Basic Information

Insect: Epirrhoe tristata
Gene Symbol: -
Assembly: GCA_951394285.1
Location: OX596145.1:4421510-4427270[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.93 63 4.8 9.3 1 23 167 189 167 190 0.95

2 12 0.042 2.8 9.0 0.1 1 23 198 220 198 220 0.93

3 12 1.5e-06 0.0001 23.0 2.2 2 23 226 247 225 247 0.97

4 12 1.8e-05 0.0012 19.6 0.4 1 23 253 275 253 275 0.98

5 12 3.6e-06 0.00024 21.8 1.5 1 23 284 306 284 306 0.95

6 12 1.7e-05 0.0012 19.7 0.1 1 23 312 334 312 334 0.98

7 12 0.0004 0.027 15.4 7.9 1 23 340 362 340 362 0.98

8 12 6.4e-09 4.3e-07 30.5 0.8 1 23 368 390 368 390 0.99

9 12 0.00035 0.024 15.6 1.2 1 23 396 418 396 418 0.98

10 12 1.7e-05 0.0011 19.7 1.4 1 23 424 445 424 445 0.97

11 12 0.0035 0.24 12.4 0.9 1 23 451 473 451 473 0.92

12 12 0.004 0.27 12.2 0.2 1 21 479 499 479 500 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.93	63	4.8	9.3	1	23	167	189	167	190	0.95
2	12	0.042	2.8	9.0	0.1	1	23	198	220	198	220	0.93
3	12	1.5e-06	0.0001	23.0	2.2	2	23	226	247	225	247	0.97
4	12	1.8e-05	0.0012	19.6	0.4	1	23	253	275	253	275	0.98
5	12	3.6e-06	0.00024	21.8	1.5	1	23	284	306	284	306	0.95
6	12	1.7e-05	0.0012	19.7	0.1	1	23	312	334	312	334	0.98
7	12	0.0004	0.027	15.4	7.9	1	23	340	362	340	362	0.98
8	12	6.4e-09	4.3e-07	30.5	0.8	1	23	368	390	368	390	0.99
9	12	0.00035	0.024	15.6	1.2	1	23	396	418	396	418	0.98
10	12	1.7e-05	0.0011	19.7	1.4	1	23	424	445	424	445	0.97
11	12	0.0035	0.24	12.4	0.9	1	23	451	473	451	473	0.92
12	12	0.004	0.27	12.2	0.2	1	21	479	499	479	500	0.95

