Basic Information

Insect: Epirrhoe tristata
Gene Symbol: -
Assembly: GCA_951394285.1
Location: OX596150.1:8599835-8605625[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.2e-07 5.5e-05 23.9 0.8 1 23 158 180 158 180 0.95

2 11 0.00042 0.028 15.3 0.1 2 23 192 213 191 213 0.98

3 11 1.3e-05 0.00085 20.1 4.9 2 23 221 242 220 242 0.95

4 11 0.0066 0.44 11.5 4.0 1 23 248 270 248 270 0.99

5 11 2.6e-06 0.00018 22.2 1.3 1 23 276 298 276 298 0.97

6 11 5.5e-06 0.00037 21.2 1.0 1 23 304 326 304 326 0.96

7 11 3e-05 0.002 18.9 0.2 1 23 332 354 332 354 0.97

8 11 0.001 0.069 14.1 4.6 1 23 360 382 360 382 0.98

9 11 9.5e-07 6.4e-05 23.6 1.0 1 23 388 410 388 410 0.99

10 11 1.8e-05 0.0012 19.6 1.0 1 23 416 438 416 438 0.98

11 11 1.1e-05 0.00071 20.4 1.9 1 23 444 466 444 466 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.2e-07	5.5e-05	23.9	0.8	1	23	158	180	158	180	0.95
2	11	0.00042	0.028	15.3	0.1	2	23	192	213	191	213	0.98
3	11	1.3e-05	0.00085	20.1	4.9	2	23	221	242	220	242	0.95
4	11	0.0066	0.44	11.5	4.0	1	23	248	270	248	270	0.99
5	11	2.6e-06	0.00018	22.2	1.3	1	23	276	298	276	298	0.97
6	11	5.5e-06	0.00037	21.2	1.0	1	23	304	326	304	326	0.96
7	11	3e-05	0.002	18.9	0.2	1	23	332	354	332	354	0.97
8	11	0.001	0.069	14.1	4.6	1	23	360	382	360	382	0.98
9	11	9.5e-07	6.4e-05	23.6	1.0	1	23	388	410	388	410	0.99
10	11	1.8e-05	0.0012	19.6	1.0	1	23	416	438	416	438	0.98
11	11	1.1e-05	0.00071	20.4	1.9	1	23	444	466	444	466	0.97

Sequence Information

Coding Sequence: ATGACGAGTCTATTGCTCCGAAAAGATCTCAAATACTGTTGCAGAACATGCTTGAATGATTTGTCAACCAAAATGTATGATTTATTCGAAGAGAAGAAAGACTCCCCCAGTGTGTCTGAAATTCTAtctttgtttacaaatatACTGGTGCAGACTGAAGACATGCTTCCAAAAAACTTATGCAGCAGCTGCTATAACTGTCTCTTAAACTTTTACGATTTCAAGAAACTAGCTGAGAAAGTGGACTTACAATTACATCATTACTATGACAATTTCATACCAGCAGACAAGTCTTCTGATGTTGAATTTGAGCTGCCGTTAAAGAATGAAGTTGGTGATTCCGATGAGTTTGAGATTGAATTTGATCTTGCCActataaaaacagaaaatagTGATAGCTGTGTCTCTGAACATTCCTATCCCATTGAATACAAGTTAGAAACGAAAAAaactgtgaaaaaaaaacagtattttAAGTGTCCTGAATGCCAGAAAAAATTTATAACACAAGATAAACTTCAAAGGCATCTGGTCGCACATAAAACTCATCTGTCAAATGAATCAGAACCTGTCAAATGTGACATTTGCTCAGCTTCCTTCCCATCAGTAAACTCTCTCGCTGCTCACACCCGTAAACATGTACCTAAAGGCAGGGTACTATCCTGCCAGCATTGCGgcaaagttttcaaaaaaaccaGCCACTTAAAGAGGCACGAGGCATCTCATGATGTTAATCGCAAGTACAAATGTACTTTATGCACTAAGGGGTACCATTTAGAAAGTCAGTTAGCCGAGCATATGCATAAACATAGTGGTGTTAAACCTCATCCGTGCCCGATATGCCCGAAAGCGTTTGCACATTTATCTACTTTTAATAATCACTTAAGACTACACACAAGAGGGAAACCCTATCTCTGTCCGACGTGTGGCAAAGGTTTTAATTCTAGTACTAATATGAAGCAGCACGTTAAAAGACATCTTGGTCTGAAGGACTTTGCTTGTAATTTATGTCCTTGGAAGTTTGTAAGTGCTGGCGCTTTAAAATCACACAAGAAGACGCACACAGGCGAAAAGCCGTACAAGTGCAAGCATTGCCCGGCCACTTTCACAGCGACACACTCTCTTAAGATACACACGCTTAAGCACCTCGGACATAAGCCGTTTCAATGTGAAGTATGTCCTatgaaATTCACGACAAAGGATTATCTAGCCAGTCACACCCGCACACACACGGGAGAAAAGCCGTTTCGTTGCGATTTGTGTGAACGTACCTTCAGCCAGACAGGAGATCTACTCAAACACAAACGTGCACATTTAGGGATCAATATGTACAAATGTGACCAGTGTACACAGAGTTTTCGACTGAAGTCTCAACTACGAAATCACATCTCTGAACACTACGTATCTGCTTTGAAGACCACAGATAATAAAGCAGATgccaaaatacaaaatggcgACGGTGCTAGTTGA
Protein Sequence: MTSLLLRKDLKYCCRTCLNDLSTKMYDLFEEKKDSPSVSEILSLFTNILVQTEDMLPKNLCSSCYNCLLNFYDFKKLAEKVDLQLHHYYDNFIPADKSSDVEFELPLKNEVGDSDEFEIEFDLATIKTENSDSCVSEHSYPIEYKLETKKTVKKKQYFKCPECQKKFITQDKLQRHLVAHKTHLSNESEPVKCDICSASFPSVNSLAAHTRKHVPKGRVLSCQHCGKVFKKTSHLKRHEASHDVNRKYKCTLCTKGYHLESQLAEHMHKHSGVKPHPCPICPKAFAHLSTFNNHLRLHTRGKPYLCPTCGKGFNSSTNMKQHVKRHLGLKDFACNLCPWKFVSAGALKSHKKTHTGEKPYKCKHCPATFTATHSLKIHTLKHLGHKPFQCEVCPMKFTTKDYLASHTRTHTGEKPFRCDLCERTFSQTGDLLKHKRAHLGINMYKCDQCTQSFRLKSQLRNHISEHYVSALKTTDNKADAKIQNGDGAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00661543;
90% Identity: iTF_00661543;
80% Identity: -