Enis014256.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia nisella
Gene Symbol
-
Assembly
GCA_932294385.1
Location
CAKOAM010000059.1:2018532-2032925[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.04 2.8 9.1 0.6 2 23 2 24 1 24 0.91
2 16 4.6 3.2e+02 2.6 0.1 3 20 102 119 101 121 0.92
3 16 0.087 6 8.0 5.7 1 22 174 195 174 197 0.88
4 16 0.00086 0.059 14.3 0.5 1 22 274 295 274 295 0.95
5 16 6.6 4.5e+02 2.1 0.0 2 23 323 344 323 344 0.93
6 16 0.11 7.7 7.7 0.4 2 23 367 388 366 388 0.97
7 16 0.0019 0.13 13.2 0.1 1 23 392 414 392 414 0.96
8 16 0.14 9.4 7.4 0.4 1 15 419 433 419 442 0.78
9 16 0.022 1.5 9.9 0.5 1 23 448 471 448 471 0.95
10 16 0.00014 0.0095 16.8 1.2 1 23 478 501 478 501 0.98
11 16 6.2e-05 0.0042 17.9 1.7 1 23 508 530 508 530 0.96
12 16 2.3e-06 0.00016 22.4 3.1 1 23 536 558 536 558 0.98
13 16 0.0014 0.099 13.6 0.6 3 23 563 584 563 584 0.97
14 16 0.7 48 5.2 0.3 1 14 661 674 661 678 0.83
15 16 0.33 23 6.2 0.1 1 23 717 739 717 739 0.94
16 16 7 4.8e+02 2.0 0.1 2 23 763 785 762 785 0.91

Sequence Information

Coding Sequence
ATGGTCTGTGTGTACTGCTGTGAGAGTTTCGATGACCCCACTCAGTACAGAAAACATATGGACGGTGATCATCAAACGTTCAAAGTGCGCACGGCTTTCGTTCACTGCAGCGAAGGTTTTATTAAAGCTGACTGCACGGAACTCCGTTGTCGTCTATGTGCTGAACACCTCGATAACTTAGAAGCAGCCGCTAGTCATTTGCACTTAGAACACGACAAGAAATTAAATCTAAACTTCGAGCTTGGCATACAGCCTTTTAAACTTGAGAAGGACAAACTTGCGCTGCGCTCCAAGTCGATGTTTTGCTTGTACTGCGATGACGAATTCGACGATCCGGCGAAGTTCCGCGAGCATGCGCACTCGTGCCAGCGCTCCTGCTCCTACGCCACTTCCTTCGCATACTCGATCCGAAACCAGGAACATATTAAAGTGGAGTGCTCTAACATGGGATGCCGCATATGCGAATTGCGCAAGCGGCATCTGATGGAGTTCCATAATTATAAGCCGGGCGCGGAAATGTACGAGTGTACTACTTGCCATATGACTTTCAAGACGAGGTCTCAAAAGTACCATCACAATGTAAAAGCCCATAGAACTAAGAAGGAGACGGAATATGGGTATCCGTGTGGACGCAGCCAAACCGAACACGAAACTGTGATAAAGGTAGAGCCTAGCGTTATACCAATAGAAAATTTGCTCAAAGAAAAGCCAAGATACCAGCGCAGCGCTCGAGCCGAGGCTAGGTTCGCCACGAAGAAAAATGCCACAGCCATACTCGAGTGCTGGTCCGTGAGCCCGTTCCGTTGGAAGCGGAACCAATTCAAATGCGCTTACTGCGAAGCCAGTTTCACAGACTGCGCACTTCTGCGGCTTCATATAAGCACTTGCTCACCGCAACACAGCGTCAAGGATATCTACAGCAAGTTCAAAGAGATGTCTCTAATCAATGTTGACGTGACCGAGGCAGTCTGCCGTCTCTGCGCGCTGCCATACAGCGACGTGAAACAGATGCGGGACCACGTTATCGAACACGGCTACGATTACGAAATAAACCAACCCGACGGCGTTCTACCTTTTTTCCTTAACAAAGAATCTTGGAAATGCGTCATTTGCCAAGATACTTTCAACAACTTCCTAAAACTGTACGAACACATGAATATACATTACCAACACTATATTTGCCCCACTTGTGGAAAGGGATATATGACGGCGCCCAGATTGAGAAAGCATTCAGAGGTTCACATCACTGGAACGTTTCCCTGCAATGAATGCCCCAAAATATTTAGAATGCGTGCTGCTAGGGACTACCACAAAGCTCACGCTCACGCCAAAGCACCCAGATACGAATGCCCTCAATGTAATATGCGTTTCGACGGCTACTACGACAGAATGAACCATCTCAATGAAACCCACAGTGAAAAAGAAGTGTCATATCGTTGTCCACACTGCGAGCTCTCCTTTAAGACTTCAGGAAAGCGGGCTATTCATGTCCGAACGGTTCATTTTCCGCCTCAACGTGATTTCAGATGTTCTAGTTGCGAATGGAGTTTCAAAACAGCTTACGAACTAAGAAGGCACAAGGTAAAACATTCTGGAGAAAGGAATTTTCACTGTACTGTGTGTGATAAATCGTTTCCACGAAATAGGGCCTTGAGAACACATTTGAAAACTCACGATGATATGGGCTGTAAGTGGTGTGGAGCTTTATTCAAGCAGCGGATGCAATTGTTGACTCACATGAGGGAAATGCATTCGGATATGTGTTCCGCTATTGCGGACGCGGAGACAAAAGTAGGAGTTAGACGTGTTAGAAAGTTAAAGGAGATCGTAAGCGCTCGTCAGATGCGCCGGCGCCGCCGAGCGAACAACGAGTTGCCTGAGGAATCCGAAAAGCGAATTTCCAAAACTATGATGCGGAGAAACGCTATGACACTTCTAGAATGTTCCACAGCTTGGGCATTCCGCTGGTTCCACAGCGCTTTTTACTGCTCGTACTGTGATGCTAAGTTTGTAGACACCGGTCCACTGCGGTCCATCGACCACAAACTTAAATGGAAACCGAAGCGCAAGTATAACGATCACAGAGATAATGCGGCTATAATTATAGAGTGTTCCAACGTGTGCCCGTTCAGGTGGAAGCGAGGGACGTTCACTTGTGCCTTCTGTTCCATATCGTTCGGGGACTTCAGCGGCGTCAGAGACCACGCGCTCGAACACCCTAACCGGGTCGAGGCCATGCGACTAGCACGCCCCTTAGACAACGTCAAAGTAGAGATCAGCGGCCTCCGCTGCGAACTCTGTCTACAACTCCTTAAAGACGTTGAAACACTAAAGGAACACTTGCTTCAAATCCACGATAAACCTATTAGCAAAGATCACGGCATCGGTGAAGGAAAGGTGAAGAGATCGTTCATGCTAAACCAGAATCCACCCTTCTGGTCAAACAAGCGTTGGCCGAGGCAGAGGATATTAACGCTGCATCTGCAGCTGTCAAACGAGAGGAGGGGGAACGGAGACGTACCAACTTTAGGAATAATATCTCTACTATCATAG
Protein Sequence
MVCVYCCESFDDPTQYRKHMDGDHQTFKVRTAFVHCSEGFIKADCTELRCRLCAEHLDNLEAAASHLHLEHDKKLNLNFELGIQPFKLEKDKLALRSKSMFCLYCDDEFDDPAKFREHAHSCQRSCSYATSFAYSIRNQEHIKVECSNMGCRICELRKRHLMEFHNYKPGAEMYECTTCHMTFKTRSQKYHHNVKAHRTKKETEYGYPCGRSQTEHETVIKVEPSVIPIENLLKEKPRYQRSARAEARFATKKNATAILECWSVSPFRWKRNQFKCAYCEASFTDCALLRLHISTCSPQHSVKDIYSKFKEMSLINVDVTEAVCRLCALPYSDVKQMRDHVIEHGYDYEINQPDGVLPFFLNKESWKCVICQDTFNNFLKLYEHMNIHYQHYICPTCGKGYMTAPRLRKHSEVHITGTFPCNECPKIFRMRAARDYHKAHAHAKAPRYECPQCNMRFDGYYDRMNHLNETHSEKEVSYRCPHCELSFKTSGKRAIHVRTVHFPPQRDFRCSSCEWSFKTAYELRRHKVKHSGERNFHCTVCDKSFPRNRALRTHLKTHDDMGCKWCGALFKQRMQLLTHMREMHSDMCSAIADAETKVGVRRVRKLKEIVSARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLECSTAWAFRWFHSAFYCSYCDAKFVDTGPLRSIDHKLKWKPKRKYNDHRDNAAIIIECSNVCPFRWKRGTFTCAFCSISFGDFSGVRDHALEHPNRVEAMRLARPLDNVKVEISGLRCELCLQLLKDVETLKEHLLQIHDKPISKDHGIGEGKVKRSFMLNQNPPFWSNKRWPRQRILTLHLQLSNERRGNGDVPTLGIISLLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-