Basic Information

Gene Symbol
pnr
Assembly
GCA_932294385.1
Location
CAKOAM010000057.1:1833229-1841221[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-16 3.3e-13 49.5 3.3 1 35 467 500 467 501 0.97
2 2 9.3e-18 2.3e-14 53.1 7.5 1 35 528 561 528 562 0.97

Sequence Information

Coding Sequence
ATGGAAACAGAAACGAATACTACGGCTGGGGAAGGCGAAGACCAACAAGAATTACAAGCTGCCGCCGAGGCACTACAACTTGTAAAACATGAAGATCGAATTGAGCAAGAACAGCCTACGAGCAAGAGCCCCAGTTACGCCGTGGACCCGTCGGCCGAGCCACACGGCTCCCCGCACCCGCAGTCGCAGTCAGTCATAACGTCTCGGCGCTCCGTGCGTACTATCACTGCCGCTGGGCACATCACTACCGATGATGTCGATATAAATCCTGAAGATGGAGTGAAGGATGAACCTCCGGAACCACCGCCAGTTGAACACGAACACCATGTGATTCATCAATACACACCGAAACTAGAAGAAAGCGAGGCTCGAAATATCGTTCAACAACATTACGATGAAGAAAGGTTACGTTTAGCTGAAGCTGAAACTGCACGATACTTAGCTTTTAAACCAGAATCATATAGATCATTACCCTCTCCAGACAAACGCATGCAGGTACAATACGCCCGTGCTCCGCAACGACCCGTGTATAGTAGAGGACTGTCTTTACGCTACGGTGCGCCCCATCACGTCATAGTAGCGCAGGAAGGCAATGCAGATGAACACGGCTCAGACGCTTTCCTAGGGTCTAAAGATAAACCAGAACAATTACAGTATGCCCAAAGTGATGATATCGGCGGGCCTGGAACTAGTGACGGCAGGCAGTACGGAGCAGTTCTAAGTGACCAGGTGGCCGGATCATCATCTCTTGAAATGATCCAAACCACTTCCTTAAACAGCCAGCAGGCAGTCGGTGTTGCATACCAACAGGTTAAATATGAAACTAGAGGTGAACCCGAATTACGGCCTACAACGTATGCTAGTCTGCAGCCTGTAACTTCTGTGCACGGAGGTTATGCATATGCAGGACAGAGCCCACAATATGGTGGGGCCGGTGGGTACGGAGCGTATGGTGGTGGAGGCAAAGAGCTGCTGACGCTTTACGGTGCGGCTGGTGGTGCAGCTTCCGGGACGAGAGGAGACGAATCCCCGCCCGGTCAACTACTCTACCGAAGTGATCCTACATTGTCATCATCGTCACTAACGACGCGTGGAACGCATGTTGTATACGGATCAGTTATCCCACAATCACAAACTGTTTACGAAGCCCCGGCTAGTCCAAACTCACAACAGGTAACATTATACACACACGGTAATGCTGTGCAATACAAAGTCGCCGGAGAGCACTATTTAGGCCAGGGCGGCGGCGTGGAGTACGTGCCCGTGTCGGGGTACGACGGCGGACTGCTCGTAGAGGGCTACGCCGCGCCGACGCCGCAACCGTGGGCGGCCCACAATATGCTTCCTATTGATGACGGGTTTGACCCCAGCATGGCTGGAATGGGAGAAGTGAAAGAATGCGTGAACTGCGCCGCGGCCACCACGCCTCTTTGGCGACGCGACGGGACGGGGCATTACCTCTGCAACGCCTGCGGCCTCTACACTCGCATCAACGGCGTCAATCGACCACCACTTAAAGGACAAAAGGCGAAACCTCAACAAGCGCTGCCGACGAACGGCAATCGGCGCGTAGGCGTGACCTGCGCCAACTGCCGCACCTCCAACACCACGCTGTGGCGGCGTAACAACAACGGCGAGCCCGTCTGCAACGCCTGTGGCCTCTACTACAAACTACACAACGTGAACCGGCCGCTAAGTATGAAGAAGGACGGCATCCAAACGCGAAAGCGCAAGCCGAAGAGCATGGGCGGTGGCCACGGCGTGCCGCGCCCCGGCTCCGGCGCGCTCCCCGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCGGCAGTGGAGGGCGGCAGCGGCACGGGCCTCCTGCTGCTGCCCGCGGCGCGGCATCACACCGACATGATACCATCGCTAGAGCGGGCAGCGTTCGCCGGCGCGCCGGCGCACCACCGCCCGCCCTAA
Protein Sequence
METETNTTAGEGEDQQELQAAAEALQLVKHEDRIEQEQPTSKSPSYAVDPSAEPHGSPHPQSQSVITSRRSVRTITAAGHITTDDVDINPEDGVKDEPPEPPPVEHEHHVIHQYTPKLEESEARNIVQQHYDEERLRLAEAETARYLAFKPESYRSLPSPDKRMQVQYARAPQRPVYSRGLSLRYGAPHHVIVAQEGNADEHGSDAFLGSKDKPEQLQYAQSDDIGGPGTSDGRQYGAVLSDQVAGSSSLEMIQTTSLNSQQAVGVAYQQVKYETRGEPELRPTTYASLQPVTSVHGGYAYAGQSPQYGGAGGYGAYGGGGKELLTLYGAAGGAASGTRGDESPPGQLLYRSDPTLSSSSLTTRGTHVVYGSVIPQSQTVYEAPASPNSQQVTLYTHGNAVQYKVAGEHYLGQGGGVEYVPVSGYDGGLLVEGYAAPTPQPWAAHNMLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGVPRPGSGALPVEAHSHKVLPPLYAAVEGGSGTGLLLLPAARHHTDMIPSLERAAFAGAPAHHRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00290334;
90% Identity
iTF_00660945;
80% Identity
-