Basic Information

Insect: Epirrhoe alternata
Gene Symbol: -
Assembly: GCA_963565295.1
Location: OY751400.1:7394309-7397270[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0086 0.58 11.3 1.9 1 23 208 230 208 230 0.97

2 16 6.6e-07 4.5e-05 24.2 0.4 1 23 236 258 236 258 0.98

3 16 6.6e-07 4.4e-05 24.3 1.4 2 23 265 286 264 286 0.96

4 16 2.8e-06 0.00019 22.3 2.3 1 23 292 314 292 314 0.98

5 16 3.1e-07 2.1e-05 25.3 2.2 1 23 319 342 319 342 0.96

6 16 3.5e-05 0.0024 18.8 2.4 1 23 348 370 348 370 0.98

7 16 1.6e-07 1e-05 26.2 0.7 1 23 376 398 376 398 0.98

8 16 1.4e-05 0.00095 20.1 1.8 1 23 404 426 404 426 0.98

9 16 0.00014 0.0091 17.0 2.5 1 23 431 453 431 453 0.98

10 16 8.9e-05 0.006 17.5 4.2 1 23 464 486 464 486 0.97

11 16 4.4e-08 3e-06 28.0 1.8 1 23 492 514 492 514 0.99

12 16 2.3e-06 0.00015 22.5 0.3 1 23 520 542 520 542 0.98

13 16 9.1e-06 0.00061 20.7 0.5 1 23 548 570 548 570 0.98

14 16 9.4e-06 0.00063 20.6 1.2 1 23 576 598 576 598 0.98

15 16 1.7e-06 0.00011 23.0 2.0 1 23 604 626 604 626 0.99

16 16 0.00015 0.0099 16.9 0.3 1 20 632 651 632 652 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0086	0.58	11.3	1.9	1	23	208	230	208	230	0.97
2	16	6.6e-07	4.5e-05	24.2	0.4	1	23	236	258	236	258	0.98
3	16	6.6e-07	4.4e-05	24.3	1.4	2	23	265	286	264	286	0.96
4	16	2.8e-06	0.00019	22.3	2.3	1	23	292	314	292	314	0.98
5	16	3.1e-07	2.1e-05	25.3	2.2	1	23	319	342	319	342	0.96
6	16	3.5e-05	0.0024	18.8	2.4	1	23	348	370	348	370	0.98
7	16	1.6e-07	1e-05	26.2	0.7	1	23	376	398	376	398	0.98
8	16	1.4e-05	0.00095	20.1	1.8	1	23	404	426	404	426	0.98
9	16	0.00014	0.0091	17.0	2.5	1	23	431	453	431	453	0.98
10	16	8.9e-05	0.006	17.5	4.2	1	23	464	486	464	486	0.97
11	16	4.4e-08	3e-06	28.0	1.8	1	23	492	514	492	514	0.99
12	16	2.3e-06	0.00015	22.5	0.3	1	23	520	542	520	542	0.98
13	16	9.1e-06	0.00061	20.7	0.5	1	23	548	570	548	570	0.98
14	16	9.4e-06	0.00063	20.6	1.2	1	23	576	598	576	598	0.98
15	16	1.7e-06	0.00011	23.0	2.0	1	23	604	626	604	626	0.99
16	16	0.00015	0.0099	16.9	0.3	1	20	632	651	632	652	0.91

Sequence Information

Coding Sequence: ATGAAAGAATTGTTTGAGATGCTAGCAAATAATAAGctgACCACAGATGACAGGAGACCAGAGATGTTGTGCTATATTTGCTACTCTCAACTGCAACATTGTCTAAGATTTATGCACAGGTCTCGGAAAGCCGATAAGATTCTAACACACCTGATTTGTAATGGCTTGAAGATAACACAAGAGGCAGTGAAATTGTTGAACGGAGGTGCACCACTTTGTTCCGCTATTCATATTCAGCCTACTTCATACCACTGTTATGATAATGATATGGAGTACAGTCTGACTGTCAAACAAGAATGTGATGCATATCTGAATGAGTTTGATGATGAATACTGTCATGATGATGTCAAGTTGGATGCTGATGATTTATCTACATCAGAAAAAGTGCCTGATTCAAAAGAAATCAAACATGAAAATCAAGAAGAGATGAAAGTCCATGAAAATGGTGACCATATTTTTGTACAGACAAGCAGAGTTATAGAAGAACAAGCGAATAACTGTCATACAAATGATACAACTGAGTCGATACCCAGAAAAATAAGTTCATCAAagaaatcaaaaaataatatcaatgGCAGGAGTTCTAAAAACAGACATAACAAGCGCCTCAAGAAAAATCTGTTTGCCTGCAAGTATTGTGAAAGAATTATGGCAAACAAATATGATTTACACCAACACCTTACTACACACGCTGGCGACAAGCCATATGCGTGCACTATTTGTGGAAAATCCTATTCAGAGAAATCAGTTCTAAAACGACACATAAAAGTTCACTCCGGCGAACGACCATGTGCTTGCAATGTTTGCGGGAAATCATTTCCTGAAAACAGTGACGTCAAAAAACATATGAGAACACACACAGGCgtaaagccatatgcctgtcaTATATGCGATAAGAAGTTCTACGAAAACAATCAATTACAAAATCATATAAACACTCATACAGGAGAAATTTTTTCCTGTCAGATATGTGGTAGGACATTTTCTAAGAAAAGTCAGCTGAAACGGCATGTTAGCAGAATGCATTCTGGAATCAAGCCGTATGCATGCGAACACTGTGATAAAAAGTTTTACGAAAACAACAAGTTACAAAGTCACATCAAAGTGCATACAGGTGAAAGACCGTATGCCTGTAATGATTGTGAAAAAACTTTCATCAACAAACGCAACTTAATCATTCACATGAGATATCACACAGGTGACAAACCATATTCTTGTGAAGTGTGCGGCAAGAAGTTTATGTCAAGCAACACATTAAGAAACCACTCAAAAACACATGTAGATAACGCGTTTACTTGTGATATTTGTGACAAAACTTTTAACGTTTTAGATTACTTGAAATGTCATATGAAAATCCACTCAGTCGAAAGGACAAGACCTGACTCCACTTTCGCGTGCGATCGTTGCGGTAGGACATTCTTCGACAAGTGCGTGCTAAAAAAACATATGAAAACGCACACAGGCGAAAAACCGTATGTCTGTAACAAGTGCAATAAACGTTTCACAGAAAAAGGCAACTTAAAACGTCACATACGTATTCATACAGCGGAGAAACCCTACGCTTGTGACCTTTGCGACAAGTCCTTTGCGGAAAGTGGAAACTTAAAGACGCACAAGCGAgttcacactggagaaaaaccTTTTTCTTGTGACGCGTGTGGTAAAGGCTTCGCGCAATCCAATTCGTTAAAGAAACATCTTACAACACACACCGGAGAACGACAATTTTCCTGCATGATATGTTACAAAACTTTCACAGCTAGTAGTAGCTTGAAAATTCACCAGAGAATCCATAGCGGTGAAAAGCCATATTCTTGTGGCATTTGTAATAAATCATTCTATGAGAGCAGTTCCTTGAGCCGCCATAAAAGGACGCATACGGGAGAAAAACCATATATTTGCATTGAATGTAACAAAACGTTTAGTAGAAAGTCTTACTTACAACAGCATGTTGCCTTCTGTAAACAGGGCTAG
Protein Sequence: MKELFEMLANNKLTTDDRRPEMLCYICYSQLQHCLRFMHRSRKADKILTHLICNGLKITQEAVKLLNGGAPLCSAIHIQPTSYHCYDNDMEYSLTVKQECDAYLNEFDDEYCHDDVKLDADDLSTSEKVPDSKEIKHENQEEMKVHENGDHIFVQTSRVIEEQANNCHTNDTTESIPRKISSSKKSKNNINGRSSKNRHNKRLKKNLFACKYCERIMANKYDLHQHLTTHAGDKPYACTICGKSYSEKSVLKRHIKVHSGERPCACNVCGKSFPENSDVKKHMRTHTGVKPYACHICDKKFYENNQLQNHINTHTGEIFSCQICGRTFSKKSQLKRHVSRMHSGIKPYACEHCDKKFYENNKLQSHIKVHTGERPYACNDCEKTFINKRNLIIHMRYHTGDKPYSCEVCGKKFMSSNTLRNHSKTHVDNAFTCDICDKTFNVLDYLKCHMKIHSVERTRPDSTFACDRCGRTFFDKCVLKKHMKTHTGEKPYVCNKCNKRFTEKGNLKRHIRIHTAEKPYACDLCDKSFAESGNLKTHKRVHTGEKPFSCDACGKGFAQSNSLKKHLTTHTGERQFSCMICYKTFTASSSLKIHQRIHSGEKPYSCGICNKSFYESSSLSRHKRTHTGEKPYICIECNKTFSRKSYLQQHVAFCKQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -