Basic Information

Gene Symbol
-
Assembly
GCA_951394285.1
Location
OX596159.1:8077595-8079677[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.59 1.3e+03 0.3 0.0 50 86 106 141 95 142 0.80
2 5 0.00032 0.74 10.7 0.1 27 86 177 235 156 236 0.77
3 5 0.12 2.7e+02 2.5 0.1 50 83 291 323 282 325 0.77
4 5 0.031 70 4.4 0.0 48 83 384 418 362 419 0.85
5 5 0.28 6.4e+02 1.3 0.0 17 42 446 471 434 504 0.83

Sequence Information

Coding Sequence
ATGAATTTGAGCAATCCAAATAATAGTCAAAGTTACTGGTTCGTCCTCAGAGAGGACCAAAGCAATGTCCTTATCAACAGCAACAATTTTACTATTCACAACCCAcagaTTGCAGGTCACGAAGCCAGATATGTTGTGGATACTGGGAATCGACAATTTATACAAATTAACGAAAACCTAATCACATCGCACGAAGTCTCTAATGACCATTTAAATGTAGACAACACTAAAAAGgaagaaaacaatttttggGATCGGAATAGAATTAAGTTGTTACTCACATTGTGCCttgaaaacaatttcaaaaacCCTGTCAAAGACCAATCGCTGCTGGAAGAAATCGCAGAACATGTTGGCACAACTCCTGATGAATGTTccactaaatataaaaatttaagaagAACATTCATTAGGTTACTTAGGAAAAGGAGAACAggcaaagaaataaaatggGTGCACTACGACATTTGCGAGAAAGTATTCAACGAGTGCAAATCACTGCCTCCTTCAGTTCTGGATCCCTGGgataaacaaaaagttataaaccTTTTGAACCTGTACATAGAAAACCTTACCAGATTTCGCAGTTCAGATTGTTTGCATAAAGATATTTGGAAAGACATAGCAGCTAAATTGGGTACTACGCAATATAACTGCTAccataagtataaaaatttaaaaagagctCATTTTAAATGGTTGCAACGGAGTCGCGAAACAGGTAAACCAAGCAAATGGCCATACCATCCGTTTTTTGAGCTAATATTCTACGAATACAACCCTAATGCTGGACAGTGGGACCGCGCCAAAACCAAAGGGCTGATGGACGCATATATTCGGATCGCTGACAAGTTCAGAAACTCAAGGTATCAGAAAAAGGACTTGTGGAAAGAAATAGGGAAAGTCGTAGGCGAGGACCCTACTAATTGTGACAAAAAGTTCCGAAATATGAAACAGACCTACCTAAAACTGAAAAGTAAAGTTAACACCGGAAGGGCTATCACGAAATGGAGATATTTCGAGGATTTCGAAAACATCTATGATCCCGCTCATCGATGGGAAACTGGCAGTACAGGAGCACTTGACAAAGACTATGTGAAGCAACTTTTGAATTTCTATCTAGAAAACAAGGAGAAGTTTAGAGATCAACGCATCAAGAAAAAACATGTATGGAGGCTGATTGCGCCTAGAATCGGACTAAGCCCTGAAGAGTGCGATAGAAAGTTTCGGAACCTGAAACAGACTTATTTACGCTTAGAGGACAAGAGGGACCATACGGGTCGAACAAGCAATTGGCCGTATTTCGATTATTTTAAGAGGATTTTTGATGAACCCAAGCAGACTCGAAAAAGGATTCCTCAGGTTAGTCTAGATGAAGTCACAATTTGTGATCTACAAAGGGTGGTACAGCAGGCAAATGTTAAAAAAGATGATGATAACTTCGACAAGTTGATAGTAGCCATGGATGAAGCAAATGATATTCAAAGAGaacgaaataatattttagcaAGATTACTAGAGAAGATACTAAATAATTAA
Protein Sequence
MNLSNPNNSQSYWFVLREDQSNVLINSNNFTIHNPQIAGHEARYVVDTGNRQFIQINENLITSHEVSNDHLNVDNTKKEENNFWDRNRIKLLLTLCLENNFKNPVKDQSLLEEIAEHVGTTPDECSTKYKNLRRTFIRLLRKRRTGKEIKWVHYDICEKVFNECKSLPPSVLDPWDKQKVINLLNLYIENLTRFRSSDCLHKDIWKDIAAKLGTTQYNCYHKYKNLKRAHFKWLQRSRETGKPSKWPYHPFFELIFYEYNPNAGQWDRAKTKGLMDAYIRIADKFRNSRYQKKDLWKEIGKVVGEDPTNCDKKFRNMKQTYLKLKSKVNTGRAITKWRYFEDFENIYDPAHRWETGSTGALDKDYVKQLLNFYLENKEKFRDQRIKKKHVWRLIAPRIGLSPEECDRKFRNLKQTYLRLEDKRDHTGRTSNWPYFDYFKRIFDEPKQTRKRIPQVSLDEVTICDLQRVVQQANVKKDDDNFDKLIVAMDEANDIQRERNNILARLLEKILNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00661066;
90% Identity
iTF_00661066;
80% Identity
-