Eram016763.1
Basic Information
- Insect
- Epinotia ramella
- Gene Symbol
- nfxl1
- Assembly
- GCA_947578815.1
- Location
- OX388220.1:14842814-14845285[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 3 3.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 21 0.097 1.1e+03 0.7 0.4 4 10 169 175 168 175 0.96 3 21 2.2e-07 0.0025 18.7 15.7 3 19 186 202 185 202 0.95 4 21 1.3e-05 0.16 13.0 12.6 3 19 239 255 237 255 0.91 5 21 0.2 2.3e+03 -0.3 0.7 5 10 279 284 279 285 0.89 6 21 6.7e-09 7.9e-05 23.5 12.6 1 19 290 308 290 308 0.99 7 21 1.1e-07 0.0013 19.7 16.4 3 19 345 361 336 361 0.88 8 21 1.1 1.3e+04 -2.7 0.2 1 4 370 373 370 375 0.92 9 21 3 3.5e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 21 8.9e-06 0.1 13.6 18.3 1 18 395 412 395 413 0.97 11 21 2.1e-08 0.00025 21.9 17.3 1 19 422 440 422 440 0.99 12 21 0.0001 1.2 10.2 4.6 10 19 489 498 487 498 0.91 13 21 0.047 5.5e+02 1.7 1.4 6 12 497 503 497 504 0.92 14 21 0.022 2.6e+02 2.7 5.5 3 11 509 517 508 518 0.88 15 21 0.56 6.5e+03 -1.8 3.3 14 18 547 551 547 552 0.85 16 21 0.32 3.7e+03 -1.0 0.4 8 12 568 572 567 579 0.79 17 21 0.0031 36 5.5 6.0 1 11 588 598 582 599 0.91 18 21 1.3 1.5e+04 -2.9 1.5 15 18 613 616 612 617 0.82 19 21 0.00072 8.5 7.4 14.3 1 18 628 645 628 646 0.90 20 21 3 3.5e+04 -5.1 2.4 9 13 652 656 651 656 0.74 21 21 2.1e-05 0.25 12.4 13.1 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- ATGGCCAGGCGATACCACGACGCAGCTGCGAAACTGCAGCAAAATGTTCAAAAACATTTGAAGGGAATGAAAGAGCTATCGTCATCTGAAGATGAGGCGCCGTACGAGTCGAGCGTTCTTGAGGGTGTACTGCAGAGCTACAGAAATGGCGGCGGCGACGCATACATGCTCAATCGCACGAAGAACATGCTGGAAGAAGCCATAAGTGGCCGTCATGTAACCTGCCTCATTTGTATAGGTTCTATCAAGAGAGCTCATCCCATCTGGACCTGTGACCACTGCCACTCCTACTTCCACCTCTCTTGCATCCAGAAGTGGTCAAACGACAGCATTAGCCTCCGGAGCGAGGAGAACCACGGCCCTATTGCAGTGTTTGTGCCCAAGAAAATCGAATGGTGCTGCCCAAAATGCCGACAATCTTACAGCAAAGAGGAAATACCTCGCAAGTATCGGTGCTTCTGTAGCAAGACTGACGACCCTCCGTTCCACCCGTGGTTGATACCACATTCCTGTGGAGAAGTGTGTGAGAAAAGGTTATCAACGGGGGATAATTGCAAGCATAAATGTATGTTGCTGTGCCACCCTGGTCCGTGCCCGCCCTGTCCACAGACCGTCAATGGAGCATGCTTCTGTGACAAGGAACGGAAGCGCGTTCGCTGCAGTGCTGCCAAATGGTCTTGTAACCAGCAGTGCAAAAAATTACTCTCATGCAAATCCCACAAATGTGAAAATGTTTGCCATCAGGATGCCTGCCCTCCTTGCACCTATACTAGTATCCAGGCGTGTTTGTGTGGAGCAGAGAAGGTCAAACGACCTTGCAATGATCCTCTATGGCGATGCCAGAAGCCTTGCTACAAACCATTTTCGTGTGGCTATCATAATTGTGAAGAAATATGTCATTCCGGTGAATGTGGTGACTGTCCGAACTCAGGCATGCGGTCATGCCCTTGTGGAGCTAATCAGCGCTTTGTCCAGTGCCCGGATGTCATGGAGACCTGTGCGGGGACCTGTGGGAAGACCCAGGACTACTGTGATCATACTTGTCCAGAGAAATGCCATAAAGGGCCCTGTCCTCCATGTCAAGTGCTGATAGAAAAGAAGTGTCAATGCGGCTCACATGCAAGATCATTACCCTGCAGTAAAGAGTTTAAATGTGAAACAAAGTGCCGAGGTGTAAGACTTTGTGGGAAACATGGCTGTGCACGAAAGTGCTGCAATGGAAACTGTCCTCCGTGTGAGAAAATCTGTGATAAGCCACTTCAGTGTGGTCGCCACAAATGCACAACAGTCTGCCATCACGGCCCATGCTACCCTTGCCCTAGAGAATCCAAAGTAACTTGCCGCTGTAAAGAGACCTATGTAACTGTGCCATGCGGTAGAGAGAAGCATACTAAACCACCTAAATGCAGCCTCCTCTGCAAGCTTAAATATAAATGTGGACATGTAGAAGAAAACAGGCATTCCTGTCATTTTGGTGATTGCCCACCCTGTAAAGCAATATGCCATAAGCAGTATGAGAAATGTGAGCATGACTGCAAAGCCGTTTGCCATGCATATGTAAATGTGGTTTTTAAACAGGTTGAGAAACCTGCTACGCCCTGGGAGGTGCAGCCACCAAAAACCAAAGTCATGACTCTTGAATGTCCACCGTGTGAGATTCCAGTCCCTATTGTCTGCTTTGGGGACCATGAGACGGCAGATCAGCCGTGTCACTCGGCGTCCCGACGCCCCTGCGGTCGCGAGTGTGGCCGGGTGCTCCCCTGCACCAAACACAAGTGCAAACTGCTCTGTCATTTACACACACCTGATGCTATTTTCCCAAATGTTCCATCGTCATGCGAGCCATGTAATAGAGAATGCCTAGTACCGAGACCAGAGAAATGTAGCCATAAGTGTGCTAAAGGCGTTTGCCACCCTGGCACCTGCCCATCCTGTGAAGTCATGGAAAGAGTACCATGCCACTGCGGAGTAACTGAGTTGTACTTACGATGCCGTGAACTCAGTGCTGCTACAGAGGAAATGCTGTCGTGCAAGCAGCAGTGCCCTAAGAATTTGGAGTGCGGACATAGATGCCGGAACCTGTGCCATCCGGGCACCTGTGGGGAGCAGGTCTGCACCAAGAAAACAAAGGTTAGCTGTCCGTGTGGTAACTTAAAGAAAGACGCTCCATGCAACCTTGTCAGGAATGGAGAAGGCAAACCTCCTTGTGATTCTACTTGTGAAGAAAAACGTAAAGCAAATCAGTTAGAACGAGAGAAAGAAGAGAAGAGACGCAAAGAGATTGAAGAGGAGAGAAACCGCAAGGAGCTAGCCGAATATGAATGGAAGTTGAGTGGAAAGAAGAAGAAATATAAGGAGAAGAAGGTTGTGACTAATAGAGATGATCGGAATCTGCTGCAAAAATATTGGATTCCATTGATTTCAGTCTTGGTGGTGGTAACGGCGGCTATTTATTTCATATTTTGTGTTTAA
- Protein Sequence
- MARRYHDAAAKLQQNVQKHLKGMKELSSSEDEAPYESSVLEGVLQSYRNGGGDAYMLNRTKNMLEEAISGRHVTCLICIGSIKRAHPIWTCDHCHSYFHLSCIQKWSNDSISLRSEENHGPIAVFVPKKIEWCCPKCRQSYSKEEIPRKYRCFCSKTDDPPFHPWLIPHSCGEVCEKRLSTGDNCKHKCMLLCHPGPCPPCPQTVNGACFCDKERKRVRCSAAKWSCNQQCKKLLSCKSHKCENVCHQDACPPCTYTSIQACLCGAEKVKRPCNDPLWRCQKPCYKPFSCGYHNCEEICHSGECGDCPNSGMRSCPCGANQRFVQCPDVMETCAGTCGKTQDYCDHTCPEKCHKGPCPPCQVLIEKKCQCGSHARSLPCSKEFKCETKCRGVRLCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTTVCHHGPCYPCPRESKVTCRCKETYVTVPCGREKHTKPPKCSLLCKLKYKCGHVEENRHSCHFGDCPPCKAICHKQYEKCEHDCKAVCHAYVNVVFKQVEKPATPWEVQPPKTKVMTLECPPCEIPVPIVCFGDHETADQPCHSASRRPCGRECGRVLPCTKHKCKLLCHLHTPDAIFPNVPSSCEPCNRECLVPRPEKCSHKCAKGVCHPGTCPSCEVMERVPCHCGVTELYLRCRELSAATEEMLSCKQQCPKNLECGHRCRNLCHPGTCGEQVCTKKTKVSCPCGNLKKDAPCNLVRNGEGKPPCDSTCEEKRKANQLEREKEEKRRKEIEEERNRKELAEYEWKLSGKKKKYKEKKVVTNRDDRNLLQKYWIPLISVLVVVTAAIYFIFCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023391;
- 90% Identity
- iTF_00411076;
- 80% Identity
- -