Basic Information

Insect: Epinotia ramella
Gene Symbol: ZNF711_1
Assembly: GCA_947578815.1
Location: OX388223.1:12791912-12819835[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00097 0.079 14.4 4.1 1 23 168 190 168 190 0.99

2 13 0.011 0.91 11.0 1.2 1 23 197 219 197 219 0.98

3 13 0.15 12 7.5 0.3 1 23 223 246 223 246 0.88

4 13 0.19 15 7.2 1.0 1 12 253 264 253 264 0.92

5 13 0.15 12 7.5 0.3 1 23 265 288 265 288 0.88

6 13 0.00024 0.019 16.3 3.6 1 23 295 318 295 318 0.93

7 13 6.1e-05 0.0049 18.2 0.1 2 23 324 346 323 346 0.94

8 13 8.1e-06 0.00066 20.9 0.5 1 23 359 381 359 381 0.96

9 13 0.00013 0.011 17.1 1.5 1 22 387 408 387 412 0.94

10 13 7.4e-05 0.006 17.9 1.0 2 23 421 443 420 443 0.95

11 13 0.0001 0.0083 17.4 0.5 1 23 449 472 449 472 0.97

12 13 4.1e-06 0.00034 21.8 0.3 1 23 481 503 481 503 0.99

13 13 0.062 5 8.7 0.1 1 23 509 532 509 532 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00097	0.079	14.4	4.1	1	23	168	190	168	190	0.99
2	13	0.011	0.91	11.0	1.2	1	23	197	219	197	219	0.98
3	13	0.15	12	7.5	0.3	1	23	223	246	223	246	0.88
4	13	0.19	15	7.2	1.0	1	12	253	264	253	264	0.92
5	13	0.15	12	7.5	0.3	1	23	265	288	265	288	0.88
6	13	0.00024	0.019	16.3	3.6	1	23	295	318	295	318	0.93
7	13	6.1e-05	0.0049	18.2	0.1	2	23	324	346	323	346	0.94
8	13	8.1e-06	0.00066	20.9	0.5	1	23	359	381	359	381	0.96
9	13	0.00013	0.011	17.1	1.5	1	22	387	408	387	412	0.94
10	13	7.4e-05	0.006	17.9	1.0	2	23	421	443	420	443	0.95
11	13	0.0001	0.0083	17.4	0.5	1	23	449	472	449	472	0.97
12	13	4.1e-06	0.00034	21.8	0.3	1	23	481	503	481	503	0.99
13	13	0.062	5	8.7	0.1	1	23	509	532	509	532	0.92

Sequence Information

Coding Sequence: ATGATCGTAACAATGATAGAAGACGCCACTCTTAACGCAGCCCGCATACTGTCTCGGCCGCCTCACCAGCTCTCCCGGAAATCTCTGGACGCCATCGAGCTGGGGGCCGACTCCAACCCGGACTACTTGGATGTACAACAGAAAGAACTCAAGCCGACGAGAGAGCTGCCGGTCAAGCAGGAGATGAAGGAAGAGGGAGGGAGGGACGATTATGATGATGATCATATCGACAATGATTTCCAAGAACCCTGTGTTAAAGAAGAAGACTTCTCTCTAAATGCCTTGTTAAAGGAAGATTATGAGATGGTGGAAGTGGACCTAAAGAGTTTCAAGAAAACCCTTAAGAAGGGGAAGTGCAAGAAGAGGAAACTTAAGAATGATGGAGAAATTAAAAGAGAAGATGAAGATATACGCGAAATAGAGTCTGTGCATATAACTCGGGAGCAATGTCTAGAAGAGCGAGCCCGCATGGCGCGCGACCAGCGCTACCTAGCCTCCGCATACAAGTGCCAGCACTGCGTCAAAGGGTTCAACTACAAGGAGAGCTTTGACACGCATATGGAGAAACATAACGAGAGCAACGGTGACTACGAATGTGATATCTGCAAACAGAGAATGAGAACAGAAGAGAAGTTAATCAGCCACAAGAGATATCACGAAGTACGGTATCGCTGTCCCGTATGCGGCCTGACCCGGGTCAGCCGGCTGACTGTCAAGGACCACTACTCGGCTTTCCACACGGCCAACCACTACGGACACAGCTGCCCGCACTGCGCTAAGAGTTTCAAACGGTATCGCTGCCCCGTATGCGGCCTGACCCGGGTCAGCCGGCTGACTGTCAAGGACCACTACTCGGCTTTCCACACGGCCAACCACTACGGACACAGCTGCCCGCACTGCGCTAAGAGTTTCAAACGTAAAGTGTCGTGGCGGAAGCACGTGTCGAACGTGCACACACGCAAGCGGGTGACGTGTGCGTACTGCGACAAGACGTACGCCAACAAGGACGTGCTCAAAGCGCATATGGTCGTCCGACATCCAAAAGAAGTGTCAGCCGGCGAAGTGAAAAAGTCCCACGTCTGTTCAGACTGTGGTAAAGCGTTCAAAGCCCCCTCGCAGCTCAAGATACACAGCATCAAGCATTCCATCAACAGGGACTATTACTGTGTTGAGTGTGACAAGAGTTTCAAATCTGCGTCAATACTGAAGCACCACTTGAAAACGGCGTCCACTCACGTTAGCTACATTGAATTACCACTGCCCTGTGAGCACTGCGACAAACGGTTCGCGATTCGGCGCGACCTCGAGCGGCACACAAATCGGGTTCATCTCAACATCAAACCGTTCCAGTGCGATCGGTGTGAGAAGGCTTATGTGAACTCGTGGTCGTTGAACGAGCACCGCAGACTGACCCACGAGGGCTTCAAGCGCCCGCTCAAGTACCCCTGTACCATGTGCGACAAGGTCTTCGACCGCAACCAAGTCCTCAAAGGCCATATTCGGACTCACACCGGAGAAAGACCCTACCAATGTAGCCGCTGTCCAGCTCAGTTCAGCCAGGCCAGCATCTTGGGCACCCACGTCAAGCTGATACACCTTAAACTGACCAGGGATGGTCGCCCAAAGGCATTGGCTTCCAAATGA
Protein Sequence: MIVTMIEDATLNAARILSRPPHQLSRKSLDAIELGADSNPDYLDVQQKELKPTRELPVKQEMKEEGGRDDYDDDHIDNDFQEPCVKEEDFSLNALLKEDYEMVEVDLKSFKKTLKKGKCKKRKLKNDGEIKREDEDIREIESVHITREQCLEERARMARDQRYLASAYKCQHCVKGFNYKESFDTHMEKHNESNGDYECDICKQRMRTEEKLISHKRYHEVRYRCPVCGLTRVSRLTVKDHYSAFHTANHYGHSCPHCAKSFKRYRCPVCGLTRVSRLTVKDHYSAFHTANHYGHSCPHCAKSFKRKVSWRKHVSNVHTRKRVTCAYCDKTYANKDVLKAHMVVRHPKEVSAGEVKKSHVCSDCGKAFKAPSQLKIHSIKHSINRDYYCVECDKSFKSASILKHHLKTASTHVSYIELPLPCEHCDKRFAIRRDLERHTNRVHLNIKPFQCDRCEKAYVNSWSLNEHRRLTHEGFKRPLKYPCTMCDKVFDRNQVLKGHIRTHTGERPYQCSRCPAQFSQASILGTHVKLIHLKLTRDGRPKALASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00659652;
90% Identity: iTF_00656387;
80% Identity: -