Etri022033.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epirrhoe tristata
Gene Symbol
-
Assembly
GCA_951394285.1
Location
OX596164.1:3832911-3838806[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.00018 0.012 16.5 0.3 1 23 6 28 6 28 0.99
2 25 0.0017 0.12 13.4 2.0 2 23 33 54 32 54 0.95
3 25 0.0034 0.23 12.5 0.2 2 23 60 82 59 82 0.90
4 25 0.18 12 7.0 1.3 3 23 90 111 89 111 0.96
5 25 0.033 2.2 9.3 1.1 1 23 118 140 118 140 0.95
6 25 0.062 4.1 8.5 0.8 1 23 207 229 207 229 0.92
7 25 0.06 4 8.5 1.7 1 19 320 338 320 342 0.92
8 25 0.18 12 7.0 0.1 2 23 371 393 370 393 0.93
9 25 0.00043 0.029 15.3 1.3 1 23 414 436 414 436 0.99
10 25 0.029 2 9.5 0.0 1 22 440 461 440 462 0.90
11 25 0.21 14 6.8 0.1 2 23 468 490 467 490 0.90
12 25 0.0013 0.086 13.8 2.6 1 23 496 519 496 519 0.97
13 25 6e-05 0.004 18.0 0.2 1 23 526 549 526 549 0.97
14 25 1.7e-05 0.0012 19.7 0.8 1 23 555 577 555 577 0.98
15 25 4.1e-07 2.8e-05 24.8 1.2 1 23 583 605 583 605 0.99
16 25 8.3e-05 0.0056 17.5 6.7 1 23 611 633 611 634 0.95
17 25 0.31 21 6.3 0.9 1 23 756 778 756 778 0.96
18 25 0.034 2.3 9.3 0.3 2 23 803 825 802 825 0.94
19 25 0.41 28 5.9 0.1 1 23 850 872 850 872 0.91
20 25 0.00085 0.057 14.4 0.2 1 23 876 898 876 898 0.98
21 25 0.0079 0.53 11.3 0.3 1 23 903 926 903 926 0.92
22 25 0.0097 0.65 11.0 0.4 2 23 933 955 933 955 0.93
23 25 0.0062 0.42 11.6 6.2 1 23 962 985 962 985 0.97
24 25 0.00025 0.017 16.0 2.4 2 23 992 1013 991 1013 0.96
25 25 4.3e-05 0.0029 18.4 0.6 1 23 1019 1041 1019 1041 0.99

Sequence Information

Coding Sequence
ATGTCGTTGGGTCAATACAGATGCTTAGTTTGTGGTATTAACTATGATGAATACATGAACCTGAAGCGTCATATGAATGTACATTACGCTACCTGTGTTTGTGAACAATGTGGTGCTAGATTCATTACAGCAGATACCCTGAGGCTTCATACTCATTCACATGTAAAGGAATCAGTTCCGTGCGAGGTTTGTGGCAAAGTGTTTCGCTCAGAGGTTTACAAGAAGAAACACTTTGACTCTGTACACATGAAGAAAAAGACGCATGGATGTCTACAATGCTCTGAAACTTTCGTAAATCACTATCAGAAACTGAAGCATATATCGTCGGTCCACGGAATAAAATTGAAGCAATATAAGTGTCACTTGTGCCCGAAAGTGTATGAGTTGAGTTGGAAGCAAGACCACATTCGCATTACGCATTTAAAAGAAAAGCGTCACACATGTATCGATGAGCGTCCGATTGAGAACAAGGATAGAAGAAATAAACGTTGCATTGCGAGAATCACACCACAGGCTCCAATCAAACCTTACAGCATTGAAATCAAAGCCAGACAGCGAAGTGTCCTGACTCTTCTAGAGTGTTCTAGAATATGCCCCTTCAAATGGAGAAAGAACAGATATTTTTGCATTTACTGCACTGAAGGTTACGCCGATCCTGCTCAATTGAGGAAGCATCATTCTCAGCATGAAGACATAAAACCTCTCCAGATTAAAACAGCTATtagcaaaaacaaaaagaaagaaataataaaagctGATATTACTGATGCCAGCTgtGTTGATGAGCCTCCGGACGAGACTCGAGAAGAAATGATCACACACACTGATACAAAATCAAAGACACAGCAGATTCAAACGCGTAACAACTCAGAAATCAAAGCCAGACGAATCAAACAGTGCGTACTGATACTCCTAGAGTGCTCCAGGATATGTCCATTTAAATGGATGAGGAATCTATTTTTCTGCTTGTACTGTGATCAAAGTTACGCCGATCCTGCTAAGCTAAGGGAGCATTGCACTGAGCATGAGGATATTAAACTTCAGAAGATCAAACACgctttaactaaactaaagaaacaTGAATTCCAAAAAGCGGACATAACAGACGTTAGTTGCAAGCTCTGCGATACACCTATAGATAATTTAGACACGCTAGTGAAACATTTATCTGaagatcataaaaaaaacatcgacCCAAAATCTGTAGGAATATTGCCATTCATAATTAACTTAAACGATTATAAGTGCGCTTTATGCGATGAGAAATACGCTGAATACAAGTCTCTTAATCATCACATGAACGTTCATTATCAGAATTTTATTTGCGCGATATGTGGGGCTGGTTTTATCACCCCAGAAAGGTTGAGGGTTCATTCTTTTGCGCATGAATCTGGATCGATCCAATGTGGCGCTTGTGAAAAGGTTTTTCGCAGTAACAACGCAAAAAACGAGCACTATGCTAACGTACATATGCAGGTTAAAAGACACAGGTGCCCGCAATGCCCTGAAACATTCCGCAACTACTTTCAAAGGTCAAAGCATATATCTACGGTCCATGGAATGAAGTTAAAAGAGTTTAAATGCGATCTCTGTCCGAAGGTCTTCACTGTTAGTGGGAAATTGGGCGTTCACATACGCAATACTCATTTAAAGGAGAAACGATATCCTTGCAATGTTTGTGAATGGAAATTCTATTCCAAATCAGAACTAAAGTATCATATGGTGAAACACACTGGAGAGAGGAAGTACCAATGTAATGTTTGTAAGAAAGCTTATGCGAGGAAGTATACGCTGAGAGAGCATATGAGGATACACGAAAATGACAGACGATTTGTGTGCACGATATGCGGGAAAACTTTCGTGCAAAGCTGCAGTTTGAAACACCATTCCAAGATTCATCATCCGTATCCAAAAAgAAACAAGCAAATAGCTGACGCGACGAAGGAAACGAAGATTGTCCCACTGTTCCAAGTGGATTACGATCGCAGCCTATGCAAACCCTTGGGGACAGTCACAGACTTCACAAAGCTGAAGAGGAAAACTTACAATATATCCGAGACTCTTACATACGAGAGTTCTCGAAGTCCATCGCCCTTGAAACATGAGAGATCGCCGTCGCCCTACGAACCCGAAGACAAAAACACCAATCCCCCtgaaaaatacttactgaAAGAACCCGCAAAGAAGATCCCTGATTGCCGACAGAATGCTTTGATTGTTTTTGAATACTCCACCGCGTATCCGTTTGTATTCTCCAACAACAGCTTCAGATGCTTCGTTTGCTCTCAATCGTATCTAGACGTTCCTCATCTCAAGATGCACATGGCTGAACATCCCTTTGCGCATATCAAACGTTTAGTGAACAACAGAAAGGAAAATGTTCTAAAAGTCGACGTAAGCGATCTAACTTGCAAACTATGCTCGTTACCTCTTAGAGATTTGGTCACACTGAAACGACACCTCAAAGATGTTCATGATAAACCTGTAGATACCGAGCTGCAAGATAACCTGATACCGTACGACtttacaatacaaacaaatgaAGGATACCAATGCGTTGTTTGCGAACAGAGCTTCATTAAAGTCCGCATTTTAGTTATCCACATGAGCGATCACTTTATTAACTACAGCTGCGAGGTGTGCGGTTCTGGATTTATGACCTTGCGTTTGCTGAAGAAGCATCTAGAAGTTCATGAGACTGGAAACTTTCCCTGCGATCGTTGCGATAAGGTTTTCAGTACGACACAAAAGCGGGCTTTGCATGTTCGTGGAGTTCATTTGAAACAGTATCCGAGACGATGCCCGATGTGCCCCGAGCGTTTCAATTCGAATTACAAACGCACTATTCATCTTCAAGATGTTCATAACCAAACGACGCGCGTGCATAAGTGTAAAACGTGTGGCAGGGGTTtccatttaaaatatcatctGATAAGTCACGTAAAGTCGGTTCATCTTCAAGAAAGGAACCAGCAGTGTGACGTGTGCCTCCAAAGGTTTTGTAACAAAGAGTCATTGAAGAGGCATATGGTGATACATACAGGGGAGAAGAACTATAAGTGTGAGGTGTGCGGCATGGCTTTTTTGAGGAGAAAGAACTTGAAAGATCATCTGCGCTTACACGATATCCATTAA
Protein Sequence
MSLGQYRCLVCGINYDEYMNLKRHMNVHYATCVCEQCGARFITADTLRLHTHSHVKESVPCEVCGKVFRSEVYKKKHFDSVHMKKKTHGCLQCSETFVNHYQKLKHISSVHGIKLKQYKCHLCPKVYELSWKQDHIRITHLKEKRHTCIDERPIENKDRRNKRCIARITPQAPIKPYSIEIKARQRSVLTLLECSRICPFKWRKNRYFCIYCTEGYADPAQLRKHHSQHEDIKPLQIKTAISKNKKKEIIKADITDASCVDEPPDETREEMITHTDTKSKTQQIQTRNNSEIKARRIKQCVLILLECSRICPFKWMRNLFFCLYCDQSYADPAKLREHCTEHEDIKLQKIKHALTKLKKHEFQKADITDVSCKLCDTPIDNLDTLVKHLSEDHKKNIDPKSVGILPFIINLNDYKCALCDEKYAEYKSLNHHMNVHYQNFICAICGAGFITPERLRVHSFAHESGSIQCGACEKVFRSNNAKNEHYANVHMQVKRHRCPQCPETFRNYFQRSKHISTVHGMKLKEFKCDLCPKVFTVSGKLGVHIRNTHLKEKRYPCNVCEWKFYSKSELKYHMVKHTGERKYQCNVCKKAYARKYTLREHMRIHENDRRFVCTICGKTFVQSCSLKHHSKIHHPYPKRNKQIADATKETKIVPLFQVDYDRSLCKPLGTVTDFTKLKRKTYNISETLTYESSRSPSPLKHERSPSPYEPEDKNTNPPEKYLLKEPAKKIPDCRQNALIVFEYSTAYPFVFSNNSFRCFVCSQSYLDVPHLKMHMAEHPFAHIKRLVNNRKENVLKVDVSDLTCKLCSLPLRDLVTLKRHLKDVHDKPVDTELQDNLIPYDFTIQTNEGYQCVVCEQSFIKVRILVIHMSDHFINYSCEVCGSGFMTLRLLKKHLEVHETGNFPCDRCDKVFSTTQKRALHVRGVHLKQYPRRCPMCPERFNSNYKRTIHLQDVHNQTTRVHKCKTCGRGFHLKYHLISHVKSVHLQERNQQCDVCLQRFCNKESLKRHMVIHTGEKNYKCEVCGMAFLRRKNLKDHLRLHDIH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-