Sequence Information

Coding Sequence: ATGGAAACCAAAGAACAAATAAACCTTGAAGACGAAAAGGATGATCGTATAGAATTTGAAATACCTCTCACATTGCTCCAATATTTAGGCACAGAAGAATGTAATCTACAAAATATCTGTCGAATCTGTCTGTCTACTAGCAATGATCTGATGCACCCACTATCTTCTAACAAAGAGTACAGTGCTTTGACTGAGATGTTTGAAGCTATAACTTGTATTCAAGTGAATTCAGAAGATGATTTTCCGAATAGATTATGTTCCAATTGCCAAACAGAAGTTCTTCACTACTTTAAGTTTAAGAGTAAATGTGAAAAATCTGATTACACACTGAAATCTATACTAAAAGGCAAATTTGCTATCAAAGATGAGCCCAAATCTGATTATGTTGTTATTAATATTGAAGAGGAGTATGTTAAAAGAGAACAggatacagatcatttagATTCTGGTTCTCAAATCACAGAGATGATAGTTTCTAACAAGCAGAAAAAATCACAATATTCTTGCTCTTTTTGTTCAaagGTGTTCCATCAATTGAAACTCTTAAAATGTCATCTGAACAAACACCATGGAGCCACAGATGATCCATCATTCTCGTGTATTAATtgcaatgaaatatttatatctGAAAATGACCTTAAATTGCATTACATTGTTCATGAAAAGGGCCCATGGAAGTGCAGTAATTGTAATAAGAACTTTAaagACAAAACAGCGCTGCGCAGACATATTCAACGACACATGGATTCTAAACGGTTTTCCTGCGACGCTTGTGGGAAGATGTTTGTTGAGAAATACGCTTTGAAGCGTCACTCACGCGTCCACACTGGGGAACAAGTGGAGAAGAAACACGCTTGTTCTGACTGTGGCAAAAGATTCATAGACAATGCCCAGCTTATGGCACACATGACGCATCACAGCGGCGACAAGCCGTTCCAATGCGTAGTCTGCGGCAAGGCATTCCCTTCGCCGCGGCTACTATCGTCCCACCGCCTAGTGCACTCGGAACTCAAGCCCTATGCCTGTAAATACTGCGACAAGAGGTTCCGTCACGAGTCAACGCGAAATACTCATCACAGGACACACACGGGGGAGAAGCCGTATGTGTGTTCCATTTGCGGCAAAACTTTTATACAGAGCTCTAATATGAGGCTGCATATGCGGACTCATACAGGTGAGAAACCTTACGCATGTTCGCGCTGTGACAGCAAGTTCTCATCCGGCTCGTCGCTGAAGAGTCATGAGCGGACGCATACTGGAGAACGTCCGTATAAGTGCAAAATCTGTGGCAAAAGTTTCGCCCGCCTAAATCTAAAGATGCACATGCGCCTACATTCTGGCGAGAGACCGTTCGCGTGCAGCGCTTGTCCTAAGAAGTTTGTCAGCGCATCTCTTTTAAGGGACCACTGTCGCGCTCACACTGGTGAGAAACCATTTGAATGCGCCAAATGCGAGTCGAAGTTCGCTTCAAAAGCCCTACTCATAAAGCATTTGAAAAACGTCGAAAACAATAAATCAAAAAGAAGACACTCCAAGGATAATGGGACCTCGACAGTTCCTATCAAGCCTGTGGATGCACAAAGCGAAGTACCGATGGAAATAGAGAGCGAGATACCTAACGCGATCATGGAATTAACCCTAGGTACTCATGAATCATTTGATGCCAGCCAAGAATTAGTCTTCcaagaaaataatgtaaaaacgcACGTTATTGTGCTAGGAAATAGCAATTCAGTAAGGATTGTTAGTAATGATGTTGAAGGCTCAAATAGTCTGAATATTACTGTTAATGAAATTGGAATTAGCATGTCCGAAATGAATTCTAATAGTTGA
Protein Sequence: METKEQINLEDEKDDRIEFEIPLTLLQYLGTEECNLQNICRICLSTSNDLMHPLSSNKEYSALTEMFEAITCIQVNSEDDFPNRLCSNCQTEVLHYFKFKSKCEKSDYTLKSILKGKFAIKDEPKSDYVVINIEEEYVKREQDTDHLDSGSQITEMIVSNKQKKSQYSCSFCSKVFHQLKLLKCHLNKHHGATDDPSFSCINCNEIFISENDLKLHYIVHEKGPWKCSNCNKNFKDKTALRRHIQRHMDSKRFSCDACGKMFVEKYALKRHSRVHTGEQVEKKHACSDCGKRFIDNAQLMAHMTHHSGDKPFQCVVCGKAFPSPRLLSSHRLVHSELKPYACKYCDKRFRHESTRNTHHRTHTGEKPYVCSICGKTFIQSSNMRLHMRTHTGEKPYACSRCDSKFSSGSSLKSHERTHTGERPYKCKICGKSFARLNLKMHMRLHSGERPFACSACPKKFVSASLLRDHCRAHTGEKPFECAKCESKFASKALLIKHLKNVENNKSKRRHSKDNGTSTVPIKPVDAQSEVPMEIESEIPNAIMELTLGTHESFDASQELVFQENNVKTHVIVLGNSNSVRIVSNDVEGSNSLNITVNEIGISMSEMNSNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -