Basic Information

Insect: Epirrhoe alternata
Gene Symbol: -
Assembly: GCA_963565295.1
Location: OY751389.1:9071404-9074549[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.2e-07 8e-06 26.6 2.9 1 23 258 280 258 280 0.99

2 11 0.0014 0.094 13.8 8.6 1 23 286 309 286 309 0.97

3 11 0.0037 0.25 12.5 0.2 3 23 320 340 319 340 0.99

4 11 0.0018 0.12 13.5 4.6 1 23 347 369 347 369 0.97

5 11 0.013 0.91 10.7 1.7 1 23 375 397 375 397 0.99

6 11 0.0039 0.26 12.4 3.9 1 23 403 426 403 426 0.96

7 11 0.055 3.7 8.8 1.9 2 23 432 451 431 451 0.95

8 11 0.00022 0.015 16.3 4.5 1 21 457 477 457 479 0.94

9 11 6.6e-06 0.00044 21.1 3.3 1 23 485 507 485 507 0.98

10 11 3.7e-05 0.0025 18.7 0.9 1 23 513 536 513 536 0.97

11 11 0.004 0.27 12.4 1.4 1 21 542 562 542 563 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.2e-07	8e-06	26.6	2.9	1	23	258	280	258	280	0.99
2	11	0.0014	0.094	13.8	8.6	1	23	286	309	286	309	0.97
3	11	0.0037	0.25	12.5	0.2	3	23	320	340	319	340	0.99
4	11	0.0018	0.12	13.5	4.6	1	23	347	369	347	369	0.97
5	11	0.013	0.91	10.7	1.7	1	23	375	397	375	397	0.99
6	11	0.0039	0.26	12.4	3.9	1	23	403	426	403	426	0.96
7	11	0.055	3.7	8.8	1.9	2	23	432	451	431	451	0.95
8	11	0.00022	0.015	16.3	4.5	1	21	457	477	457	479	0.94
9	11	6.6e-06	0.00044	21.1	3.3	1	23	485	507	485	507	0.98
10	11	3.7e-05	0.0025	18.7	0.9	1	23	513	536	513	536	0.97
11	11	0.004	0.27	12.4	1.4	1	21	542	562	542	563	0.96

Sequence Information

Coding Sequence: atggCTAATGTAAAGGGTAGAGTAAAAGCACCCAAAAGTGCCAGTAGTAGGCGAGGCCGCGGTAATACAAAACAATCCTTGACAGGTGTGAAAAAATCAACAGAATCAGTAAAGAATGTAAAAGAAAACTATGTGCCAAGAAAGGCTGGGGATCTCACAGCATTACAGCAAGTTTTGATGCTAAATGAGCCGATAGACTTTGATAAATGTACTGAAAAACTTCTAAAACTGAGCCAACCACCAAAAGAACCAAAGAAAAGGGCGAGCAGAAAACCAAAAGTAGAAAAACTACCACGATTCACCACAAAAAGTGGAAGACTTGTCGGTCCTAGGACAAAGGAAGGCTTAAAAATGATTGACACTATACTGAAAGGAGAACTGAtgatagaaatagaaataccAACAAAAAGGGCTGAGAAAACAGTTGCTGCAACTGTAAGCAATAATAATGAAATGGGAATAAACAACCAGAACGGCACTATCCTGCAGCCTACTGATGATAACAAGAAGCCAgagcttaaaaataataaaacaattaaaatcaCTGAAAATGACAGCAAATCTGGAATTCAAACCAGAAGTAAACTCACACTCCCAGTTCAAAATGGAAAGAAGGAAACTAAAAGGCAAAAAATTATGAAGATAGACAAGACATCTAAAAATGGTGAGAAAAAGATAAACAAAAGAACTAAACCCAGTGCGGTGGTCAGTAAAGCAGTGAAAACAAAACAGGTTACTCTCAGTAATGGCTTAGTTCTCACTTTGGCACTGTTCCAGTGTGATTACTGCCAGAAAATGTTCAGCAGCAAAGCATCACTACGACGTCACATGTACACTCATCTTAAGCTGCAGCCTCACCGCTGCAAGCAATGCTCTAAAAAGTTCCGCTACAAACTCCACCTACAAAACCACATAAACAAATAccataaagatcacaaaaagTCGGAGCCTATGCTCTGTCAGATATGCGACAAAGAATTTCTTCTACAAGAGAATCTAGAACTCCATTTAAACACTCATATCAAAAATGAGAACTCTTTCAAATGTGTGTACTGTGACAAGAAGTTCTCATACCACCTTCTTTTAACGCAGCATGAGAAACAGCATCTTCTTACTGGCAAATATCAGTGCTCGGTTTGTCAGTTGAGCTTCGATTCAATTAATCGCTTAAAATTTCACATGAAAACTCATTTGAAAATAAAGGATTACATCTGCCAACATTGTGGAAAGGAGTTTTTAAGAATGAATTCATTGAGACGGCATGTTCAGATATGTCACAGTGGTCACCGTCTACAATGTCCGGTTTGCTTAAAGAAATTAAAGGGTCATTTAACTGAGCATATGAGGACACATAAACAGGCAAGGCCTCATGAGTGCGACCTATGCGGGCGACGTTTCACACAGTCTACCCAACTGACTGTTCATAGAAGATGCCATACTGGAGAAAGACCTTTTGTTTGCAAGATATGCAATCGTCAATTCACCCACTCCAATTCTCTGATGCTGCACATTCGCCGCCACACTGGAGAGAAACCTTTCCAATGTCCCCTTTGCCCATATTCCTTCTCCCAACTACCCCATATGAAGACCCATCTCATAAAAATCCACAAACAAGACACACCATACAAATGCCCAAAGTGCAGCGCATTCTTCAAAATGAAAAAGCAAATGGAAACTCATCTAAAGAACTGCAAAGTTGGCGACCGAGAGCTGACGTTTGAGGAGAAGATACAGGCGTCTGTGGAATATGAAGAGGTCAAAATCGAGACGCCAATGAGTCTATCTCGGATGCGGTACCTCCTGGCTCTGCTATTGACGATGATTGGAAACAAAAAGAGCCTGAAATTTCTAGGATTCAACAAACGGCCGATTGAAGAGCTACTTCTTGAGTCTATCGAAGCTATCGGATTGACGCCGTTCAAAGACGAAACTATTGCGCCAATTGTACGACTCAAAAACAACATTCGTCTACTTCTTGAAGGTACCATTCCAGCGTATCAAATGCAGAAGTTCAAAAAAGAACACAAGACCACCGAAGAAATTCTGGAGATATTGACGAACGAAAAGAAGAATGATTGA
Protein Sequence: MANVKGRVKAPKSASSRRGRGNTKQSLTGVKKSTESVKNVKENYVPRKAGDLTALQQVLMLNEPIDFDKCTEKLLKLSQPPKEPKKRASRKPKVEKLPRFTTKSGRLVGPRTKEGLKMIDTILKGELMIEIEIPTKRAEKTVAATVSNNNEMGINNQNGTILQPTDDNKKPELKNNKTIKITENDSKSGIQTRSKLTLPVQNGKKETKRQKIMKIDKTSKNGEKKINKRTKPSAVVSKAVKTKQVTLSNGLVLTLALFQCDYCQKMFSSKASLRRHMYTHLKLQPHRCKQCSKKFRYKLHLQNHINKYHKDHKKSEPMLCQICDKEFLLQENLELHLNTHIKNENSFKCVYCDKKFSYHLLLTQHEKQHLLTGKYQCSVCQLSFDSINRLKFHMKTHLKIKDYICQHCGKEFLRMNSLRRHVQICHSGHRLQCPVCLKKLKGHLTEHMRTHKQARPHECDLCGRRFTQSTQLTVHRRCHTGERPFVCKICNRQFTHSNSLMLHIRRHTGEKPFQCPLCPYSFSQLPHMKTHLIKIHKQDTPYKCPKCSAFFKMKKQMETHLKNCKVGDRELTFEEKIQASVEYEEVKIETPMSLSRMRYLLALLLTMIGNKKSLKFLGFNKRPIEELLLESIEAIGLTPFKDETIAPIVRLKNNIRLLLEGTIPAYQMQKFKKEHKTTEEILEILTNEKKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00119870;
90% Identity: iTF_00662474;
80% Identity: -