Basic Information

Insect: Epirrhoe alternata
Gene Symbol: -
Assembly: GCA_963565295.1
Location: OY751388.1:7386734-7397226[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00047 0.032 15.3 0.2 2 23 139 160 138 160 0.93

2 11 0.00068 0.046 14.8 2.4 1 23 166 188 166 188 0.96

3 11 6.9e-05 0.0046 17.9 0.2 1 23 285 307 285 307 0.98

4 11 4.5 3e+02 2.8 0.4 2 23 314 336 313 336 0.86

5 11 0.00024 0.016 16.2 0.0 3 23 389 410 387 410 0.90

6 11 0.057 3.8 8.7 0.6 1 23 425 447 425 448 0.93

7 11 1.1e-05 0.00075 20.4 0.2 1 23 475 497 475 497 0.98

8 11 0.00073 0.049 14.7 0.2 1 23 503 525 503 525 0.97

9 11 0.00041 0.028 15.5 0.3 1 23 531 553 531 554 0.95

10 11 0.3 20 6.5 0.5 1 23 569 591 569 591 0.97

11 11 0.0072 0.49 11.5 0.1 1 20 720 739 720 742 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00047	0.032	15.3	0.2	2	23	139	160	138	160	0.93
2	11	0.00068	0.046	14.8	2.4	1	23	166	188	166	188	0.96
3	11	6.9e-05	0.0046	17.9	0.2	1	23	285	307	285	307	0.98
4	11	4.5	3e+02	2.8	0.4	2	23	314	336	313	336	0.86
5	11	0.00024	0.016	16.2	0.0	3	23	389	410	387	410	0.90
6	11	0.057	3.8	8.7	0.6	1	23	425	447	425	448	0.93
7	11	1.1e-05	0.00075	20.4	0.2	1	23	475	497	475	497	0.98
8	11	0.00073	0.049	14.7	0.2	1	23	503	525	503	525	0.97
9	11	0.00041	0.028	15.5	0.3	1	23	531	553	531	554	0.95
10	11	0.3	20	6.5	0.5	1	23	569	591	569	591	0.97
11	11	0.0072	0.49	11.5	0.1	1	20	720	739	720	742	0.93

