Etri022055.1
Basic Information
- Insect
- Epirrhoe tristata
- Gene Symbol
- -
- Assembly
- GCA_951394285.1
- Location
- OX596164.1:3979883-3994002[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 37 0.0043 0.29 12.1 1.7 1 23 4 27 4 27 0.93 2 37 0.011 0.73 10.9 1.3 1 23 171 194 171 194 0.91 3 37 0.015 1 10.4 0.1 2 23 221 243 220 243 0.95 4 37 0.0028 0.19 12.7 3.4 1 22 265 286 265 286 0.96 5 37 0.064 4.3 8.4 0.1 1 23 291 313 291 313 0.95 6 37 0.054 3.6 8.7 3.5 1 23 348 371 348 371 0.93 7 37 0.00098 0.066 14.2 3.8 2 23 379 401 378 401 0.95 8 37 0.068 4.6 8.4 0.2 2 23 407 428 406 428 0.95 9 37 5.7e-05 0.0038 18.1 1.1 1 21 434 454 434 455 0.95 10 37 0.011 0.73 10.9 1.3 1 23 584 607 584 607 0.91 11 37 0.015 1 10.4 0.1 2 23 634 656 633 656 0.95 12 37 0.0058 0.39 11.7 3.4 1 21 678 698 678 699 0.95 13 37 0.012 0.83 10.7 0.0 1 23 704 726 704 726 0.95 14 37 1.2 82 4.4 1.6 1 23 731 754 731 754 0.83 15 37 0.11 7.1 7.8 2.9 1 23 761 784 761 784 0.88 16 37 0.00053 0.036 15.0 2.0 2 23 792 814 791 814 0.92 17 37 0.69 46 5.2 0.2 2 23 820 841 819 841 0.91 18 37 0.034 2.3 9.3 1.2 1 23 972 995 972 995 0.91 19 37 0.49 33 5.7 0.3 2 23 1022 1044 1021 1044 0.94 20 37 0.0026 0.18 12.8 2.8 1 22 1066 1087 1066 1087 0.97 21 37 0.00013 0.0087 16.9 0.1 3 23 1094 1114 1092 1114 0.97 22 37 0.016 1.1 10.4 1.4 1 23 1119 1142 1119 1142 0.96 23 37 3.6 2.4e+02 2.9 2.7 1 22 1149 1170 1149 1172 0.85 24 37 0.038 2.5 9.2 3.2 2 23 1180 1202 1179 1202 0.92 25 37 0.34 23 6.2 0.5 2 23 1208 1229 1207 1229 0.94 26 37 0.00034 0.023 15.6 0.2 1 21 1235 1255 1235 1256 0.95 27 37 0.0046 0.31 12.0 0.8 1 23 1386 1409 1386 1409 0.93 28 37 0.021 1.4 10.0 0.1 1 23 1548 1571 1548 1571 0.93 29 37 0.036 2.4 9.2 0.1 2 23 1598 1620 1597 1620 0.96 30 37 0.001 0.07 14.1 0.2 2 23 1643 1664 1642 1664 0.97 31 37 3e-05 0.002 18.9 0.0 1 23 1668 1690 1668 1690 0.99 32 37 0.0054 0.36 11.8 1.7 1 23 1695 1718 1695 1718 0.96 33 37 2.9 1.9e+02 3.3 0.3 2 22 1725 1745 1724 1747 0.78 34 37 0.00062 0.041 14.8 1.8 2 23 1755 1777 1755 1777 0.97 35 37 0.0002 0.013 16.4 0.7 1 23 1783 1805 1783 1805 0.97 36 37 1e-06 6.8e-05 23.6 1.9 1 23 1811 1833 1811 1833 0.99 37 37 0.0011 0.07 14.1 4.6 1 23 1839 1862 1839 1862 0.97
Sequence Information
- Coding Sequence
- ATGGCAAAGTACAAGTGCTTTTATTGCGGAGAACAGTTCAAGAACCGGATAGGTAAACGGAAACACATGGTAGAAACTCACGGCGCGAAGTACCCAGACTTGAAGTGTGCCTGTGATACGAgTGTCGTGGGCGATATcatcattgaaataaaaccagAGGTTTCTGTCAAAGTTGAAGATATGACCTACGAATACAATGTACCCGAAGAGCTTGATACACACGACATTGATATCAAAACCGGACTTGTATCTcaagaaaacaaaattgtgCTGAGTGGTGAATCAGCAGTTGCATCAGCTAAACCAGACTCATCGAAATTGCAAGTCAAAGTTAGACCTGAAACACAGCAAGCGCGAACACTTCCACCAAAACCTAACAAAAAGAAACCGTTAAAGAATACAGATTCTATTGCTGCTAAGATAGAGTTGGAAAAGCATAGATATAACATTCGCACAATATTGCAATGCTCCAACGCGACCCCGATCCGCGTGCATTTCCTCGGGATTGGCTATTTATGTTGCTTCTGTAAAGAATCTTTCGTCAAAGCTGCTGATCTCAAACGCCACACTGTTGTCGACCATGAcactaaaacaaaaagcaaGTTCAAACCCCCTGGAAATCTGACCAGGTTCTTAGTCAAACTAGACATCACCGACCTGTGCTGTAACATATGTGACTTGGCCCTTGCCACCCTTGATCAGTTGATCGAACACCTCAACAGTGTTCACGCAAAAAAACTCTACACGGACATAAAAAGTCACATCGTCAGCTTCAAATTGGACAGTGAAGAGTTCAAGTGTCATAAATGCTCCAAGGATTTCAACAGTTTTCGCTCCTTAGTATCGCATATGAATAAATACTCCTCAAACTTTATATGTGATGTGTGTGGTGTGGGACTCGTGAACCGATTCcaacttaaaatccattcgGAATCACACCAAAAAGGCTCGTTCAAATGCAGCTTTTGTGAAAAAGTCTCCTTATCAGCATATAAACGTAAAACTCACGTACTACAAGTACATACAGCGGCATTGGCAAAGTACAAATGCTTTCACTGCAGAGAACAGTTCAACAATCCGAATAAGAAAAAGAGACACATGGTTGAAGTTCACGGCGCGAAGTTCGCAGACTTGAAATGCAACGCTTGTGATAAGACATTTAAGAGCAACAGAAGTCTACATGCACACAAAAGGCAATATCATTCAATGAAAAGATGGGTTTGCCAGTGGTGTGATAAGATGTTCCTCTCAGGGTATAAACTGAAGCGGCACGAGTTGATACACACTGGTGTTCGGAATTTCATCTGCGAAATTTGCACGAAAGCTTTTTCCAGGAAATGCTCGCTCAAAGAGCATTTGCgtGTCGAGGACAATACCATCATTGGAATAAAACCAGAGGTTTCTGTCAAAGTTGAAGAAATAACCTACGAACTCAATGTGACTGAAGAGCTTGATACACAAGACATTGACATCAAAGCCGGACTTGTATCTcaagaaaacaaaattgtgCTGACTGATAAATCAGCAGTTGCATCAGCTAATACAGACTCATCAAAATTGCAAGTCAAAGTTAGACCTGAAACACAGCACGCGCGAACACTTCCACCAAAACCTAAAATAAAGAAACCATTAAAGAATACAGATTCTATTGCTGCTAAGTCGGAGTTGGAAAAGCATAGATATAACATTCGCACAATACTGCAATGTTCAAATGCGACCCCGATCCGCGTGCATTTCCTTGGGATTGGCTATTTATGTTGCTTCTGTAAAGAATCTTTCGTCAAAGCTGCTGATCTCAAACGCCACACTGTTGTCGACCATGAcactaaaacaaaaagcaaGTTCAAACCCCCTGGAAATCTGACCAGGTTCTTAGTCAAACTAGACATCACCGACCTGTGCTGTAACATATGTGACTTGGCCCTTGCCACCCTTGATCAGTTGATCGAACACCTCAACAGTGTTCACGCAAAAAAACTCTACACGGACATAAAAAGTCACATCGTCAGCTTCAAATTGGACAGTGAAGAGTTCAAGTGTCATAAATGCTCCAAGGATTTCAACAGTTTTCGCTCCTTAGTATCGCATATGACCAAATACTTCTCAAACTTTATATGTGATGTGTGTGGTGTGGGACTCGTGAACCGATCCcaacttaaaatccattcgGGCACACATAAAAAAGGCTCGTTCAAATGCAGCTTTTGTGAAAAAGTCTTCTTATCGGCTTATAAACGTAAAACTCACGAACTACAAGTACATACAGCGGCATTGGCAAAGTACAAATGCTTTCATTGTGGAGAGCAGTTCAAGAATCGGAATATCAAAAAGAAACACATGGCTGATGTTCACGGCGCGAAGTTCGCAGACTTGAAATGCAACGCCTGTGATAAGACATTCAAGAGCAACAAAAGTCTACAgacacacaaaatacaatatcACTCGATGAAAAGATGGATTTGTCAGTTGTGTGATAAGGTGTTCCTCTCAGGGTTTAGACTGAAGCGGCACGAGTTGATACACACTGgTGTCGAGGGCGATATCATCATTGAAATAGAACGAGACGCTTCTTTCAAAATTGAAGATACATCCTACGTATTCTATATACCCGAAGAGCTGGATGCACACGACATAGATATCGAAACCGGACTTGTATCTCGAGAAAACAAATTTGTGTTCAGTGATGAATCAGCAGTAGTATCAGCAAATGCAGACTCATCGAAATTGCAGGTTAAAGTTGAACCTGAAACACAAGCGCGAACACTTCCACCAAGacctactataaaaaaacCATTAATCAATACCAATTTAATTATTGCAAGGTCGGAGTTCAGAAAGCATAGATATAATATTCAAACAATATTGCAATGTTCCAACGCGACCCCGATCCGCGCGCATTTTCTCGGGATTGGCTATTTATGTTGCTTCTGCAAAGCATCCTTCGTCAAAGCCGCTGAGCTCAAACGCCACACCATTTTAGACCATGACGATACTTTGAAAAACAAGTTGATACCCCGTGGTAATATAAGCAATTTATTAGTCAAATTAGATATCACCGCACTGTGCTGTAATATTTGTGACTTGGCCCCCGCCACCCTTGATCACTTGATCGAACACCTCAACAGTGTTCACGCAAAAAAACTCTACACGGACATCAAAAGTCATATCGTCAGCTTCAAATTAGACAACGAAGAGTTCAAATGTCTGAAATGTTCCAAGGATTTCAACAGTTTTCGCCACTTAATATCGCATATGAACACATACTTCTCGAACGTGATATGCGATATATGTGGCTCTGGATTCGTGAACCTAGACCAACTTACTAAACATAGGAACACACATCAAAAAGGCTCGTTCAAATGCAGCTTATGCGAAAAAGTTTTCATAACTGAAACTAAACGTAGAACTCACGAACAACGTGTACATACAGCAACATTGACAAAGTACAAATGCTTTCACTGCGGAGATCAGTTCAAGAATTcgaatattaaaaagaaacacaTGGTTGAAGTTCACGGCGTGAAGTACGAAAATGTGAAGTGCAACGCCTGTGATAAGTCATTTAAGAACAGTACAAGACTATATACACATAAAATCCATTATCATTCAATGAAAAGATGGAATTGTCAGTTGTGTGATAAGTTTTTCCTCTCAGGAAATACTCTGAAGCGGCACGAGTTGATACACACTGGTGTACGGAATTTCATCTGCGAAATTTGCACGAAAGGCTTTTTCAGAAAATGGTCGCTTAAAGAGCATTTGCgTGTCGAGGACGTCGTCATTGAATTAGAACCAGACGGTTCTTTCAAATTTGGAGATATATCCTACGTATTCAATGTACCCGAAGAACCGGATACATACGATATTGATATCGAAACCGGACTTGTATCTCAAGAAAACGTGTCGTGTGATGAATCGGCAGTTGTATCAGCTTCAGCATATACAGACTCATCGAAATTGCAGTTCGAAGTTAAACCTGAAACACTATTAGCGCGAAAACTTACACCAAGACcgaattataatattaagaaaCCATTAATGAGTACCAATTCAACTCCTGTAATGTCGGAGATTGGAAAGCATAGATATAATATTCGAACAATACTGCAGTGTTCCAACGCGACTCCGATCCGTGCGCATTTCCTCGGGATTGGTTATTTATGTTGCTTCTGCAAAGCATCATTCGTCAATGCTGCTGATCTCAAACGCCACACTATTGTAGACCATGAcactaaaacaaaaagcatGTTCCAGCCTAGTCCATGTCTGTCTAATTTGTTAGTTAAACTAGACATCACCGCACTGTGCTGTATTATTTGTGACTTGGCCCCTGCCACCCTTGATCAGTTGATCGAACACCTCAACAGTGTTCACGATAAAAAACTCTACACGGACATAAAAAGTCACATCGTCAGCTTCAAATTGGAAAgTAAAGTGAAAATCAAACTGGAAGTCATTAATGACATTAACGAAGAAACAAATGAAGACCCacgtaaaaaagaaaaaggtatCAAATTAGTAAAGCACCTCCATGATACGAAGGCTCCTAACAGTCTTACGTATAAAAGACTACAACAAAATCTGAGGCAGATCATTCAACATTCGAACGCCACACCGATTAGACGTGTCAACGATTTGGATTACGTCTGCGCTTATTGCGAGTATCAAACTCCAAATCCGGCCGATCTAAAAAACCACACGATCGAAAATCACAATACAGAAACGGTGGTTACATCGACTAAGCGAATGTCTGCACACGATTTACTTGTTAAACTAGACATCACTGCTCTCAGCTGTAAGCTTTGCAATCAGAGCTTGGATAACTTGGAGTTACTTCTTGACCATCTGCAAACTGCACACAGCAGAAAGATCCATACTGACGTCCAAAACCAAATCTTGCCTTTCAAATTTGGTGACGGTCCCCTCACTTGCTTCATCTGTGACGCTTCCTTTCCCACTTTTAAGATGTTGAACGTGCACGTTAATACGCACTACAGACACTACGTATGCGAAATCTGTGGTCTAGGCTTCGTAAATCCAAATAAGCTTGGAAAGCACATGCTTACCCATAAAACTGGCACATTCGTCTGCTCACATTGCTTCAAAGACTTTCCGACTAATGTGAAAATGAAGGCACACGTAAAACAAGTTCACGGGCCGAAATTGAGACTTAAATGCTGGCATTGCAACGAGAGATTCGGGGATATTGTAGTAAAAGAGAATCACATGACAGAAGCTCACGGAATCGTATTCCCTACGCCTAAATGCGACTCTTGTgacaaagtatttattcatcGCAGGGCGTTAAACTCTCACGTGAAACGGGTACATTTGATGGATCGCCGCCATGAATGCCCTGAATGTGATATGAAGTTCTTCGCTTCTGCTGAGCTGAGGAATCATATGCTTAAGCATACGGGCGCTCGGCATTTTCAATGTCAAGTTTGTCTCAAACGGTACTCGAGGAAGAGCAACTTAACTGAACATATGAGGATACATGCGAACGATCGTAGATTTAAGTGCGAGCATTGCGGGATGACGTTTGTACAAAAGTGTAGTTGGAGGGGACATATTCGTAATAAGCATGGAGATATTGCTTAG
