Eram031853.1
Basic Information
- Insect
- Epinotia ramella
- Gene Symbol
- -
- Assembly
- GCA_947578815.1
- Location
- OX388202.1:4951153-4952608[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-09 9e-06 26.2 0.0 1 40 8 47 8 53 0.88
Sequence Information
- Coding Sequence
- ATGGGCATACGAGCGAGATGGACCGACGAGGACATGAAATTAGCCATGGCTGCTGTAAAAAGCGGTGAAATGAGAGTGTACACGGCATCTCTGCACTTCAACATACCTAGGCGGACGTTGGACTACTATCTGAAAAATAACAGGGAACAAAAATCAAAGCTGGGAAGAAAACCTTCCTTATCACACATTAGAATAATACGACTGGCATCCGGCAAGCACTTGACGATGGTGGACGGGTTCACATTCCACCGGAACGGAGCCAAGAGAGTAGGTGGGATCAGGTGGTTCTGCTCTCGAAGGAAAAAAGGATGCCCTGTCTACATCGTGCTGGATGAGATTCATGGGGAACTGGTCAAGTTCCTAGGAGAGCATAACCATGAACCACCGAATTATGTTCAAGCGGGGCAATTTTTTGTTAAAGTTTGA
- Protein Sequence
- MGIRARWTDEDMKLAMAAVKSGEMRVYTASLHFNIPRRTLDYYLKNNREQKSKLGRKPSLSHIRIIRLASGKHLTMVDGFTFHRNGAKRVGGIRWFCSRRKKGCPVYIVLDEIHGELVKFLGEHNHEPPNYVQAGQFFVKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00654212; iTF_01072428;
- 90% Identity
- -
- 80% Identity
- -