Basic Information

Insect: Epinotia nisella
Gene Symbol: Zfx
Assembly: GCA_932294385.1
Location: CAKOAM010000025.1:751202-760174[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0075 0.51 11.4 2.2 2 23 75 96 74 96 0.96

2 12 0.028 1.9 9.5 1.5 3 23 104 125 102 125 0.94

3 12 0.26 18 6.5 1.4 2 23 133 155 132 155 0.93

4 12 1.2e-05 0.00084 20.1 4.5 1 23 161 183 161 183 0.95

5 12 2.5e-06 0.00017 22.3 2.0 1 23 189 211 189 211 0.97

6 12 0.054 3.7 8.7 1.4 1 20 217 236 217 238 0.92

7 12 0.19 13 7.0 3.3 3 23 257 278 256 278 0.88

8 12 0.00018 0.012 16.4 3.3 1 23 569 591 569 591 0.97

9 12 0.00073 0.05 14.5 3.1 1 23 598 620 598 620 0.95

10 12 0.016 1.1 10.3 0.1 1 23 628 653 628 653 0.96

11 12 1.2e-05 0.0008 20.2 2.0 1 23 659 683 659 683 0.97

12 12 3.8e-05 0.0026 18.6 0.6 1 22 689 710 689 710 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0075	0.51	11.4	2.2	2	23	75	96	74	96	0.96
2	12	0.028	1.9	9.5	1.5	3	23	104	125	102	125	0.94
3	12	0.26	18	6.5	1.4	2	23	133	155	132	155	0.93
4	12	1.2e-05	0.00084	20.1	4.5	1	23	161	183	161	183	0.95
5	12	2.5e-06	0.00017	22.3	2.0	1	23	189	211	189	211	0.97
6	12	0.054	3.7	8.7	1.4	1	20	217	236	217	238	0.92
7	12	0.19	13	7.0	3.3	3	23	257	278	256	278	0.88
8	12	0.00018	0.012	16.4	3.3	1	23	569	591	569	591	0.97
9	12	0.00073	0.05	14.5	3.1	1	23	598	620	598	620	0.95
10	12	0.016	1.1	10.3	0.1	1	23	628	653	628	653	0.96
11	12	1.2e-05	0.0008	20.2	2.0	1	23	659	683	659	683	0.97
12	12	3.8e-05	0.0026	18.6	0.6	1	22	689	710	689	710	0.96

Sequence Information

Coding Sequence: ATGGATTCGGCGTTATCCTTCTTCAGTCTTCCCTTCGTGGACTCGGAGAGTGCTGATCTGGTGCTAAACATCAGGAACGTGAACTCCGACTGCGGTTATGATGAATTGCACACAAGTTTGCCTTCGCACGGCGGTCTGCTTGGTCCGGAAGATGTGTTGGCCCAGTTCCTGTCCCCGGACGAGCCGCTGGAGGAGCCTGACCTCAACGGCCCCACCACACTACACTGCGAGATATGTAGGAAAAAGTTCGATAATGCTAAGAAGTATTATGGGCATCTAAGGATACATTCCAAGGGCAATGCTTGGATTTGTGATAAGTGCCCCGACCAGAAGTTTGCCACCAAACAACACCTCATGAAGCACAGTCTGACCCACAAGCCGCTTGAGCGAGTCTGGCGCTGCCAGCACTGCACTCTCTCCTTTGAGGCTCTCTGGAGGCTCCAGCAACATCTGTTCTCTACTCATTTAGAGTACAGACCACACAAGTGTGATGAATGTGGAAAGTCTTTCCATAAGAAATCTGATTTAAAAAGGCATGAAGGCATGCACAGCAATGTAAATAAGTTTGCGTGCTCCGTTTGCGGGGTAGAGTTCAAAGATAAGTGCAACCTCAAGAGGCACATGTTGCGGCACACCAATGAGAAGCCCTATTGCTGTGCGGGGTGCGGCAATAGATATAAACAGTTAGCATCCATGAAAAGGCACAGTCAGAAGTGCCCCAAGAATCAGAACAACGTTAAAGTAGAGCAAACAGGCCGGAATAATCACTGCAGAGTTTGCGGCATGACGTTTCAGTACAAGAGTGCCTTGCTGGAACATTGCATGAGACAGCACACAAATGCCACTAACCCCGCAAACCCCACCACCAACACAGAGAAAGATGACAAACCCCACGTACAACTTACGATAGACCACAACAGAACAGTCGACAACATTGTAGACGACATTCTCTCCGCCGAAGACGACTATTTGACCATGTCCACTCAAAACGAAATTCTGAATGTCTACAATCAAAGTCACAATGAAATACAAGACATCAATGACAACCTTATGCATGTAGAATTCCTAAAAGCAATGAACCAACTGCACAGTTTGGATGATGAACTGTTTTACAATGATCTTGACTTCGATAATTTCCAAGCTAACCATATATTTAACATGAACACAAATGACATGGATTATGGGGATAAAAACAGTGAAATTCTATTCGATTTCGCTGATAATGGAAGAAGCATGGATCAAGACATCATGAACGTGCTTTCAGAGGTCGCCCCATGTATTCCAGAGACTAATAAGACTGAACCAACAGAAAACCCTCCAGTTTCAGTGAATGAATGTGCTACAATTTTCGAAACCGATGTAGATTTAGAAGCTAGTACAAACTTAGCAGCGAATTTGAACCAGTTGATTGGCGAAAACAATGTCCAGTACGTGTCTACTGAAGATGATGACACATTTATAATCAGTTTAAACAGTGCAATTGACGCCGAACAGTTAACAGATATGTTGAATATCGGAGTTGAATTAATTGAAAATAATGAAGAAGAAAAGACGTCAGAAGTGACAGCTGAACTAGATAAACCTGATGATAATATGGATGACCCGATTGTGGTGAGGATCGAAGAGCCTGTACTTTGTAAAGAAGGGTCTAATGTTGGGAAAGATAATGTCATAGTGAAGCCTAAGATTAAGAAATGTACTCTATTTATTTGTCGGACGTGTAACAGAGTATTTAAAAAGAAGGATAATTATAAATCACACAAAGCAACCCACAACCCATCGCTGCGCGCGCACCGCTGCCGCTCGTGCGGGCTCCGCTTCAGCTACCGCTCCACGCTGAACAAGCACCGCGCCGCTCATGAGTCGCGCGCGCCGCGGTGGTTCCGCTGCGAATATGCGGAATGCGGGAAAGAGTACGATGCTGCCTGGAAGTTGAAAAATCACGTGGAGCGCGACCACGAGAAGTTGACGCCGTACAAGTGCGCGCGGCAGGGTTGTGGGAAGAGGTTCTACAAGCAGTCAGACCTGCAGAAACACGAAAGATACCACTCGGGCGAGAGGCCATACGCGTGCGACATCTGTAAGCGCGCGTTCCAGCAGATCTCACATCTCAAGCGCCACGTGCGGACCGTCGACTGCACTCAACAGTAA
Protein Sequence: MDSALSFFSLPFVDSESADLVLNIRNVNSDCGYDELHTSLPSHGGLLGPEDVLAQFLSPDEPLEEPDLNGPTTLHCEICRKKFDNAKKYYGHLRIHSKGNAWICDKCPDQKFATKQHLMKHSLTHKPLERVWRCQHCTLSFEALWRLQQHLFSTHLEYRPHKCDECGKSFHKKSDLKRHEGMHSNVNKFACSVCGVEFKDKCNLKRHMLRHTNEKPYCCAGCGNRYKQLASMKRHSQKCPKNQNNVKVEQTGRNNHCRVCGMTFQYKSALLEHCMRQHTNATNPANPTTNTEKDDKPHVQLTIDHNRTVDNIVDDILSAEDDYLTMSTQNEILNVYNQSHNEIQDINDNLMHVEFLKAMNQLHSLDDELFYNDLDFDNFQANHIFNMNTNDMDYGDKNSEILFDFADNGRSMDQDIMNVLSEVAPCIPETNKTEPTENPPVSVNECATIFETDVDLEASTNLAANLNQLIGENNVQYVSTEDDDTFIISLNSAIDAEQLTDMLNIGVELIENNEEEKTSEVTAELDKPDDNMDDPIVVRIEEPVLCKEGSNVGKDNVIVKPKIKKCTLFICRTCNRVFKKKDNYKSHKATHNPSLRAHRCRSCGLRFSYRSTLNKHRAAHESRAPRWFRCEYAECGKEYDAAWKLKNHVERDHEKLTPYKCARQGCGKRFYKQSDLQKHERYHSGERPYACDICKRAFQQISHLKRHVRTVDCTQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00410701;
90% Identity: iTF_00290002;
80% Identity: -