- Protein Sequence
- MAKYKCFYCGEQFKNRIGKRKHMVETHGAKYPDLKCACDTSVVGDIIIEIKPEVSVKVEDMTYEYNVPEELDTHDIDIKTGLVSQENKIVLSGESAVASAKPDSSKLQVKVRPETQQARTLPPKPNKKKPLKNTDSIAAKIELEKHRYNIRTILQCSNATPIRVHFLGIGYLCCFCKESFVKAADLKRHTVVDHDTKTKSKFKPPGNLTRFLVKLDITDLCCNICDLALATLDQLIEHLNSVHAKKLYTDIKSHIVSFKLDSEEFKCHKCSKDFNSFRSLVSHMNKYSSNFICDVCGVGLVNRFQLKIHSESHQKGSFKCSFCEKVSLSAYKRKTHVLQVHTAALAKYKCFHCREQFNNPNKKKRHMVEVHGAKFADLKCNACDKTFKSNRSLHAHKRQYHSMKRWVCQWCDKMFLSGYKLKRHELIHTGVRNFICEICTKAFSRKCSLKEHLRVEDNTIIGIKPEVSVKVEEITYELNVTEELDTQDIDIKAGLVSQENKIVLTDKSAVASANTDSSKLQVKVRPETQHARTLPPKPKIKKPLKNTDSIAAKSELEKHRYNIRTILQCSNATPIRVHFLGIGYLCCFCKESFVKAADLKRHTVVDHDTKTKSKFKPPGNLTRFLVKLDITDLCCNICDLALATLDQLIEHLNSVHAKKLYTDIKSHIVSFKLDSEEFKCHKCSKDFNSFRSLVSHMTKYFSNFICDVCGVGLVNRSQLKIHSGTHKKGSFKCSFCEKVFLSAYKRKTHELQVHTAALAKYKCFHCGEQFKNRNIKKKHMADVHGAKFADLKCNACDKTFKSNKSLQTHKIQYHSMKRWICQLCDKVFLSGFRLKRHELIHTGVEGDIIIEIERDASFKIEDTSYVFYIPEELDAHDIDIETGLVSRENKFVFSDESAVVSANADSSKLQVKVEPETQARTLPPRPTIKKPLINTNLIIARSEFRKHRYNIQTILQCSNATPIRAHFLGIGYLCCFCKASFVKAAELKRHTILDHDDTLKNKLIPRGNISNLLVKLDITALCCNICDLAPATLDHLIEHLNSVHAKKLYTDIKSHIVSFKLDNEEFKCLKCSKDFNSFRHLISHMNTYFSNVICDICGSGFVNLDQLTKHRNTHQKGSFKCSLCEKVFITETKRRTHEQRVHTATLTKYKCFHCGDQFKNSNIKKKHMVEVHGVKYENVKCNACDKSFKNSTRLYTHKIHYHSMKRWNCQLCDKFFLSGNTLKRHELIHTGVRNFICEICTKGFFRKWSLKEHLRVEDVVIELEPDGSFKFGDISYVFNVPEEPDTYDIDIETGLVSQENVSCDESAVVSASAYTDSSKLQFEVKPETLLARKLTPRPNYNIKKPLMSTNSTPVMSEIGKHRYNIRTILQCSNATPIRAHFLGIGYLCCFCKASFVNAADLKRHTIVDHDTKTKSMFQPSPCLSNLLVKLDITALCCIICDLAPATLDQLIEHLNSVHDKKLYTDIKSHIVSFKLESKVKIKLEVINDINEETNEDPRKKEKGIKLVKHLHDTKAPNSLTYKRLQQNLRQIIQHSNATPIRRVNDLDYVCAYCEYQTPNPADLKNHTIENHNTETVVTSTKRMSAHDLLVKLDITALSCKLCNQSLDNLELLLDHLQTAHSRKIHTDVQNQILPFKFGDGPLTCFICDASFPTFKMLNVHVNTHYRHYVCEICGLGFVNPNKLGKHMLTHKTGTFVCSHCFKDFPTNVKMKAHVKQVHGPKLRLKCWHCNERFGDIVVKENHMTEAHGIVFPTPKCDSCDKVFIHRRALNSHVKRVHLMDRRHECPECDMKFFASAELRNHMLKHTGARHFQCQVCLKRYSRKSNLTEHMRIHANDRRFKCEHCGMTFVQKCSWRGHIRNKHGDIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -