Basic Information

Insect: Epinotia nisella
Gene Symbol: stc
Assembly: GCA_932294385.1
Location: CAKOAM010000026.1:3181269-3205502[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.024 6e+02 1.1 1.5 2 10 647 655 647 655 0.93

2 13 0.00011 2.8 8.5 20.3 4 19 663 678 661 678 0.93

3 13 1.4e-06 0.035 14.6 12.9 1 18 714 731 714 732 0.97

4 13 0.00015 3.8 8.1 9.8 1 18 773 790 773 791 0.98

5 13 1.1e-05 0.27 11.8 11.8 1 19 832 854 832 854 0.87

6 13 0.0034 86 3.8 7.3 1 12 894 905 894 905 0.94

7 13 0.099 2.5e+03 -0.9 0.4 4 10 909 915 908 916 0.92

8 13 5e-06 0.13 12.8 13.9 3 18 923 938 915 939 0.87

9 13 0.00074 19 5.9 13.3 8 18 984 994 978 995 0.79

10 13 0.00074 19 5.9 13.3 8 18 1362 1372 1356 1373 0.79

11 13 1.2e-07 0.003 18.0 12.0 1 17 1409 1427 1409 1433 0.83

12 13 0.00047 12 6.5 7.9 1 13 1439 1450 1439 1451 0.97

13 13 0.4 9.9e+03 -2.8 0.6 5 12 1486 1493 1482 1493 0.67

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.024	6e+02	1.1	1.5	2	10	647	655	647	655	0.93
2	13	0.00011	2.8	8.5	20.3	4	19	663	678	661	678	0.93
3	13	1.4e-06	0.035	14.6	12.9	1	18	714	731	714	732	0.97
4	13	0.00015	3.8	8.1	9.8	1	18	773	790	773	791	0.98
5	13	1.1e-05	0.27	11.8	11.8	1	19	832	854	832	854	0.87
6	13	0.0034	86	3.8	7.3	1	12	894	905	894	905	0.94
7	13	0.099	2.5e+03	-0.9	0.4	4	10	909	915	908	916	0.92
8	13	5e-06	0.13	12.8	13.9	3	18	923	938	915	939	0.87
9	13	0.00074	19	5.9	13.3	8	18	984	994	978	995	0.79
10	13	0.00074	19	5.9	13.3	8	18	1362	1372	1356	1373	0.79
11	13	1.2e-07	0.003	18.0	12.0	1	17	1409	1427	1409	1433	0.83
12	13	0.00047	12	6.5	7.9	1	13	1439	1450	1439	1451	0.97
13	13	0.4	9.9e+03	-2.8	0.6	5	12	1486	1493	1482	1493	0.67

Sequence Information

Coding Sequence: ATGTCCCAGTGGAACAATTCTTACGCCTACAACCAATACCAAGGCTCCAATACCTGGAACGGTGAAGCAGATAACCAATATTCTAACCAACAGAACTACCCCACCGCACAGCCTAGTTATGAACCAACCAACCAGTATGTAAATTTTCAAGAGTTTCTATCTCAAATGCAAGACAGTAGCGCTGGCGCGTCCAATTCTGCCTCATATAATCCTCAGTACCAAAATTATCCTAACAACCATTACGAATATCAAAACATGCCATCAACATCTCAGAATCAAGCTCAAAATTCATACTATCCAACAAATTCAAGTAGTATCAGTGGTACAGAATTCCAAACCACGCCCACTTCAAATACAGCACCAGAACCTAGCTGTAACAACCCAATGGTATTTAAATCTAATCTTACACCAACGGCTACTGAATTTGTGCCAAAGGGGACATCTCAGAAGCAACCAAGTCCTCCAGAAGACTCTTCCAGCTATAATGGAGTGTCGGAAGCCAAGAGTGACCATATAGCTGATAGGAACTGGAGAGAGAAACCATCTTCCCAACCAAGCAGTTCCCGTAGCTATAATGAACCAAGGAATGATCCAGAATCAAAGAAAAAACCAGATAAAGACCGTAAGAGAAGTAATAAAGGTCGTAACAATAATGTAAGTAGTCAAAATGAAACAAATAGTCAATACAATGAGCTTAATAGTCAAAATGGGGATGGTGGCGAATATGAATCAAATACTTACAGTTACGAGTCCAGCAGACATAGTGCAGAGTATAGTAGTCGTAATCATGAAGCTAGTAGTCAAAAATATGAAAATAAGAACAGTCGCCGGAATGAGTCTACCCGTAACTATGAGGGTAGCAGTCGCAACAATGATTCCAATAGTTACAAAGACGAATCAAGCAGTCGGAACAATGAATCAGAGCGTAATTATGATTCTCAAGATCGTAACTACTCAAATAGGAACAATGAGTCAGATAACCGACACTACGACTCCAGCAGTCGCAATTACGACTCGAAAAAACGCAACTCCAATAATCGTAACTACGACTCTAATAATCGCCATGAAGGCAGTCGCAATAATGATTCCACAAGTCGTAACTCCGATATTCGCGGTGATTCAGGCCGTACCTCCGACTACCGTAGAAACGACTTCAACGGCCGTGACAGTGACTACAATAGTCGTAACAATGATTACAATAGTCACAACAATGACTACAATAGTCGCAGCAATGACTACAATAGTCGCAGCAATGACTATAATAGTCGCAGCAATGACAACAACAGTCGGAATGACTACAATGATAGTCGTAATGATTATAATGGTCGTAACCAGGACTATAGAGAATCAAACCGTTATGACAGCAATAGAGGAAGTAAATCTAAGAGTAAAGATGCGGACAATCGGACATTTTACAATAATACAGCCAAGAGTAGTCAGGACGTGAGGAGTGTGAGGGCAGAGAGAGGAGAAGGCCCTGGTAGAAGTAGGAACTGGGCTGGAAGTCAGCGGGTGAGACCCATGGAAAGAACTGTTGATGAGCAGTTTGCTAAAGGCTATTTGGACAATCGGGAGGATCGGTATTCAAAGGGAAGACCGGAATCTATGTTCAGTCCTATGAGGAACAGGAATAAACAAGCAGATAATGCGGGAAACACAGACATGACCCAACGGGAGCGTCTCACCGAACAGCTAGACAAAGGGACCCTGGAATGTCTAGTCTGCTGCGAGCGAGTGAAGCAGATAGACCAAGTGTGGTCCTGTGGCAACTGCTACCATGTGCTACATCTCCGCTGCATCAGGAAGTGGGCCATGAGCAGCATCATAGGGGGCAAATGGCGGTGCCCGGCCTGCCAGAACACTAGCTCCGACATTCCGACGGAGTACCGCTGCATGTGCGGCGCCGTGCGGAGCCCTGACTACCAACGCGGACAACACGGAGCGCACACCTGTGGACAGGCGTGCCAGCGGGCGCGCCCCTGCCCGCACCCGTGCACGCTGCCGTGCCACCCCGGGCCCTGCCCGCCCTGCCAGGCCACGGTTTCCAAACAATGCGGCTGCGGCGCCGAGACTCGCTCCATCCTCTGCAGCAGTAAACTGCCGCAAGTGTGCGGGCGAGTGTGCTCGCGCAAGCTGGAGTGCGGGGTGCACGCGTGCGCGGGCGAGTGCCACGAGGGCGCGTGCGAGCCGTGCGAGGCCTCCGTCGAACAAGTGTGCTACTGCCCGGCGGGCACGGCGCGCTCGGTGCCGTGCACGCTGGCGACGGGCAGCTCCGCGCACTGGTCGTGCGGCGCGGCGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCGTGCGCCGCCTGCGCGCTGCAGCCCGCCGCCGTGCTGGCGTGCCCGTGCGGCCGCACGCGGATACCCAAAGACGCCCGCAAATCGTGCACGGACCCGATTCCGCTGTGCGGGAACATCTGCGCCAAGCCGCTCCAGTGTGGACCCGCCGGCGACAAGCACTTCTGCAAGCTGGACTGCCATGAAGGTCCATGCCCCGTGTGCCCAGACAAGACCCTGGTGGCGTGTCGCTGCGGGCACTCCAGCCGCGATATTCTCTGCGCGGAACTGCCGCAGATGTTGGACAACGTGTTATGTCAGAAGAAGTGCAATAAGAAACTGTCATGCGGGCGCCACCGCTGCCGCGCCTCGTGCTGCTCAGCCGCGACGCATCGCTGCGGAGTGGTGTGTGGCCGCATGCTCGCGTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGACACTGCGCGCCCTGCGACCGAGCCAGCTTCGAGGAGCTGACGTGCGAGTGCGGCGCCGAGGTCCTTCTCCCGCCAGTCCCGTGCGGCAGCAAGCGGCCCGCATGCAGCGCCCCATGTCGGCGCCCGCGCGCCTGCGGGCACCCCGCGCTGCACGCGTGCCACGAGGGCCCTTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGGTGCCACGGGCAGCACGAGCAAGCGGCCCGCCTGCAGCGCCCCGTGCCGGCGCCCGCGCGCCTGCGGGCACCCCGCGCTGCACGCGTGCCACGAGGGCCCTTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGGTGCCACGGGCAGCACGAGGTGTGTACATCATCATTGTCCTAGCCCCCGGTCCCGTGCAGCAAGCGGCCCGCCTGCAGCGCCCCGTGCCGGCGCCCGCGCGCCTGCGGGCACCCCGCGCTGCACGCGTGCCACGAGGGCCCTTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGGTGCCACGGGCAGCACGAGGTGTGTACATCATCATTGTCCTAGCCCCCGGTCCCGTGCAGCAAGCGGCCCGCCTGCAGCGCCCCGTGCCGGCGCCCGCGCGCCTGCGGGCACCCCGCGCTGCACGCGTGCCACGAGGGCCCTTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGGTGCCACGGGCAGCACGAGGTGTGTACATCATCATTGTCCTAGCCCCCGGTCCCGTGCAGCAAGCGGCCCGCCTGCAGCGCCCCGTGCCGGCGCCCGCGCGCCTGCGGGCACCCCGCGCTGCACGCGTGCCACGAGGGCCCTTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGGTGCCACGGGCAGCACGAGGTGTGTACATCATCATTGTCCTAGCCCCCGGTCCCGTGCAGCAAGCGGCCCGCCTGCAGCGCCCCGTGCCGGCGCCCGCGCGCCTGCGGGCACCCCGCGCTGCACGCGTGCCACGAGGGCCCTTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGGTGCCACGGGCAGCACGAGGTGTGTACATCATCATTGTCCTAGCCCCCGGTCCCGTGCAGCAAGCGGCCCGCCTGCAGCGCCCCGTGCCGGCGCCCGCGTGCCTGCGGGCACCCCGCGCTGCACGCGTGCCACGAGGGCCCTTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGCCCCCGGTCCCGTGCAGCAAGCGGCCCGCCTGCAGCGCCCCGTGCCGGCGCCCGCGTGCCTGCGGGCACCCCGCGCTGCACGCGTGCCACGAGGGCCCTTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGGTGCCACGGGCAGCACGAGGAAAGGAAAACGATCCCGTGCTCGCAAGAAGAGTTCTCGTGCGGACTACCTTGTGGAAAACCGCTGCCGTGTGGCAAGCACTCCTGTCAGAAAATATGCCACAAAGGACTCTGCGACGCTGGCAAATGCACCCAACCCTGCAACGAGAAGCGCCCGAGCTGCGGGCACCCGTGCGCCGCGCCGTGCCACTCGGGCGGCGGGGACAAGGGGGACAAAGGGGACAAGGGGGACAAGTCCGTGTGTCCCAGCAGCGCGCCGTGCCGCAAGCTCGTGCGCGCGCAGTGCCCGTGCGGCCGCCGGACTGCGGAGCGCTCGTGCCATGAGAACGCCAGAGACTTGGCCAAAATAATGAGCGCGTTGGCCGCATCTAAGATGCAGGAAGGCGGTTCGGTGGACCTCTCGGAAGTACAGCGCCCCACCGCAATGCTCAAAACGCTGGAGTGCGACGACGAGTGCCGCGTAGAAGCCCGCACGCGGCGCCTCGCGCTCGCACTACAGATCCGCAACCCCGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGTGCGCGCGCTCGCCGCCCGCGAGCCCGCCTTCGCCCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGTCGAAGCAGAAGACGCGAGCGCACTCGTTCCCGTCGTGCAACTGGCAGAAGCGGCAATTCATACACGAGTTGTGCGAGCAGTTTGGTTGTGAGAGCGTCGCATACGACGCGGAGCCGAACCGAAACGTCGTCGCCACTGCGGACAAGGAGAAGTCCTGGCTGCCGGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGACCGGCAAGCGGCGCGTGCCGGGGCCCGTGCTGCGCGCGCCCGCGCCCGCGCCCGCCGCCAGCAGCGCCAGCACCAAGTGA
Protein Sequence: MSQWNNSYAYNQYQGSNTWNGEADNQYSNQQNYPTAQPSYEPTNQYVNFQEFLSQMQDSSAGASNSASYNPQYQNYPNNHYEYQNMPSTSQNQAQNSYYPTNSSSISGTEFQTTPTSNTAPEPSCNNPMVFKSNLTPTATEFVPKGTSQKQPSPPEDSSSYNGVSEAKSDHIADRNWREKPSSQPSSSRSYNEPRNDPESKKKPDKDRKRSNKGRNNNVSSQNETNSQYNELNSQNGDGGEYESNTYSYESSRHSAEYSSRNHEASSQKYENKNSRRNESTRNYEGSSRNNDSNSYKDESSSRNNESERNYDSQDRNYSNRNNESDNRHYDSSSRNYDSKKRNSNNRNYDSNNRHEGSRNNDSTSRNSDIRGDSGRTSDYRRNDFNGRDSDYNSRNNDYNSHNNDYNSRSNDYNSRSNDYNSRSNDNNSRNDYNDSRNDYNGRNQDYRESNRYDSNRGSKSKSKDADNRTFYNNTAKSSQDVRSVRAERGEGPGRSRNWAGSQRVRPMERTVDEQFAKGYLDNREDRYSKGRPESMFSPMRNRNKQADNAGNTDMTQRERLTEQLDKGTLECLVCCERVKQIDQVWSCGNCYHVLHLRCIRKWAMSSIIGGKWRCPACQNTSSDIPTEYRCMCGAVRSPDYQRGQHGAHTCGQACQRARPCPHPCTLPCHPGPCPPCQATVSKQCGCGAETRSILCSSKLPQVCGRVCSRKLECGVHACAGECHEGACEPCEASVEQVCYCPAGTARSVPCTLATGSSAHWSCGAACARVLACGAHVCRAPCHAPPCAACALQPAAVLACPCGRTRIPKDARKSCTDPIPLCGNICAKPLQCGPAGDKHFCKLDCHEGPCPVCPDKTLVACRCGHSSRDILCAELPQMLDNVLCQKKCNKKLSCGRHRCRASCCSAATHRCGVVCGRMLACQLHRCEQFCHTGHCAPCDRASFEELTCECGAEVLLPPVPCGSKRPACSAPCRRPRACGHPALHACHEGPCPPCVVLTAKRCHGQHEQAARLQRPVPAPARLRAPRAARVPRGPLPALRRAHRQAVPRAARGVYIIIVLAPGPVQQAARLQRPVPAPARLRAPRAARVPRGPLPALRRAHRQAVPRAARGVYIIIVLAPGPVQQAARLQRPVPAPARLRAPRAARVPRGPLPALRRAHRQAVPRAARGVYIIIVLAPGPVQQAARLQRPVPAPARLRAPRAARVPRGPLPALRRAHRQAVPRAARGVYIIIVLAPGPVQQAARLQRPVPAPARLRAPRAARVPRGPLPALRRAHRQAVPRAARGVYIIIVLAPGPVQQAARLQRPVPAPACLRAPRAARVPRGPLPALRRAHRQAPPVPCSKRPACSAPCRRPRACGHPALHACHEGPCPPCVVLTAKRCHGQHEERKTIPCSQEEFSCGLPCGKPLPCGKHSCQKICHKGLCDAGKCTQPCNEKRPSCGHPCAAPCHSGGGDKGDKGDKGDKSVCPSSAPCRKLVRAQCPCGRRTAERSCHENARDLAKIMSALAASKMQEGGSVDLSEVQRPTAMLKTLECDDECRVEARTRRLALALQIRNPDVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKSKQKTRAHSFPSCNWQKRQFIHELCEQFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLARETGKRRVPGPVLRAPAPAPAASSASTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -