Basic Information

Insect: Epinotia ramella
Gene Symbol: stc
Assembly: GCA_947578815.1
Location: OX388211.1:19587092-19607758[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 3.5e+04 -4.6 1.6 15 19 627 631 626 631 0.81

2 14 0.063 7.4e+02 1.3 1.5 2 10 659 667 659 667 0.93

3 14 0.00029 3.4 8.7 20.3 4 19 675 690 673 690 0.93

4 14 5.1e-08 0.0006 20.7 12.5 1 18 726 743 726 744 0.97

5 14 3 3.5e+04 -4.3 2.4 7 11 748 752 748 753 0.89

6 14 0.00039 4.6 8.3 9.8 1 18 785 802 785 803 0.98

7 14 2.8e-05 0.32 12.0 11.8 1 19 844 866 844 866 0.87

8 14 0.0078 91 4.2 6.8 1 11 906 916 906 917 0.94

9 14 0.26 3.1e+03 -0.7 0.5 4 10 921 927 920 929 0.92

10 14 4.9e-05 0.58 11.2 15.8 3 18 935 950 923 951 0.87

11 14 0.0019 23 6.1 13.3 8 18 996 1006 990 1007 0.79

12 14 1.9e-07 0.0022 18.9 11.9 1 17 1043 1061 1043 1067 0.83

13 14 0.0012 14 6.7 7.9 1 13 1073 1084 1073 1085 0.97

14 14 1 1.2e+04 -2.6 0.6 5 12 1117 1124 1113 1124 0.67

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	3.5e+04	-4.6	1.6	15	19	627	631	626	631	0.81
2	14	0.063	7.4e+02	1.3	1.5	2	10	659	667	659	667	0.93
3	14	0.00029	3.4	8.7	20.3	4	19	675	690	673	690	0.93
4	14	5.1e-08	0.0006	20.7	12.5	1	18	726	743	726	744	0.97
5	14	3	3.5e+04	-4.3	2.4	7	11	748	752	748	753	0.89
6	14	0.00039	4.6	8.3	9.8	1	18	785	802	785	803	0.98
7	14	2.8e-05	0.32	12.0	11.8	1	19	844	866	844	866	0.87
8	14	0.0078	91	4.2	6.8	1	11	906	916	906	917	0.94
9	14	0.26	3.1e+03	-0.7	0.5	4	10	921	927	920	929	0.92
10	14	4.9e-05	0.58	11.2	15.8	3	18	935	950	923	951	0.87
11	14	0.0019	23	6.1	13.3	8	18	996	1006	990	1007	0.79
12	14	1.9e-07	0.0022	18.9	11.9	1	17	1043	1061	1043	1067	0.83
13	14	0.0012	14	6.7	7.9	1	13	1073	1084	1073	1085	0.97
14	14	1	1.2e+04	-2.6	0.6	5	12	1117	1124	1113	1124	0.67

Sequence Information

Coding Sequence: ATGTCCCAGTGGAACAATTCTTACGCTTACAACGAATATCAGGGCTCCAATACCTGGAATGGTGAAACAGATAACCAATATTCTAACCAACAGCACTACCCAACCGCACAGCCTACTTATGAACCAACCAACCAGTATGTAAATTTCCAAGAGTTTCTATCTCAAATGCAGGGTAGTAGCGCTGGCGCGTCCAATTCTGCCTCATACAATCCTCAGTACGAAAATTATCCTAACAACCATTACGAATATCAAAACATGCCATCAACATCTCAGAATCAAGCTCAAAATTCATACTATCCAACCAATTCTAGTAATGTCAATAGTACAGAATTACAAACCACGCCCACTCCAAAAACAGCACCAGAACCTAGCTGTAGCAACCCAATGGTATTTAAATCTAATCTTACACCAACGGCTACTGAATTTGTGCCAAAAGGAACGTCTCAGAAGCAACCAAGTCCTCCAGAAGACTCTTCCAGCTATAACGGAGTGTCGGAAGCGAAGAGTGACCACACAGCTGATAGGAACTGGAGAGAGAAACAGTCTTCCCAACCAAGCAGTTCCCGTAGCTATAATGAACCAAGGAATGATCCGGAATCAAAGAAAAAAACAGATAAAGACCGTAAGCGAGGTAATAAAGGTCGTGACAATAATGTAAGTAGTCAAAATGAAACTAATAGTCAATACAATGAGCTTAATTATCAAAATGGTGATGGTGGCGAATATGAATCAAATACTTACAGTTATGACTCTAGCAAACATAGTGCAGAGTATAGTAGCCGTAATCAGGAACCCAGTAGCCGGAAATATGAAAATAAGAACAGTCGCAGGAATGAGTCTACCCGTAACAATGAAGGTAGCAGTCGCAACAAAGATTCCACCCGTAACAATGAAGGCAGTCACAACAATAATTCCACCCGTAACAATGAAGGTAGCAGTCGCAACAATGATTCCAATAGTTCCAACAAGAATAATGATTCAGAGCGCAATTATGATTCTCAAGATCGTAACTACTCAAATAGGAACAATGAGTCCGATAATCGACACTACGAATCCAGCAGTCGCAATTACGACTCGAAAAAACGCAACTACAATAATCGTAACTATGACTCTAATAATCGCCATGAAGGCACTCGCAATAACGATTCCACCAGTCGTAATAACGATTCGACCAGTCGTAACTACGATAGTCGCGGTGATTCGGGCCGCAGCTCCGACTACCGTAGAAACGACTTCAACGGCCGCGATAGTGACTACAATAGCCGTAACAATGATTACAATAGTCACAACAATGACTACAACAGTCGCAGCAATGACTACAACAGTCGGAATGACTACAATGATAGTCGTAATGATTATAGTGGTCGTAACCAGGACTATAGAGAATCAAACCGTTACGAAAGCAATAGGGGGGGTAAATCAAAGAGCAAAGATGCTGACAATCGGACTTATTACAATAGTACAGCCAAAAGTAGTCAGGACGTGAGGAGTGGGAGGGCAGAGAGAGAAGGCTCTGGTAGGAGTAGGAACTGGGCAGGAACACAGCGGGTGAGACCAATGGAAAGAGCTGATGATGAGCAGTTTGCTAAAGGCTATTTGGACAATCGGGAGGAACGGTACTCAAAGGGCAGACCGGAATCTATGTTCAGTCCTATGAAAAACAGGAATAAACAAGTGGATTATGCTGGAAACACGGACATGACCCAACGGGAGCGCCTCTCCGAGCAACTAGACAAGGGGACCCTGGAATGCCTGGTGTGCTGCGAGCGAGTGAAGCAGATAGACCCTGTGTGGTCATGCGGCAACTGCTACCATGTGCTGCATCTCCGCTGCATCAGGAAGTGGGCCATGAGCAGCATCATAGAGGGCAAATGGCGATGCCCGGCCTGCCAGAACACGAGCTCCGAAATTCCGACGGAGTACCGCTGCATGTGCGGCGCAGTGCGGAGCCCGGACTACCAACGCGGACAGCATGGGGCCCACACCTGTGGACAGGCATGCCAGCGGGCGCGCCCCTGCCCGCACCCGTGCACGCTGCCGTGCCACCCGGGGCCCTGCCCGCCGTGCCAGGCTACCGTTTCCAAGCAATGCGGCTGCGGCGCCGAGACTCGCTCCATCCTCTGCAGCAGTAAACTGCCGCAATTGTGCGGGCGAGTGTGCTCGCGCAAGCTACAGTGCGGAGTGCACGCGTGCGAGAGAGAGTGCCACGAGGGCGCGTGCGAGCCGTGCGAGGCCTCCGTCGAACAAGTGTGCCACTGCCCGGCGGCCACGGCGCGCTCGGTGCCGTGCACGCTGGCGACCGGCAGCTGCGCGCGCTGGTCGTGCGGCGCGGCGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCGTGCGCCGCGTGCGCGCTGCTGCCGGCCAGCGTGCTGGCGTGCCCGTGCGGCCGGACCCGGATATCCAAAGACGCCCGCAAATCGTGCACGGACCCGATCCCGCTGTGCGGGAACATCTGCGCCAAGCCGCTCCAGTGCGGACCCGCCGGCGACAAGCACTTCTGCAAGCTCGACTGCCATGAAGGCCCATGCCCCGTGTGCCCAGACAAGACCCTGGTGGCGTGTCGCTGCGGGCACTCCAGCCGCGAGATACCCTGCGCGGAGCTGCCTCAGATGTTGGACAACGTGTTCTGTCAGAAGAAGTGCAATAAGAAACTGTCATGCGGGCGCCACCGCTGCCGCGCCTCGTGCTGCGCAGCCACGACGCATCGTTGCGGAGTTGTGTGTGGACGCATGCTCGCGTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACTGGACACTGCGCGCCTTGCGACAGAGCTAGCTTCGAGGAGCTGACGTGCGAGTGCGGCGCCGAGGTCCTTCTTCCGCCAGTCCCGTGCGGCAGCAAGCGGCCCGCGTGCAGCGCCCCGTGCCAGCGCCCACGCGCTTGCGGGCACCCCGCGCTACACGCGTGCCACGAGGGCCCTTGCCCGCCCTGCGTCGTGCTCACTGCCAAGCGGTGCCACGGGCAGCACGAGGAACGGAAAACGATTCCGTGCTCGCAAGAAGAGTTCTCGTGCGGGCTCTCTTGTGGAAAACCATTACCGTGTGGCAAGCACTTCTGTCAAAAAATCTGCCACAAAGGACCCTGCGACGCGGGCAAATGCACCCAACCCTGCAACGAGAAGCGCCCGAGCTGCGGGCACCCGTGCGCCGCGCCGTGCCACTCGGGCGGCGGGGACAAGGGGGACAAAGGGGACAAGTCCCTGTGCCCCAGCAGCGCGCCGTGCCGCAAGCTCGTGCGCGCGCAGTGCCCGTGCGGCCGTCGGACTGCGGAGCGCTCGTGCCATGAGAACGCGCGAGAATTGGCTAAAGTAATGAGTGCGCTGGCCGCCTCAAAGATGCTGGAAGGCGGTTCGGTGGATCTCTCGGAAGTTCAGCGCCCGACCGCAATGCTCAAAACGCTGGAGTGCGACGACGAGTGCCGCGTAGAAGCCCGCACACGGCGCATCGCGCTCGCACTACAGATCCGCAACCCCGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGTGCGCGCGCTCGCCGCCCGCGAGCCCGCCTTCGCCCGCCAGACCAACCCCGACGTGTCCGCCAAGCTGCAGCTGCGCTACAGCGACCACGTGCGCGCGCTCGCCGCCCGCGAGCCCGCCTTCGCCCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGGTACCTAGCTGTAGCAGACCAACCCCGACGTGTCCGCCAAGCAAGCTGCAGCCGCGCTACAGCGACCACGTGCGCGCGCTCGCCGCCCGCGAGCCCGCCTTCGCCCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGACCAACCCCGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGTGCGCGCGCTCGCCGCCCGCGAGCCCGCCTTCGCCCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGTCGAAGCAGAGGACGCGAGCGCACTCGTTCCCGTCGTGCAACTGGCAGAAGCGGCAGTTCATTCACGAGATGTGCGAGCAGTTCGGCTGTGAGAGCGTCGCGTACGACGCGGAGCCGAACCGGAACGTGGTCGCCACTGCGGACAAGGAGAAGTCGTGGCTGCCCGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGACCGGCAAGCGGCGCGTGCCCGGGCCCGTGCTGCGCGCGCCCGCGCCCGCCGCCAGCAGCGCCGCCAACACCAAATCGGCGAGCGGCTGGGCGACGCTAACGTCCACCAATGCGTGGGCGGCGCGCGCGCAGAAAGCCGAACAGCAACAAGCGCGACCCAAGATCGACTACTTCGACAACCCGCCGGACAACTAG
Protein Sequence: MSQWNNSYAYNEYQGSNTWNGETDNQYSNQQHYPTAQPTYEPTNQYVNFQEFLSQMQGSSAGASNSASYNPQYENYPNNHYEYQNMPSTSQNQAQNSYYPTNSSNVNSTELQTTPTPKTAPEPSCSNPMVFKSNLTPTATEFVPKGTSQKQPSPPEDSSSYNGVSEAKSDHTADRNWREKQSSQPSSSRSYNEPRNDPESKKKTDKDRKRGNKGRDNNVSSQNETNSQYNELNYQNGDGGEYESNTYSYDSSKHSAEYSSRNQEPSSRKYENKNSRRNESTRNNEGSSRNKDSTRNNEGSHNNNSTRNNEGSSRNNDSNSSNKNNDSERNYDSQDRNYSNRNNESDNRHYESSSRNYDSKKRNYNNRNYDSNNRHEGTRNNDSTSRNNDSTSRNYDSRGDSGRSSDYRRNDFNGRDSDYNSRNNDYNSHNNDYNSRSNDYNSRNDYNDSRNDYSGRNQDYRESNRYESNRGGKSKSKDADNRTYYNSTAKSSQDVRSGRAEREGSGRSRNWAGTQRVRPMERADDEQFAKGYLDNREERYSKGRPESMFSPMKNRNKQVDYAGNTDMTQRERLSEQLDKGTLECLVCCERVKQIDPVWSCGNCYHVLHLRCIRKWAMSSIIEGKWRCPACQNTSSEIPTEYRCMCGAVRSPDYQRGQHGAHTCGQACQRARPCPHPCTLPCHPGPCPPCQATVSKQCGCGAETRSILCSSKLPQLCGRVCSRKLQCGVHACERECHEGACEPCEASVEQVCHCPAATARSVPCTLATGSCARWSCGAACARVLACGAHVCRAPCHAPPCAACALLPASVLACPCGRTRISKDARKSCTDPIPLCGNICAKPLQCGPAGDKHFCKLDCHEGPCPVCPDKTLVACRCGHSSREIPCAELPQMLDNVFCQKKCNKKLSCGRHRCRASCCAATTHRCGVVCGRMLACQLHRCEQFCHTGHCAPCDRASFEELTCECGAEVLLPPVPCGSKRPACSAPCQRPRACGHPALHACHEGPCPPCVVLTAKRCHGQHEERKTIPCSQEEFSCGLSCGKPLPCGKHFCQKICHKGPCDAGKCTQPCNEKRPSCGHPCAAPCHSGGGDKGDKGDKSLCPSSAPCRKLVRAQCPCGRRTAERSCHENARELAKVMSALAASKMLEGGSVDLSEVQRPTAMLKTLECDDECRVEARTRRIALALQIRNPDVSAKLQPRYSDHVRALAAREPAFARQTNPDVSAKLQLRYSDHVRALAAREPAFARQVHDKLTELVQLAKKVPSCSRPTPTCPPSKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKTNPDVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKSKQRTRAHSFPSCNWQKRQFIHEMCEQFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLARETGKRRVPGPVLRAPAPAASSAANTKSASGWATLTSTNAWAARAQKAEQQQARPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01073266;
90% Identity: iTF_00656822;
80% Identity: -