Eram029041.3
Basic Information
- Insect
- Epinotia ramella
- Gene Symbol
- ZFY
- Assembly
- GCA_947578815.1
- Location
- OX388225.1:13333229-13361351[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.00089 0.072 14.5 2.0 1 23 187 209 187 209 0.98 2 26 1.6 1.3e+02 4.3 3.8 2 23 214 235 214 235 0.96 3 26 0.11 9.1 7.9 1.5 2 23 240 262 239 262 0.95 4 26 0.029 2.3 9.8 1.4 1 23 265 287 265 287 0.97 5 26 1.8e-05 0.0015 19.8 1.9 1 23 290 313 290 313 0.98 6 26 0.017 1.4 10.5 0.7 2 22 322 342 321 346 0.92 7 26 0.0025 0.2 13.1 1.9 1 23 359 382 359 382 0.97 8 26 5 4e+02 2.7 0.2 1 10 388 397 388 400 0.87 9 26 0.00022 0.017 16.4 1.3 1 23 442 465 442 465 0.97 10 26 5 4e+02 2.7 0.2 1 10 471 480 471 483 0.87 11 26 0.00022 0.017 16.4 1.3 1 23 525 548 525 548 0.97 12 26 0.23 19 6.9 5.4 3 23 559 580 554 580 0.91 13 26 5 4e+02 2.7 0.2 1 10 586 595 586 598 0.87 14 26 0.00022 0.017 16.4 1.3 1 23 640 663 640 663 0.97 15 26 5 4e+02 2.7 0.2 1 10 669 678 669 681 0.87 16 26 0.0025 0.2 13.1 1.9 1 23 723 746 723 746 0.97 17 26 5 4e+02 2.7 0.2 1 10 752 761 752 764 0.87 18 26 0.0025 0.2 13.1 1.9 1 23 806 829 806 829 0.97 19 26 0.23 19 6.9 5.4 3 23 840 861 835 861 0.91 20 26 5 4e+02 2.7 0.2 1 10 867 876 867 879 0.87 21 26 0.0025 0.2 13.1 1.9 1 23 921 944 921 944 0.97 22 26 8.4 6.8e+02 2.0 0.2 1 9 950 958 950 961 0.89 23 26 0.00022 0.017 16.4 1.3 1 23 1004 1027 1004 1027 0.97 24 26 6.6 5.3e+02 2.3 6.0 1 23 1033 1056 1033 1056 0.92 25 26 0.00013 0.011 17.1 0.2 3 23 1067 1087 1066 1087 0.99 26 26 0.00084 0.068 14.6 1.1 1 23 1093 1116 1093 1116 0.95
Sequence Information
- Coding Sequence
- ATGTTCACAAAGAAAGTAGTAGAAGCTCAGAGAATACTTCAGTATTATTACACTAACAAACAGGATCCATTCCCCAACTCCCTATCAAACCTCTCCACCCGCACCACTGACAACCAAATACATATCACACACGAAGAAACCGAAATAAAAGAAATCAAACAAGAAATAGACATCAACGAAGATAACCATTTCGACACCAACATCAAAGACGAGGAACCTATTGACGAAGAACCGTTACCGAAGAATCCCAAGATTGATACTGTGGTAACTGCTCCGGAGCCATCCAAGTCGGATTGGATGGAATATAACATGAAAAGAATACTAAACAGGAAAGCGAAGTATAGATTTGTGAATACTAAGCTTAAGAAACACAGACTGTTGCTGATAAGGAAGATTCCAATGGAGATAAGTGAAGTGATGTCCGGTCTGGAAGAGGAGAGGAACGGTGGTTTCTTTTTAAGGGAGGAGTTTAAGTGTGTGAGCTGTGTGGCTCTGTGGAGCGATGCGGATGGCCTGGTGAAGCATAAGGAGAAGTGCCATGATGAGACTATTGGCCCCTACAACTGCGACATATGCAACACTCGCTGCCCATCCAACGACAAGCTACAATCTCATCAGGCTAAGCACCGCTTCCAGCGGGAGTGCAAAGTGTGCCGGCTGCAGTGTTACTCGCAAAGTGTGATGAAGAGACATCTGACGAAGCATGATCACATGGTGCAGTGTCTCGCGTGCGGACTGTGTTTCACAAATGTGCGTCTGTTCTACAATCACTACAAGTCGCTGCACGTCAGTTTTGTGTGTGACGTGTGCGGCAAGCGGTGCAAGGCGCGTTCCATTATTGAAAGACACCTCAGATATCACTTCGGCTACGAATGCCCTTACTGCAAGAAGAAACTAAAGAACTCCTCGTCATACAAGAACCACATAGAAACACAGCACTCATCTTCCGTCTCGGACAACTCGTACTGCGTGCAGTGCGACAGAAGATTCACGAGCGACCGCATGTACAAGCGGCACTTGCAGTCGAGCGCGGCTCATGCGCGGGAGCGGGACAACACTAGGACGAAGCGCAAGTACCCGTGTCCCGAGTGCAGCAACGTGTACTCACGACGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGGTGAGTACACTGCGAGTACCCGTGTCCCGAGTGCAGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGTACACTGCGAGTACCCGTGTCCCGAGTGCGGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGGTGAGTACACTGCGAGTACCCGTGTCCCGAGTGCGGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGTACACTGCGAGTACCCGTGTCCCGAGTGCGGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGTGCGGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGGTGAGTACACTGCGAGTACCCGTGTCCCGAGTGCAGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGTACACTGCGAGTACCCGTGTCCCGAGTGCGGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGGTGAGTACACTGCGAGTACCCGTGTCCCGAGTGCGGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGTACACTGCGAGTACCCGTGTCCCGAGTGCAGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGGTGAGTACACTGCGAGTACCCGTGTCCCGAGTGCAGCAACGTGTACTCGCGGCGCACGTAAATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCTAGTATCACTGCGAGGACTGCGACCGGTACACTGCGAGTACCCGTGTCCCGAGTGCAGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGTGCGGCAACGTGTACTCACGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGGTGAGTACACTGCGAGTACCCGTGTCCCGAGAGCAGCAACGTGTAATCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGTACACTGCGAGTACCCGTGTCCCGAGTGCAGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGGTGAGGACACTGCGAGTACCCGTGTCCCGAGTGCAGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGTACACTGCGAGTACCCGTGTCCCGAGTGCGGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTGCACAGCAAGCAGAGCAAGTATCACTGCGAGGACTGCGACCGGCACTTCCTGAACCGCACGCGGTACCTCGACCACCGGCGGTTCCAGCATGAGGGCGCCAAGAGAGACAAGGACAAACTGTGCAACATATGCGGACGAGGCTTCGCGGCAAACAGAACGCTAGTGAACCACATTCGAACGCACTCGGGAGAGCGCCCGTTCGCGTGCGAGTACTGCGGCGCCAAGTTCACGCAGAAACACGCCATGCTGTCGCACGTCAAGTACATACACTTGAAGAGCAAGCGCTCTAGCTGTCACGAGTAA
- Protein Sequence
- MFTKKVVEAQRILQYYYTNKQDPFPNSLSNLSTRTTDNQIHITHEETEIKEIKQEIDINEDNHFDTNIKDEEPIDEEPLPKNPKIDTVVTAPEPSKSDWMEYNMKRILNRKAKYRFVNTKLKKHRLLLIRKIPMEISEVMSGLEEERNGGFFLREEFKCVSCVALWSDADGLVKHKEKCHDETIGPYNCDICNTRCPSNDKLQSHQAKHRFQRECKVCRLQCYSQSVMKRHLTKHDHMVQCLACGLCFTNVRLFYNHYKSLHVSFVCDVCGKRCKARSIIERHLRYHFGYECPYCKKKLKNSSSYKNHIETQHSSSVSDNSYCVQCDRRFTSDRMYKRHLQSSAAHARERDNTRTKRKYPCPECSNVYSRRTYMNNHYRHVHSKQSKYHCEDCDRVSTLRVPVSRVQQRVLAAHVHEQPLPPRAQQAEQVSLRGLRPVHCEYPCPECGNVYSRRTYMNNHYRHVHSKQSKYHCEDCDRVSTLRVPVSRVRQRVLAAHVHEQPLPPRAQQAEQVSLRGLRPVHCEYPCPECGNVYSRRTYMNNHYRHVHSKQSKYHCEDCDRCGNVYSRRTYMNNHYRHVHSKQSKYHCEDCDRVSTLRVPVSRVQQRVLAAHVHEQPLPPRAQQAEQVSLRGLRPVHCEYPCPECGNVYSRRTYMNNHYRHVHSKQSKYHCEDCDRVSTLRVPVSRVRQRVLAAHVHEQPLPPRAQQAEQVSLRGLRPVHCEYPCPECSNVYSRRTYMNNHYRHVHSKQSKYHCEDCDRVSTLRVPVSRVQQRVLAAHVNEQPLPPRAQQAELVSLRGLRPVHCEYPCPECSNVYSRRTYMNNHYRHVHSKQSKYHCEDCDRCGNVYSRRTYMNNHYRHVHSKQSKYHCEDCDRVSTLRVPVSREQQRVIAAHVHEQPLPPRAQQAEQVSLRGLRPVHCEYPCPECSNVYSRRTYMNNHYRHVHSKQSKYHCEDCDRVRTLRVPVSRVQQRVLAAHVHEQPLPPRAQQAEQVSLRGLRPVHCEYPCPECGNVYSRRTYMNNHYRHVHSKQSKYHCEDCDRHFLNRTRYLDHRRFQHEGAKRDKDKLCNICGRGFAANRTLVNHIRTHSGERPFACEYCGAKFTQKHAMLSHVKYIHLKSKRSSCHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -