Ealt000501.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epirrhoe alternata
Gene Symbol
REF6
Assembly
GCA_963565295.1
Location
OY751375.1:5388946-5403505[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-14 1.5e-10 41.9 0.0 17 89 614 686 599 686 0.84

Sequence Information

Coding Sequence
ATGCGATTACGAAGCATCGTGTCCACCAAGTATCGATCTTGTCGTGCTGTGGTGGTACACCTGGTTCTGCCTGTTCCTGGTCTGCattcAGTTTCTCCTGTGCAAACAACTGAATCAACTACTAACCAAACTGATTCAGAGATCCCTGTAAAGACGCCGGCAAAAAGCTGTTTGCATGACATCCCATTTCAATTACCACCAGGCTTAGTAACCCGTACTCAGTTAAACAAATTTAATTGTCCCTCTCATTTAATGAATGGCCTGCAGGAGCTGCTAAGCATCACGCCAGGCACATATAACTACTGTAAAATATGTAAACGCTGCGAATTACTTTCGAAATACGAAAGAGTGCTTGACATGCTGCCAGTGAGCGATGATAACGAGCCGGATATCCTGGAGGCGACTCCACCTGATGTCTATGATTTCGATTCTGAAGACGAGGGGTTGAAACTCCTTAGGCGAGGTCGCGAGCTTGTCCGTAACGTTCTCACCACAAAGAGGTTCCCAATCTGGCTAAGCAATTTGGAAATGACTTTGAAGAAAACAATGTTTCAAGATGCAAACAAACTTGGGACACTACAAAGGAATATCTCATTGGAAAAAGATGATGTTACGGTGAACAAAATCATCACAAGGATTGATTATCTGAACCAATGTTTGACAGAAGACAAAAAAGAATTGGATGCAATGAAGCCCAAACGTAAGACAAAATCTTCAAAGAAAGTAGTTGTGCCACGTGGTAAACGGTTGTCCAAGATGACTAAGACAGGACTTAAAAAACTAAAGACAAGTTTAATTCCCACCTCAATTGAATCGGGATACGCAATTACTGACGCAGAGAGAAGTCCACAGCAAAGCCCTTCCAGTACACCATCAGTTTCCAGCTCAGTACCAAACGTGTCCAACAACCTAAAACTTAAATTGTTTGCTACATCAACAGGCACCTATACTACTACCGCACCAAAAGCAGACGTCTCTATCACTACCGCACTAGAAGAAGACTTCTCTATCACTACCGCACCAGAAGAAGACTTCTCTATCACTACCGCACAAGAAGAAGACTTCTCTATAACTACCGCACCAGAAGAAGACTTCTCTATCACTACCGCACTAGAAGAAGACTTCTCTATCACTACCGCACCAGAAGAAGACTTCTCTATCACTACCACACCAGAAGAAGACTTCTCTATCACTATCGCACCAGTCACTACCGCACCACAAGAACACCTCTCTTCCTATATTCCACGACCTCATGTAAACATAGTAGAAGGCGTCTCTTCATCAATGAAGCTTTACGTAGAGGCCGGCAAACCACGGGTCAAAAAGTCCACACTTGAACCAGTAGAGCCACCTAAAGTGCCGCCTAAAGGAATTTCTTCAGATCATGACATAAATTTAACACAACTAATGGAATGGTGCTCGAAAGAATTAGCTTCAACAGTAACTAGTTACTTTAATAGTTCCCTGGCCGAGACACCGGGTTTGGAAATCAGCAATTCCTTAAATGTCCCAGGAAATAAAAGTCCTATACTTAGtttggaaaaaaaacaaaatttagtGCACAAGTTCACTTCTGTGGACAAACTCACCTATAGGCCTACACTAGAAGAATTTGAGgaCCCAATAAAATACATGCAAAAAATTCAATGTGAAGCATCAAGGTACGGCATTTGCAAAATCATACCTCCTAAAGAATTTCATGTTCCATGCCATCTAGATGACAATAGTATGTTTACAACAATCAACCAGTATCTAGGACGTCTGTATCAACGATGGGGACCGGCAATAAGAGAGATGACAGGAATACAAGTATATCTTACGAAGATAAATCCAAGAGAGAAGGATAATTTTATGAAATGTCCAATGTTTGACGGGGTGGAGCTAGACCTTGTGAAACTGCACAACGCGGTTCTCCTGCACGGCGGCATTGAAGAATTACTGGCTCACAGAGAGTTGTGGGTTCGCATAGCACAACAGTTGTCCCTCGTTTCGCCTCGAGGGAAGCCGGACCACAAAAAGTTAGAGAAACTATACTGCAAGCATGTGCTCCCATACGAATCCATGACATCtgACGACCGCGATTGTCTCTTCTCGATGATTGACGTCTTGTGGAAGGAGCGGTATCAAAATTTGACGCGGCGAGCGAATCGCCCTCTGCACTACCAGAAACGTATGCTCGGCGAATGCGAAAGTGATGATGAAGAGCCGCCATTGGATCCCTCGTGCAAAACAATACGCACTATTAGCAAGCCTTGCTTCGACCGCATTGAAGAATGCACTGCGAAAGGACGCACTATGAACCTCACTACTTACCGTCGGATCGCTTCACAAATATATGCGATGCGTTTCCCGCCGGGCGCCAAAGCCAAACCTACCACGGAAGAAATCGAAGACGAATATTGGAAAATTCTGTCAGAGGGCAAGGAGCATATATGCGTGCTGTCGGCTTGCATAGACACGTCTGTCGACAAACTGGGCCACACTTACCATCGCAATGGGCCGGGCGGTAGCCATCCTTGGAACCTCAAGAGGCTTGGTGAGAACCCCCTTAACGTGTTGAGCTTCCTGGGCAAGACGTTGAGTGTCACGGAGCCAACAATGTGCCTAAATCAACTTTACAGTACCAATTGTTGGCATAAAGACCCGCATCTACTTGCGTGGATGGATTATATGCACGAAGGTGACACTAAGATTTGGTACGCGGTATCAGAAAACGATTCTGGAGTATTTCGCGAGACGATGGAACATTTGGCTCCCTTCGCCGTACAGAATAAGGGCATATGGCTGACTTCTGATACCACTATGGTACCACCGGGTATGCTTCTCGCCAATGGCGTCAAACTACAACGTATCGAACAAAATCCTGGCGAGTTCATCGTTGTCTTTCCCGGAGCTTATGCTTCCTCTATCGCCACCGGACACTCTATATCTGAAAGCGTCTACTTCGAAACCAAAGAGTGGATGTACAGCATCGATGATATCTTCCGGCAAATGCGAGAAGACCACGAGCCGGGGATGTTCTCGAACATCGTGCTGTTGTTCCGGATGGCTCGTGACCCCATGGCCAGCTTAGATGTTATGCCGTTTATTCATGAATCCATCAGCAAAATCGTTGATACCGAGATAAACATAAGGAAAGAGGCGGCCGAACTCAACTTCGAGATCATCTATGTAAACACTATTCTATCTAAAGTGAAGCTAGAGGGGCATGGGAACCGTGGGCCGGTTTCGTGGCCCAACCAAGAAGAATGCAGTATCTGCCGTGCGCCACTCATTCTATCCAAGACGGTTCGCTACAACGAAACTCGATTATTGGTATGCTTGAAACACGGCATTCAGCTATATAAGGCTGCGCCGGTGGAAGACCGTGGGACACCCCCGCCCGTCACCGTTTTATACAGCGAAGAAGAACTCATGGATATACTGGACTTTGTGTGGCGTCGCATTACCGAAGACGGGAACGTCTTCGAGAAAGAAGGTATTGGTTTGTTGCCCCTAACTATACACTCGACAAAGAGCTCAGCCACAGCTCAGCTAAGTTTAAAAAACAAAGACCACAGTTAA
Protein Sequence
MRLRSIVSTKYRSCRAVVVHLVLPVPGLHSVSPVQTTESTTNQTDSEIPVKTPAKSCLHDIPFQLPPGLVTRTQLNKFNCPSHLMNGLQELLSITPGTYNYCKICKRCELLSKYERVLDMLPVSDDNEPDILEATPPDVYDFDSEDEGLKLLRRGRELVRNVLTTKRFPIWLSNLEMTLKKTMFQDANKLGTLQRNISLEKDDVTVNKIITRIDYLNQCLTEDKKELDAMKPKRKTKSSKKVVVPRGKRLSKMTKTGLKKLKTSLIPTSIESGYAITDAERSPQQSPSSTPSVSSSVPNVSNNLKLKLFATSTGTYTTTAPKADVSITTALEEDFSITTAPEEDFSITTAQEEDFSITTAPEEDFSITTALEEDFSITTAPEEDFSITTTPEEDFSITIAPVTTAPQEHLSSYIPRPHVNIVEGVSSSMKLYVEAGKPRVKKSTLEPVEPPKVPPKGISSDHDINLTQLMEWCSKELASTVTSYFNSSLAETPGLEISNSLNVPGNKSPILSLEKKQNLVHKFTSVDKLTYRPTLEEFEDPIKYMQKIQCEASRYGICKIIPPKEFHVPCHLDDNSMFTTINQYLGRLYQRWGPAIREMTGIQVYLTKINPREKDNFMKCPMFDGVELDLVKLHNAVLLHGGIEELLAHRELWVRIAQQLSLVSPRGKPDHKKLEKLYCKHVLPYESMTSDDRDCLFSMIDVLWKERYQNLTRRANRPLHYQKRMLGECESDDEEPPLDPSCKTIRTISKPCFDRIEECTAKGRTMNLTTYRRIASQIYAMRFPPGAKAKPTTEEIEDEYWKILSEGKEHICVLSACIDTSVDKLGHTYHRNGPGGSHPWNLKRLGENPLNVLSFLGKTLSVTEPTMCLNQLYSTNCWHKDPHLLAWMDYMHEGDTKIWYAVSENDSGVFRETMEHLAPFAVQNKGIWLTSDTTMVPPGMLLANGVKLQRIEQNPGEFIVVFPGAYASSIATGHSISESVYFETKEWMYSIDDIFRQMREDHEPGMFSNIVLLFRMARDPMASLDVMPFIHESISKIVDTEINIRKEAAELNFEIIYVNTILSKVKLEGHGNRGPVSWPNQEECSICRAPLILSKTVRYNETRLLVCLKHGIQLYKAAPVEDRGTPPPVTVLYSEEELMDILDFVWRRITEDGNVFEKEGIGLLPLTIHSTKSSATAQLSLKNKDHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-