Basic Information

Insect: Epirrhoe alternata
Gene Symbol: BCL11A
Assembly: GCA_963565295.1
Location: OY751385.1:3728952-3749079[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 4.6 3.1e+02 2.7 1.3 1 23 198 221 198 221 0.93

2 6 1.7e-05 0.0011 19.8 2.5 1 23 487 509 487 509 0.97

3 6 3.9e-07 2.6e-05 25.0 1.2 1 23 515 537 515 537 0.99

4 6 2e-07 1.4e-05 25.9 2.9 2 23 753 774 752 774 0.97

5 6 1.4e-05 0.00097 20.0 3.3 1 23 780 802 780 802 0.99

6 6 9.4e-05 0.0063 17.5 0.4 1 22 810 831 810 831 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	4.6	3.1e+02	2.7	1.3	1	23	198	221	198	221	0.93
2	6	1.7e-05	0.0011	19.8	2.5	1	23	487	509	487	509	0.97
3	6	3.9e-07	2.6e-05	25.0	1.2	1	23	515	537	515	537	0.99
4	6	2e-07	1.4e-05	25.9	2.9	2	23	753	774	752	774	0.97
5	6	1.4e-05	0.00097	20.0	3.3	1	23	780	802	780	802	0.99
6	6	9.4e-05	0.0063	17.5	0.4	1	22	810	831	810	831	0.97

Sequence Information

Coding Sequence: ATGTCTGGAGACCTGTCGAAACAAGCGGATGCGGACAGCGCGGCAGAAGGCGGCGGGTCGCCTACACCCGGGGTGCCGGCAGACACCCTGACCTGCGGGGCTTGCAGACGGGCCTTTGCACTGGCTGATATCGTGCGGTTCATCCAGCACAAGGTCTCGAGCTGTGATAAGGATCTCACTTCTTATCATTGTTATAGCACAGGACCCAATTCCGATCCTGAAGATGGCTCACGACCTGGCCAGGTGTCCACTGGGAGTGCGCGAAGACCATCTCTCCTCACGGCCAGGAGGCCACCTAGCAGCAGAATTCATACGCCACCACTCGCCAGCCCGTCGATAGCTCCACCTGACTTGCTTGAAGATGGCGGAGCTTCAAGCACACCGAAGAGACTGTTGGATGAAGCAGATAGAGAGACAGTGACGCCTAAGAGAAGAGCGTCAACCTCCCCGATGCCGTCAAGCTCGCCTGACGAAGACATCAAGCCTAAGATCAAGCAAGAACATATGGACACGTCAGGCTCGCCTGATGACGTCAAGAAGAGGACCTGCGCTGACGCTGAGTCGAACACTATGCATAGTGAACCCAGCAACTACGTGTGCTCGACTTGTAAAGCGCGTGTGCACTCAGCGTGGCGGCTGCTGCAGCATGTTCAGCACGTGCACGGCGTGAAGATCTACCAGGAGACCTTACCGCAAAACCATCATAAGCAGAACCACTCATCGTCTAGCTCCTCGTCTTCCAGCTCGGGGTGTTCGTCCAGCGGTGCCCCCCTCCCGCCGCCGACGCTCCGTCACCACCCCCTTTTACCCCCTCCAGATATGCATTCCCCTTTTGGGGTTGGTGGCTTGCTCAGAATGCCGTTACCTGGCAGCTTGCCACCGCTAGCTCATCCGTCGGTACCCCCCGCGCCCCTTTTCGCGCGACCAAACCATCACGACCACCGTTTTAGGATGGAACAGCTCGTGTCTGAGCAGTTCCGTCATCACGGTCTCAACTTAGCAGCGGCAGCGGCAGCCGTTGCGGCAAACTCCATGCCACCTCACCAAGCATTCCCGTCTCCGGCCGACCGGCCCCCGGTCGTGCCGACCTCGATCTCGGGTCGTGACCGACCCCCACCCGTATCCCAGCCCCTCTCACTTGAACCCCAGCTGGATTTTTACTCGCAGCGCTTGCGGCAACTGGCCGGTACGACCAGTCCAGGGGCGGCCACAGGCAATTCCAGCTCTCCTAGCCCCAGGAAGCATTCTCCTCCGTTCGCTTCCCCGTCGCCCTCCCGAGTCGGCCTGACTCCTCCGGTGGGCGCCGGACCCGGAACGGTGGACGCGCCCCGTGAGGCGACGCGGCCCCACAGCTCCACGTCGCCGGAGCGCCGCATCGAGCCGCGAGCCGCTGACGCTCCACCTCCGGAGAGGTCGTCATGCACTCCTCCTGTGAAGCGTAACAACGATGACGCAATCCATTCCTGTGAGTTCTGCGGTAAGAAGTTCCGATTAGAAAGCAATTTAATTGTACATCGCCGTTCTCATACTGGTGAAAAACCTTTCAAGTGCTCAGAATGCGATGAATCTTTTGAAAAAGCGTCAAAACTTCGAAAGCATATGAAAGTTCATCGGCTCTCTGCTACTAATGAAGAAGGTGAATCAGGTGGTGATACTGCTGAAGATGATACTGATGATGAGTTGGATGATGAGGAGTTAGATGGTGAGGAAGAAGAGGAGAATGAGGATGGTGAGGATGTTGAGGAAGCAGAGGATTTGACAGTTTCGAATAGTAGTGCTCCATCCGCCCCTACTAGAAAGCAGGCCCCTCTGATGCCCGCGCACCCACCCTCTGCATCTGTGGTCGGCGAGCTCATGGACAAATTCGGCCTCTCTAATATTGCTCAATACAGTGAAGCTTTCAAACAAGCGCTACAAGAATCAGGAAAAAATATGAACTGGCAGCTGGCCAAAGATCGTGATAATAACAACAGTCTACCCGGTGACAAGCCAAACGGCATGCCACCTGCTGCGCTGAGATTGAAGGAAGAATTTGCTAAGATGCCTCCTCAGCCGCATCCGCTTTTCAACCCTTTTGAAAACCCTTTCGAAGCTTCCAAACGCATGAAGCTAGATATGGAGCGAGGTGAGGGCTGGTGGCTACCTACCTTACATGCTCAAAGACCTCctgacaatattttcgatggCTTGAAGAACAGCACAAACGGTCTATTGCAAAATCCTCTGCTAAAAACGAAAGAAAGCCGACGGAACGACACTTGTGAATATTGCGGAAAAGTCTTCAAGAACTGCTCAAACCTGACTGTCCATCGACGATCACATACAGGCGAAAAACCGTACAAATGTGAGCTGTGCTCGTATGCTTGCGCTCAGAGCTCCAAGCTCACAAGACATATGAAGACTCACGGTAGGCTTGGGAAAGATGTGTACCGTTGTCGGTTCTGCGAGATGCCGTTCTCTGTGCCATCGACCCTGGAGAAGCATATGCGCAAATGTGTTGTGAACCAAAGTAACGGTGCTCCTCTAGCTCTCTCCGATGACTCCAACGCGTGTCGAGACGAGGCCTCGTGA
Protein Sequence: MSGDLSKQADADSAAEGGGSPTPGVPADTLTCGACRRAFALADIVRFIQHKVSSCDKDLTSYHCYSTGPNSDPEDGSRPGQVSTGSARRPSLLTARRPPSSRIHTPPLASPSIAPPDLLEDGGASSTPKRLLDEADRETVTPKRRASTSPMPSSSPDEDIKPKIKQEHMDTSGSPDDVKKRTCADAESNTMHSEPSNYVCSTCKARVHSAWRLLQHVQHVHGVKIYQETLPQNHHKQNHSSSSSSSSSSGCSSSGAPLPPPTLRHHPLLPPPDMHSPFGVGGLLRMPLPGSLPPLAHPSVPPAPLFARPNHHDHRFRMEQLVSEQFRHHGLNLAAAAAAVAANSMPPHQAFPSPADRPPVVPTSISGRDRPPPVSQPLSLEPQLDFYSQRLRQLAGTTSPGAATGNSSSPSPRKHSPPFASPSPSRVGLTPPVGAGPGTVDAPREATRPHSSTSPERRIEPRAADAPPPERSSCTPPVKRNNDDAIHSCEFCGKKFRLESNLIVHRRSHTGEKPFKCSECDESFEKASKLRKHMKVHRLSATNEEGESGGDTAEDDTDDELDDEELDGEEEEENEDGEDVEEAEDLTVSNSSAPSAPTRKQAPLMPAHPPSASVVGELMDKFGLSNIAQYSEAFKQALQESGKNMNWQLAKDRDNNNSLPGDKPNGMPPAALRLKEEFAKMPPQPHPLFNPFENPFEASKRMKLDMERGEGWWLPTLHAQRPPDNIFDGLKNSTNGLLQNPLLKTKESRRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQSNGAPLALSDDSNACRDEAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01209675;
90% Identity: iTF_00321895;
80% Identity: -