Enis016578.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- Zfy2
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000073.1:738058-749189[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0075 0.51 11.4 3.3 1 23 249 271 249 271 0.98 2 14 7.7 5.2e+02 1.9 1.0 2 23 276 297 276 297 0.93 3 14 0.18 13 7.0 1.2 2 23 302 324 301 324 0.92 4 14 0.02 1.4 10.0 1.5 1 23 327 349 327 349 0.97 5 14 9.1e-06 0.00062 20.5 1.9 1 23 352 375 352 375 0.98 6 14 0.0083 0.57 11.2 0.7 2 22 384 404 383 408 0.92 7 14 0.0012 0.083 13.9 1.9 1 23 421 444 421 444 0.97 8 14 0.29 20 6.4 4.4 3 23 455 476 450 476 0.82 9 14 0.29 20 6.4 4.4 3 23 487 508 482 508 0.82 10 14 0.013 0.89 10.6 2.4 1 23 513 536 513 536 0.97 11 14 0.29 20 6.4 4.4 3 23 579 600 574 600 0.82 12 14 0.68 46 5.2 4.3 1 23 606 629 606 629 0.92 13 14 6.5e-05 0.0044 17.9 0.2 3 23 640 660 639 660 0.99 14 14 0.00042 0.028 15.3 1.1 1 23 666 689 666 689 0.95
Sequence Information
- Coding Sequence
- ATGGAGAACATAGGAGTCAAAAATGAATTTTGTACAAAATACACGACATCATGCCACGCGTGTCTCAGCACGGATAGGGGTCTCTCGCCTGTGGTCGAATACGTCGATATTTATTACAAAATTTGCGATAATCAAAGTATGATACCTCCCGATGTGTTCTTGTGTTGGGAATGCATAGCATTGCTGAAGAGATTTAGGATGTTCGCAAAGAAAGTAGCAGAAGCTCAGAGAATACTTCGGTTTTATAACACAAACAAACAGGATCCGTTCCCCGACTCCCTATCAAACCTCTCCACCCACACCAACAACAAACAAATATATTACACACACGAAGAACCGGAAATAAAAGAAATCAAACAAGAAATAGACATAGACGAGGATTGCCATTTCGACACGGACATCAAAGACGAGGAACCTATTGACGAAGATGCATTGCCCAAGAATGATATTGTGGAAACCGTGGAACCATCCAAGTCCGATTGGAAGGAATTTAACATGAAGCGAATACTAAACAGAAAAGCGAAGTATAGATTTGTGAACACTAAGCTTAAGAAACACAGACGGTTGCTGATAAGGAAGATCCCATTGCAGATGAGCGAAGTGTTGTCTGGTTTGGAAGAGGAGAGGAGTGATGGTTTGTTTTTGGGAGAGGAGTTTAAGTGTGTGAGCTGTGTGGCGATCTGGAGCGATGAGGATGGGCTGGTGAAGCATAAGGAGAAATGCCATGATGAGACCACTGGCCCCTACAACTGCGACATATGCAACAGTCGCTGCCCATCCCGCGACAAGCTTCAATATCATCAGAACAAGCACCGCTACCAGAGGGAGTGCAAAGTGTGCCGGGTGCAGTGTTACTCGCAGGACGTCATGGACAGACATCTGGCGCAGCACGATCGGATGGTGCAGTGTCTCGCGTGCGGATTGTGTTTCAAGAATGTGCGTCTGTTCTACAGTCATTACAAGGCGCTGCACAGCAGTTTTGTGTGCGACGTGTGCGGTAAACGATGCAAGGCGCGTTCTATTATTGAAAAACACCTCAGATATCACTTCGGCTACGAATGCCCTTACTGTAAGAAGAAACTGAAAAATTCCTCGTCATATAAGAACCACATAGAAACACAGCACTCGTCGTCCGTCTCGGACAACTCGTACTGCGTGCAGTGCGACAGAAGATTCACGAGCGACCGCATGTACAAGCGGCACTTGCAGTCGAGCGCGGCGCACGCGCAGGAGCGGGACAACACTAGGACGAAACGCAAATACCCGTGTCCGGAGTGCAGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTACACAGTAAGCAGAGCAAGTATTACTGCGAGGACTGCGACCGGTGCAGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTACACAGTAAGCAGAGCAAGTATTACTGCGAGGACTGCGACCGGTGCAGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTACACATACACTGCGAGTACCCGTGTCCGGAGTGCAGCAACGTGTACTCGCGGCGCACGTACAAGAACAACCACTACCGCCACGTACACAGTAAGCAGAGCAAGTATTACTGCGAGGACTGCGACCGGTGCAGCAACGTGTACTCGCGGCGCACGTACAAGAACAACCACTACCGCCACGTACACAGTAAGCAGAGCAAGTATTACTGCGAGGACTGCGACCGGTGCAGCAACGTGTACTCGCGGCGCACGTACATGAACAACCACTACCGCCACGTACACAGTAAGCAGAGCAAGTATTACTGCGAGGACTGCGACCGGCATTTCCTGAACCGGACGCGGTACCTGGACCACCGGCGGTTCCAGCATGAGGGCGCCAAGAGAGACAAGGACAAACTGTGCAATATATGTGGTCGCGGCTTCGCGGCAAACAGAACGCTAGTAAACCACATCCGAACGCACTCGGGCGAGCGCCCGTTCGCGTGCGAGTACTGCGGCGCCAAGTTCACGCAGAAACACGCCATGCTGTCACACGTCAAGTACATACACTTGAAGAGCAAGCGCACAAGCTGGCACGAGTAA
- Protein Sequence
- MENIGVKNEFCTKYTTSCHACLSTDRGLSPVVEYVDIYYKICDNQSMIPPDVFLCWECIALLKRFRMFAKKVAEAQRILRFYNTNKQDPFPDSLSNLSTHTNNKQIYYTHEEPEIKEIKQEIDIDEDCHFDTDIKDEEPIDEDALPKNDIVETVEPSKSDWKEFNMKRILNRKAKYRFVNTKLKKHRRLLIRKIPLQMSEVLSGLEEERSDGLFLGEEFKCVSCVAIWSDEDGLVKHKEKCHDETTGPYNCDICNSRCPSRDKLQYHQNKHRYQRECKVCRVQCYSQDVMDRHLAQHDRMVQCLACGLCFKNVRLFYSHYKALHSSFVCDVCGKRCKARSIIEKHLRYHFGYECPYCKKKLKNSSSYKNHIETQHSSSVSDNSYCVQCDRRFTSDRMYKRHLQSSAAHAQERDNTRTKRKYPCPECSNVYSRRTYMNNHYRHVHSKQSKYYCEDCDRCSNVYSRRTYMNNHYRHVHSKQSKYYCEDCDRCSNVYSRRTYMNNHYRHVHIHCEYPCPECSNVYSRRTYKNNHYRHVHSKQSKYYCEDCDRCSNVYSRRTYKNNHYRHVHSKQSKYYCEDCDRCSNVYSRRTYMNNHYRHVHSKQSKYYCEDCDRHFLNRTRYLDHRRFQHEGAKRDKDKLCNICGRGFAANRTLVNHIRTHSGERPFACEYCGAKFTQKHAMLSHVKYIHLKSKRTSWHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -