAACAGCCAACGCTATCATAGCGGCTGCACAGGAACaagGTGGTGCGTTCATAAAAGTGGAGAGTGGTGAGATGTACCGAGTGAAGTCGGTGCAGAGCACGCCGTCCGACGTCGGCGTCGGCGTCGGTGTCGTGCCGGACACGGCCGCGCAGCTCGTGGTTAAGGACGGGGACCAGTTCCGATGTCTCGTCTGTGATAACAGATTAgGTCCAATAAAGATGACATACACGGCCGATGCCTACAATATGGTGAAACACATGAAGAACCAGCACTCCGCTAAAGTGTATATCTGCGCCCTCTGTGGAATTATTATGAGAAATAGATCTGAATATGCTACACATATAGcGGAACATACAAAAAAGATTCCCCAAACATCGAAATCTCGTTCGTACACGTGCAACGTTTGCAACAAAAGCTACAACTCGCGCACATTACTGCACGAGCACTCCAACCTGCACACGGGCGCGCGCCCGCACGTCTGCCACTTGTGCGGGAAGGGATTCGCCTCTAAATATACCAGGCAGGCGCATCTTAAGACTCACCAGATCCGACCGCGCCCCTTCAAATGTCCTACGTGCGGCAAATCATTCCTTTCGCAACAGAATCTGACGCAGCATGAGAAGACGCATCTTGGGATTAAGAGCTTCGTTTGTAATGTTTGCAACAAAGCATTCGGTACACAGCACAGTTTAGAAGTACACGGCGTGGTACACAGCGGTAAAAAAGCGCATGTTTGCAACGTCTGCGATAAAGCATTCGCGAGACGAGCAGAGCTTGCAGATCATGCTAGGATACACACTGGCGAGCGTCCATTCGAATGTGAAGTGTGCGGCGCTAAGTTCTCCCAGAGGTCGAACCTGCACTCGCACCGGCGCGCGACACACCTCGACGACAAGCGGCACGCCTGCCCCGACTGTCACAAGCGGTTCAAGCGGAGACGATTGCTGCAGTACCATATAAAGGCGGCGCACACGGGCGAGCGACCGCTACAGTGCGAGGTGTGTCGCGCGACTTTCGTGTACCCCGAGCATTACAAGAAGCATGTCAGGATACACAATGGTGAAAGGCCTTACTACTGTGAGATTTGTGGCAAAGCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACAAGAAGCCGTACGAGTGTCTCGCGTGCGGCGCCTCCTACATGCGCAAGCGCATGCTCGTCGCGCACATGAACGCGCACGGTCATTTGGCGGAATCAATAGTAGTGAACCAACCGAGAGTAACGAAAGTTAATGAAAACttggtTACAGAGAAGTTAGATACACAAAATtatgaagaagaaaaagatgaagatgTTATAACAGAAGATGGAGACGAAGATAATGGGAAATTATTCACTTTAAATGGAgAATCAACATTATCGGAGCATTCAGAGGTACCTGTTATTGGAGCCATCAACGCTGACAACTTGGAACCACCACAGTTAACAAATGAAAATGGAAGCATCCTACGCTTCATACAAGTGAAGATGCCAGATGGACAGGATGGTTGGGTGGCACTTAACGACTGA
Protein Sequence: MTDPCLVCNTRGPLVDEYIQNVFDENNKSFSHERKLLDTLCEIINTQLDEENVHTKRLCTDCYKICVNYDMYKTNVSVLKSKLCQLYKATQEKISDIKPVNISPVKQTKGMFVVPASKLQPLPADYQLNLGKIAAMANPKVSKPLLNLKMTIGNSVLTQSLATSTVKIIKPSEVSNNIDIGEWSVSTLPRELFSGNESENDVDNMEIDEECNVDSVSQSEPASVDSSIKIENGDGASYIDSKNFELLLDETEEDDQPHTIVLDSNNSILQMMSGQKLVYENGQLSLVMDNEDDEDADEVDCQDSNDEESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMYRVKSVQSTPSDVGVGVGVVPDTAAQLVVKDGDQFRCLVCDNRLGPIKMTYTADAYNMVKHMKNQHSAKVYICALCGIIMRNRSEYATHIAEHTKKIPQTSKSRSYTCNVCNKSYNSRTLLHEHSNLHTGARPHVCHLCGKGFASKYTRQAHLKTHQIRPRPFKCPTCGKSFLSQQNLTQHEKTHLGIKSFVCNVCNKAFGTQHSLEVHGVVHSGKKAHVCNVCDKAFARRAELADHARIHTGERPFECEVCGAKFSQRSNLHSHRRATHLDDKRHACPDCHKRFKRRRLLQYHIKAAHTGERPLQCEVCRATFVYPEHYKKHVRIHNGERPYYCEICGKAFNSRDNRNTHRFVHSDKKPYECLACGASYMRKRMLVAHMNAHGHLAESIVVNQPRVTKVNENLVTEKLDTQNYEEEKDEDVITEDGDEDNGKLFTLNGESTLSEHSEVPVIGAINADNLEPPQLTNENGSILRFIQVKMPDGQDGWVALND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00661556;
90% Identity: iTF_00661556;
80% Identity: -