Sequence Information

Coding Sequence: ATGGATGGAGATCGAGAGTTCAACCTCCATTGGGGGGGAGGAGAAGTAGTTGTAAAGCATGATCCGGAAAGCCAACAAATATGCAGCATTGAAAGTGTACATAGTGACTACCAAAATATGACTCCAGAAGAAATAATGGCAAACACAGATCAAATGGCAGCGGAGAACCTCATGTTCTTAGCACAGGATGTGATTGGTTACACGGAGACTGCAGAACTGGCCGATGACCCAAGTGTTGAGTGTGTGACAGAGGAAGTTATCACGGATGATTGGGTTGTTGATGATGGACAGGAGAGGGTGGAAGTCCCTATGGAACATTTGTCAAGCACGATGGATTTACATGTAAAGGAAGAGAATGATGTTGATCTTCCAATACCAATAGACCAAGATGAGTACACAGCAATGCGACCATGGCCTTGCGATTTCTGCTCGCGTCGGTTCCGCAAGAAAGCGGCGCTGATGAATCACATGGTCGCGCATCAGAACGACCGGCCTCACGCCTGCAACCTGTGCGGAGTGCGATATGTTCGCAAGTGCGATCTTATGAACCATTTGAAGGTTCACGCGTTTGTGCCAGATAATGCAGATTCGGTCGACTTTGAAGAATTGCTAGAGAATAACCAAATTGCAAAACCAAAGAAAAAGCGAGGCAGGCGGAAAAAGATACCAGAGCCAGAAGAGGATGAGTGGGAAAACATGACATCGGCTCGCACTCAGCAGTGGTCAAGACGCGGGCGGTCACCAGCAAAGCCGCCGCCATCGCCGCCACCACTGTCGCCGCCATCGCCCGTGCCATCGTCACCGCCGTCACCACCatcaccgccgccgccgcccgctgATCCTTCTCGACCTTTCGTCTGTAAGACTTGCGGCATCGGCTTCGCGAGGGAGAAGGCGCTGCAGTCGCATTCTAGGGTTCATGGAGGCGATTCCCCGGTGGAATGCAGCGAGTGCGGCGAGCTGTGCTGGTCACGGGATGCTCTCGCCACGCACTCGCAGCAGCGGCATCCGCACTTGCCGCCGCGAACTGCGCAAGACACCAATTACAATGAGTCTGACTCTGGTGATGACATGGATTTCCGTTTATCTCCGGAATCAGCTCCAAGCGGCGGCGGCGTGCCAGAAAGGCCGGTGTACGACACGATGCGTGGACCCGAGCTCTTCTGTCCAGACTGTGGCGTCGCTTTCCAACGCGCGGATTTGTTGAGGCGGCATGTTGCCGCCGCGCATAGTTACAAGCGGGTCTCGCGTGAGAGCGGCTCGGGCTGGGAGCACACGTGCGACGCTTGTGGCGAGGCGTGCAGCGACGCGCTGCAACTGCTCGCGCATGCCGAGCTGCAtcaccgccgccgcccgcccgcCAGGTTAAAAAAATCGTCCAAAGGACGTAATAGCACGTCGATATCCAGTAATTCACGGCAATTCCCTTGTAGGGAGTGTGGCAAAGTGTTCGGTTCGCGAAGTTCCCAGCAGATTCACATTCGGATCCACACGGGCGAAAGGCCGTACGCGTGCCGTTTTTGTTGGAAGGCTTTCGCTGACGGTGGCACTCTTAGGAAACACGAGAGAATACATACGGGTGAAAAGCCATATGCATGCGCGGTATGCCCCCGCGCGTTCAACCAGCGCGTTGTGTTAAGAGAACATGTCAGATCACATCACTCTGCGCCTGACCGCCGACAGCAGGCTAAcgGTGGTGCGGCGTATTCGTGTGTTGTTTGCTCGCGGTCTATGCACACTAGTGTAGAATTGGTGCAGCATTTGATTCAGCATTGCGATGCAAATACCGCGTTGAAGAGACAACCGCAGAACGGTCCGAGGAAATACAAGCGGCGGCGGAAGATAAAGAGCGAGGTATCACCAGTGCGGCGCGAGTGGACGACCCCCTCCCCGGCGCAGTCTCCCTCCCCTCCCGCGTCCCCTCCTGCGTCTCCTCCCCCATCTCCCCCGCGTCGTCGCACCCGCCGCGAGCCGCCGCCGCGACCTAGGATGATACACACCTCGGAGGAAACTAAGACTAGGAAGGTTAAGACTGTACGTCAACGTCGTCCGCCGCGTCACCCGGCCGACGACCTCCGAGCTATCGGGCCGCATTCGCCATCACCAAAGCGCGAGCTCTCACCTCAACCCGAAGAAACCCCCGACGAAGGGGGCCCCTATAAATGCGAAATGTGCTCGCTGGAGTTCCCCCGGAGGGACGCGTTGTTACTACACGTGCCGGTTCATATATGA
Protein Sequence: MDGDREFNLHWGGGEVVVKHDPESQQICSIESVHSDYQNMTPEEIMANTDQMAAENLMFLAQDVIGYTETAELADDPSVECVTEEVITDDWVVDDGQERVEVPMEHLSSTMDLHVKEENDVDLPIPIDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPDNADSVDFEELLENNQIAKPKKKRGRRKKIPEPEEDEWENMTSARTQQWSRRGRSPAKPPPSPPPLSPPSPVPSSPPSPPSPPPPPADPSRPFVCKTCGIGFAREKALQSHSRVHGGDSPVECSECGELCWSRDALATHSQQRHPHLPPRTAQDTNYNESDSGDDMDFRLSPESAPSGGGVPERPVYDTMRGPELFCPDCGVAFQRADLLRRHVAAAHSYKRVSRESGSGWEHTCDACGEACSDALQLLAHAELHHRRRPPARLKKSSKGRNSTSISSNSRQFPCRECGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRQQANGGAAYSCVVCSRSMHTSVELVQHLIQHCDANTALKRQPQNGPRKYKRRRKIKSEVSPVRREWTTPSPAQSPSPPASPPASPPPSPPRRRTRREPPPRPRMIHTSEETKTRKVKTVRQRRPPRHPADDLRAIGPHSPSPKRELSPQPEETPDEGGPYKCEMCSLEFPRRDALLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00377360;
90% Identity: iTF_00662470;
80% Identity: -