Enis016581.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- ZNF526
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000073.1:794717-817129[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0045 0.31 12.1 0.3 1 23 120 143 120 143 0.95 2 11 0.0049 0.34 11.9 2.1 1 23 150 172 150 172 0.97 3 11 0.073 5 8.2 2.6 1 23 176 198 176 198 0.99 4 11 0.016 1.1 10.3 1.3 2 23 203 225 202 225 0.94 5 11 0.00086 0.058 14.3 4.3 1 23 228 251 228 251 0.97 6 11 8e-05 0.0054 17.6 3.2 1 23 254 277 254 277 0.95 7 11 0.31 21 6.3 0.1 3 20 286 303 285 305 0.91 8 11 0.00023 0.015 16.1 0.1 2 23 318 340 317 340 0.91 9 11 0.00012 0.0084 17.0 0.8 1 23 346 369 346 369 0.98 10 11 0.00027 0.018 15.9 0.4 3 23 380 400 379 400 0.97 11 11 0.0034 0.23 12.4 0.0 1 23 406 429 406 429 0.94
Sequence Information
- Coding Sequence
- ATGGAGTCGGTGCAGATTTGCTGGGAGTGTAACAGAGGACTATCAAAAATGTCCGACTTCCAGAATCAAGTGCTCAGAGCCGCTGATCTTCTAGAAATGGGACAGGCACCTCATTGTAAAGCTGCACGCACGAGGACGTGCGCACGTCAGCATGGCCGTGACGGCGGCGTCGTCGTGCTGCAAGCTAAAATTCAACTCAGTGTAAACAACACCTGCACCAGTGCACCTGGCCTCACCGATCACGCCACTGCGGCGTCATGCCGACACCTCACACCTGGAAAAGTTAAAATAAGTGCCGAAGAACTAAGAGGCTGTATGGAGAAGGAGAGACATAGTGAATTGTATAACTCATATAATTTTAAATGTGAGAGCTGTGTGCTTGGGTTTAAGGATGAAAATTCATTGGCTAAGCATATTGGAAAACGTCATAGTGAGACTACAGTCCCATACACCTGCGATATATGCAACTGTCGAATGACCAAAAAGTCTACACTCGCGGCACACATATATAACCACTACTACGTGTACGAGTGCACGCTGTGCGCGTTCGTCAGCCGCCACAAGACGCAACGGCGCGTTCATGCGAGGACGCATAAGACAGTGCTGCAGTGCGTCAAGTGTGAATTGAAATTTGGGTCACGTCGGGAATTCTTTAAGCACTACAAAGAGTGGCATGAGAGGTATATCTGCGAGCACTGCGGCGTCAGCTTCAAGATGCGGTACTGCATCAAAGACCACATCAGGAAACAACACTCCCCATTTGAATGTAAGCACTGTGACAAGCGGTTTTCTCGATACAACGGACTGTGGTTACACAATAAGGTACGCCACAGCGAGGCCTCGCAAGCCGCGTACTGTGTGGAATGCGACCGGCGGTACGCGGACGTGTACCGGTACCGCTGGCACCTCAGCAACAGCGCGCGCCACCGGCCCCGCGCCAAGCTGCGGGTCCCGTGCCCCGGCTGCGACAAGGTGTTCACGAAGAAGATCTACATGAAAGACCACTACGATCTCGTCCACCTCAAGAAATACAAGTATCGATGCGAGCAGTGCGATAAGAACTTCCTCCGCAATGCGGACTTGGCGCAACACCGTAAGAGAGTCCACGAGGGGATCCTGCCGCCCAAGAACAAGATCTGCTACGTGTGCGGCCGAGGATTCACCACGAACAAGATCCTGAACAATCACGTGCGCACGCACACGGGCGAGCGGCCGTTCGCGTGCGCGCGCTGCCCCGCCGCCTTCGCGCAGCGCGCCGCGCTGCAGCAGCACGCGCGCGCCAGGCACGCGGGACACGGCGCTAGTGACGCGTGCGGCACGTGA
- Protein Sequence
- MESVQICWECNRGLSKMSDFQNQVLRAADLLEMGQAPHCKAARTRTCARQHGRDGGVVVLQAKIQLSVNNTCTSAPGLTDHATAASCRHLTPGKVKISAEELRGCMEKERHSELYNSYNFKCESCVLGFKDENSLAKHIGKRHSETTVPYTCDICNCRMTKKSTLAAHIYNHYYVYECTLCAFVSRHKTQRRVHARTHKTVLQCVKCELKFGSRREFFKHYKEWHERYICEHCGVSFKMRYCIKDHIRKQHSPFECKHCDKRFSRYNGLWLHNKVRHSEASQAAYCVECDRRYADVYRYRWHLSNSARHRPRAKLRVPCPGCDKVFTKKIYMKDHYDLVHLKKYKYRCEQCDKNFLRNADLAQHRKRVHEGILPPKNKICYVCGRGFTTNKILNNHVRTHTGERPFACARCPAAFAQRAALQQHARARHAGHGASDACGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -