Enis021526.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- -
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000138.1:600324-626165[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.017 1.1 10.3 1.0 1 23 218 240 218 240 0.99 2 23 0.22 15 6.7 0.5 2 23 248 269 247 269 0.97 3 23 0.021 1.5 9.9 0.9 1 23 273 296 273 296 0.96 4 23 0.55 38 5.5 2.3 1 23 303 325 303 325 0.98 5 23 0.0029 0.19 12.7 0.4 2 23 332 353 331 353 0.96 6 23 1.7e-05 0.0012 19.7 1.7 1 23 359 381 359 381 0.98 7 23 0.0035 0.24 12.4 2.0 1 21 386 406 386 411 0.92 8 23 0.00042 0.029 15.3 0.1 1 23 419 442 419 442 0.94 9 23 0.039 2.7 9.1 0.6 1 23 448 471 448 471 0.95 10 23 0.039 2.7 9.1 0.6 1 23 506 529 506 529 0.95 11 23 0.039 2.7 9.1 0.6 1 23 564 587 564 587 0.95 12 23 0.039 2.7 9.1 0.6 1 23 622 645 622 645 0.95 13 23 0.039 2.7 9.1 0.6 1 23 680 703 680 703 0.95 14 23 0.039 2.7 9.1 0.6 1 23 738 761 738 761 0.95 15 23 0.039 2.7 9.1 0.6 1 23 796 819 796 819 0.95 16 23 0.039 2.7 9.1 0.6 1 23 854 877 854 877 0.95 17 23 0.039 2.7 9.1 0.6 1 23 912 935 912 935 0.95 18 23 0.039 2.7 9.1 0.6 1 23 970 993 970 993 0.95 19 23 0.039 2.7 9.1 0.6 1 23 1028 1051 1028 1051 0.95 20 23 0.039 2.7 9.1 0.6 1 23 1086 1109 1086 1109 0.95 21 23 0.039 2.7 9.1 0.6 1 23 1144 1167 1144 1167 0.95 22 23 0.55 37 5.5 0.0 5 23 1241 1260 1240 1260 0.91 23 23 0.039 2.7 9.1 0.6 1 23 1266 1289 1266 1289 0.95
Sequence Information
- Coding Sequence
- ATGCTGACCACTCCACAGATAAATGACCAGGGGGGCGCGGGCGACGACACAGCCAGACACACATCAGATCTGTTGACGTTTGAAATGGATGGTGACTCCATCTACCTAATGCACCCGAAAACTCAGCTTTGCGCTAAGATGAAAAGTCTACACACAAACACAACTATGAAGATATGCTTCATATGCCGAGGTATTTTTAACAAATTTTGGAAATTTGCTCACCAATGTCAAAGAACAGATGAAATAATGAATGGAGTTTTAGAGGCACATTTATCCAAACTCAATCCCAACTACTACACCAGTACAACAACCACTCATTACCTAGGCCCCGAGCCCGAAGACTCGGATAACTGTGATCAGTATGATGATGACAAGTATGATGATGATGATTTGCCGCTCATGATGCTGAAGGATAGTAAGGAAGAAGTCAAAGTTGAGAAGGAAGATATGCAAAATGAACTAGAAACAGATGTCCAAGAAGAAAAGTCAAGAGGAAAGAAGAATAGCAAAAAGAAAAAACAATTGAAAGAAGGTTTTAGCTCTAGAATGGTGCAGGAAACAAATGAATATGAAGTCATTAAACTAAGCAAAGAACAGGTGTTAGAAGAAATGTCGGAAAAGGCGAAAAACGAGAAATACTTGAGATCCGTGTACAAATGTGAGCAGTGTGTGAAGGGATTTAATTTTAAAGATGTCATCGACAACCATATGAAGAGACATTCTCAGGGATACGGCACATTGAAATGTGAAATTTGTGCACAGTACTGTCCTAGCGCAGTCTCTATGAGAGGGCACATGAAGTCCCACACCACGAGGTACAAATGCAAGATATGCAACGCTGTGCGTATTTCCCGGCAACATTTGTTGGAGCACTACTCTATAGAGCACACGTTTGACGCTTCCACGTATTCGTGCGACCAGTGCTCATTCACCACCAAGAAGCGCACAGTGATACAGCGGCACGTCAAGTCCCACAAGGTCGGCAAGAATCTGACGTGCAACGTGTGTGGAGCCGGCTTTAACAACATGCACGCCCTGCGGATGCACGTGTCCCGCCACGATCCCGCGCAACGTTTCAGCTGTCCACAGTGCAACATGAAGTTCATATACCCGTCTCTGTTGCACCGGCACATGCTGTCCCACTCGCACAGGGACCACTACTGCGTCGAGTGTGACGTCACCTTCAAGTCGCTAGACAATTTAAAATTGCACTTCAAAAGGGCGAAAAAACACCGAGACCCGTCCACTTACAAATACAAATGCTCCCAATGCGACGAGCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTGTGAGTACAATGCGACGAGCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTTACAATGCGACGAGCGTTTCATCTCCCCCTCCTCGGTGCTGGCGCACTTGAGCGCCGCGCACGGCGCCGCCAAGAGCCACGCGTGCGCTCTGTGCGGCAAGCTCTACTCCAGCCGCGAGAGCGCGCGCAGCCACGAGCGTCGCGCGCATGCGCGGCGCACGCGCTGCCACGCGTGCAGCAAACATACTCGGAAGTACGGGTTGGCCAAGAACGAGACTCCTCTCGGATGTTGCTGCTTTCAGTCGGCCACAGAGAAAAACAAGGTTTGA
- Protein Sequence
- MLTTPQINDQGGAGDDTARHTSDLLTFEMDGDSIYLMHPKTQLCAKMKSLHTNTTMKICFICRGIFNKFWKFAHQCQRTDEIMNGVLEAHLSKLNPNYYTSTTTTHYLGPEPEDSDNCDQYDDDKYDDDDLPLMMLKDSKEEVKVEKEDMQNELETDVQEEKSRGKKNSKKKKQLKEGFSSRMVQETNEYEVIKLSKEQVLEEMSEKAKNEKYLRSVYKCEQCVKGFNFKDVIDNHMKRHSQGYGTLKCEICAQYCPSAVSMRGHMKSHTTRYKCKICNAVRISRQHLLEHYSIEHTFDASTYSCDQCSFTTKKRTVIQRHVKSHKVGKNLTCNVCGAGFNNMHALRMHVSRHDPAQRFSCPQCNMKFIYPSLLHRHMLSHSHRDHYCVECDVTFKSLDNLKLHFKRAKKHRDPSTYKYKCSQCDERFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTVSTMRRAFHLPLLGAGARRRQEPRVRSVRQALLQPRERAQPRASRACAAHALPRVQQTYLQCDERFISPSSVLAHLSAAHGAAKSHACALCGKLYSSRESARSHERRAHARRTRCHACSKHTRKYGLAKNETPLGCCCFQSATEKNKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -