Basic Information

Insect: Epirrhoe alternata
Gene Symbol: -
Assembly: GCA_963565295.1
Location: OY751385.1:1270176-1274026[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00076 0.051 14.6 0.9 1 23 299 322 299 322 0.92

2 10 0.026 1.7 9.8 2.4 1 19 337 355 337 359 0.92

3 10 7.7e-05 0.0052 17.7 0.8 2 23 365 386 364 386 0.96

4 10 0.0059 0.39 11.8 0.4 1 23 390 413 390 413 0.96

5 10 0.00028 0.019 16.0 0.3 2 23 556 577 555 577 0.96

6 10 0.44 30 5.9 1.4 2 23 597 619 596 619 0.95

7 10 1e-06 6.8e-05 23.7 3.2 1 23 625 647 625 647 0.98

8 10 0.0019 0.13 13.4 1.6 1 23 652 674 652 674 0.97

9 10 0.0049 0.33 12.1 3.4 2 21 681 700 680 703 0.95

10 10 0.25 17 6.7 1.5 3 19 743 759 742 764 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00076	0.051	14.6	0.9	1	23	299	322	299	322	0.92
2	10	0.026	1.7	9.8	2.4	1	19	337	355	337	359	0.92
3	10	7.7e-05	0.0052	17.7	0.8	2	23	365	386	364	386	0.96
4	10	0.0059	0.39	11.8	0.4	1	23	390	413	390	413	0.96
5	10	0.00028	0.019	16.0	0.3	2	23	556	577	555	577	0.96
6	10	0.44	30	5.9	1.4	2	23	597	619	596	619	0.95
7	10	1e-06	6.8e-05	23.7	3.2	1	23	625	647	625	647	0.98
8	10	0.0019	0.13	13.4	1.6	1	23	652	674	652	674	0.97
9	10	0.0049	0.33	12.1	3.4	2	21	681	700	680	703	0.95
10	10	0.25	17	6.7	1.5	3	19	743	759	742	764	0.94

Sequence Information

Coding Sequence: ATGGACACTGGAAACTTCGTTATCGACTCCGGCATGGCTTATCCAATTCTGTTTATCCCGAAGAAGTGTACAACACTTGAAACAAACTGTGAATTGACGGATAACGTGTACATAGAGGTGACCATCACCTCACCAGATTCCGAAGGCAACAGCACCATTATCTACAAGGGGTTCTGTAACATAAAGCTGGTGGACTCGTATGACGTGAATATAAACCAGGGATCACCTGATAATTCTACAGGAGATCCAGATATAGATCAGATGCAAGTTATCGTCTCCGAGCCGAATCCCGTGCCTGACAATGAGTCGCAGGTCTGGATAGATCCTTCTAGAAGCCCTTATGTATACAACCACTATGACCCAGTCATGAAGGAGCAGTATTCTATTCGTGAATCCGGAGGATTGATAAGTGTGGAAcaacataatacatacataactcAAAATGTGTACAACTGCAACGAATCAAATGTTTTTAGCTATAAAGAGGCACCACTGTCTCCGGTGAAGGATATAGAGTGTAAGAGGATGAGGAAAGTGCAGGAAGTAGTAACAAACCAGTCGGACACAAACATGGGGTATTATGAAGAGGATGAGTTTGAGTGCGGAGTGTTTCTGTCGCAGCTGCCCGGGGAGATCATGAATGAAAAACAGTCAAGAGCTAGGGATGAGAATAAACCTCAAGAACAGGAGAACAGTGCACTTAAACAGCTGATGTCCTCCGATATCCAATCAACGTCTAAACAGCGGAAGACCATCCTGTTCCTGGGCCATGACTCTCACTCGGGACATACAATACAGAACATTTCATACAACGACCCGTTGGTGAGGTGCGCTGAGATGGAGGTGGACAATGAAGTTGTTATTGACACATCATCAGCCCCAAAGAAGAAAAAATACCAGTGTGATAAATGCAAGCAGATCTTTGACCAGATATCCACATTCCGACAGCACATGGTTGGAAACCACACCAACTATCGACTGTCCAGTCAAACTGACAAGAAACTCAGCTTCATGTGCACTGACTGCGGCAAAAATCTTAAGAATCAAAGGAAATTTGAAATACACTGCCTCGGACACGGAGATCCAGACTTAGAATGCTCGGTATGCAGGAAAGTCTTTGCATCAAAATTCTCTCTTCGAATCCACAAGAAAATCCACAACAGGAAGTATCCTTGCAACTATTGCATAAAATCCTACGGTAGCTTTGATGAATTAAAAACTCATCTAGAAAAGattcactttttgtttgtgtgcTCCGATGAAAATTGCTCGTTCATAACTAGGAAACTCTCCGATCTAGATAACCATAAGCACTGGCAAAAGTCAGATAACGATACTATGTTGATAGAGCTGAAATCGGAGGTTGATGGACTGGCGCAGGAGCTGGTGAGGTCAAACCCTGacctctcaaggtctacaacaGAACTGTCAAAGTCAAATCAAGATCTCTCATCGGTTATAAGCTCAAACAACTTGTCGAACCAAGACTTATCGAGTGAGTATATTAAGTCAAGTTTTGAGAAATCCACTGAGGATTTGACAGCTACGTTAGAGGACAATGAGGGGAAGAGGATCAGGGAGGCTGATTCTGTGATCGCTAAAGTGATGTCGAACAAGATATTTTTGCTTAGCTCGAAGAAAGCAAGGAGGCATCGTTGTCGTAagACATGTGAAGTGTGCCTTAAATCTTTCGATCGGATCGATGATCTCAAAAGGCACCTTATCGAGCACGTCATAAGGTCCACTTTGGCGAAGACACCCGTCACTCGTACTGGCAGCTTGAACATTACTTGCGAGGTATGCCAAACAGAATCGTTCTGCAAAGTAGATAAATACAAAGCACATTTACGCGAGCACGCCAAACTAACCATCTACAAATGCACATTCTGCGACAAATCCTTCAGCGATGCTAGCAACTTCTCCAAGCACAAGAAAATCCACGGAGTTTCCTACTTCCAATGTGATCTATGCAGCCGCAAATTCAACTCCAAAAAGATGATAGCACAGCACATGGATTATCACAAGAAAACTTCGCCTGTCCAATGCAGTTATTGCAACAGAATATTTCATTTTGAATCCATGTTGAACAAGCATATTCGTTGCGCGCACAGAAAGGACGAAACTTGTAAGTTTCGCTGTAGATTCTGCAATGATTTCTTCAGGTCTTTGAAGGAGAAATGGGACCATGAATGGTCAGCACATAACGTGAGAAAGATGATAGTGGACTGTCTGATCTGCGGGTCCCAGTATAGGAAGTATTCGGAGTTGAAAAGACATTGCCTCGATGAGCACGATATGGTTATCCCACCAGCTAAGAAGTTGTTGAAGAGACGGTTTTTAAGAAAAGTTTCTTTTCATTGA
Protein Sequence: MDTGNFVIDSGMAYPILFIPKKCTTLETNCELTDNVYIEVTITSPDSEGNSTIIYKGFCNIKLVDSYDVNINQGSPDNSTGDPDIDQMQVIVSEPNPVPDNESQVWIDPSRSPYVYNHYDPVMKEQYSIRESGGLISVEQHNTYITQNVYNCNESNVFSYKEAPLSPVKDIECKRMRKVQEVVTNQSDTNMGYYEEDEFECGVFLSQLPGEIMNEKQSRARDENKPQEQENSALKQLMSSDIQSTSKQRKTILFLGHDSHSGHTIQNISYNDPLVRCAEMEVDNEVVIDTSSAPKKKKYQCDKCKQIFDQISTFRQHMVGNHTNYRLSSQTDKKLSFMCTDCGKNLKNQRKFEIHCLGHGDPDLECSVCRKVFASKFSLRIHKKIHNRKYPCNYCIKSYGSFDELKTHLEKIHFLFVCSDENCSFITRKLSDLDNHKHWQKSDNDTMLIELKSEVDGLAQELVRSNPDLSRSTTELSKSNQDLSSVISSNNLSNQDLSSEYIKSSFEKSTEDLTATLEDNEGKRIREADSVIAKVMSNKIFLLSSKKARRHRCRKTCEVCLKSFDRIDDLKRHLIEHVIRSTLAKTPVTRTGSLNITCEVCQTESFCKVDKYKAHLREHAKLTIYKCTFCDKSFSDASNFSKHKKIHGVSYFQCDLCSRKFNSKKMIAQHMDYHKKTSPVQCSYCNRIFHFESMLNKHIRCAHRKDETCKFRCRFCNDFFRSLKEKWDHEWSAHNVRKMIVDCLICGSQYRKYSELKRHCLDEHDMVIPPAKKLLKRRFLRKVSFH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00661728;
90% Identity: iTF_00661728;
80% Identity: -