Enis020396.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- -
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000119.1:735335-768674[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.6 1.1e+02 4.0 5.6 1 23 896 919 896 919 0.98 2 20 0.0011 0.073 14.0 0.8 2 23 927 948 927 948 0.95 3 20 0.0011 0.073 14.0 0.8 2 23 971 992 971 992 0.95 4 20 0.0011 0.073 14.0 0.8 2 23 1002 1023 1002 1023 0.95 5 20 0.0011 0.073 14.0 0.8 2 23 1046 1067 1046 1067 0.95 6 20 0.0011 0.073 14.0 0.8 2 23 1090 1111 1090 1111 0.95 7 20 0.0011 0.073 14.0 0.8 2 23 1134 1155 1134 1155 0.95 8 20 3.1 2.1e+02 3.1 0.9 1 20 1159 1178 1159 1181 0.85 9 20 8.6e-05 0.0059 17.5 2.6 1 23 1186 1209 1186 1209 0.97 10 20 0.001 0.069 14.1 0.1 2 23 1218 1240 1218 1240 0.94 11 20 0.058 4 8.6 0.1 3 23 1305 1326 1304 1326 0.92 12 20 8.8e-05 0.006 17.4 0.7 1 23 1331 1354 1331 1354 0.95 13 20 9.6 6.6e+02 1.6 0.2 3 10 1383 1390 1382 1394 0.84 14 20 9.6 6.6e+02 1.6 0.2 3 10 1440 1447 1439 1451 0.84 15 20 9.6 6.6e+02 1.6 0.2 3 10 1497 1504 1496 1508 0.84 16 20 9.6 6.6e+02 1.6 0.2 3 10 1554 1561 1553 1565 0.84 17 20 0.00012 0.0084 17.0 0.1 3 23 1611 1631 1610 1631 0.98 18 20 0.00019 0.013 16.4 0.3 1 23 1637 1659 1637 1659 0.96 19 20 0.11 7.4 7.7 1.8 2 23 1666 1687 1665 1687 0.95 20 20 1e-05 0.0007 20.4 0.4 1 23 1693 1716 1693 1716 0.96
Sequence Information
- Coding Sequence
- ATGTCTACAGTAAAGTCGGAAGCAGCGGAAGAGCTGCGAGCGTGTAGGATTTGCCTCGCAACAGACACTAGACTCTTTGGCATTCAGGAACAGCGGTTAGATGAGGCTTTTGCCGATATTATTGGCATTACGCTGTCAGTATGGGATGGGTGCCCTGTGCATGTGTGCGTGTGGTGCCGCGCGCAGCTCGTGAGCGCGCAGTCGCTGCGCGCGCGCGCCGCCCGCGCCGACGCGCTGCTCAAAGAAGCACTCATGCAGGAACACATTATAACTACAAGCTACCTCGCAACCATAGACCGGGTGTCGCACCAACTGTCCATCTGTCTGTCCGTCCACCGCCCCGCCACCACGGAGGCGACCCACGACGAAACTAAACAGGAGGTGGACGATGATGACGACTTTGACTTGTACCATCCAGGCTCCCTTGCCTCGCGCCCGGCGCGGAGCAGGACAAACGGGCGCCGGCGCGACCGCGCGCGGTGCCCTGTGATTGGTCGATCGCTGTTCAAACTGTACAACAATAACATTGTTGGACAGTTTGAAGTCATAGATGGCCTGTTCGTGCGACAATTCGACGAACCCATAATCAATCTAAAGAACAGCATGATGCTGGAAAGTATGAAGAGTTTGGAAGTAGAAGTAGAAGTAAAGACTGATGCGAGCGAGGTGGAGATAAAAGAAGAGGAGCCCGTGAAGAAAAGGAAAGAGAAGGGGAGAGGGGAAAGGGTAAAAGTGAAGAGAGACAAAAGCGTGAAAACCAAGAAGAGAGTCCAGAAGGTGGCAGAAGAGAAGGAGCCGAAGAAGTATAAGCGGAAGCTGAAAGGGTTCAAGAAGTTCTTCGCCAGCGAGGACGACTACCTCAAGTTTGAGAACACTTACAATATTGATGCGTACGAATTGGAGCAGCGTCGGGTTGAGGCACGCACGGCGCCTTTTTTGCTCAAATTCGTACGCGCTCACGCGCTGTGCGCCTCAGTGTGCGTGGCGGGGAGGTGGACGGACAGACAGATGGACAGTTGGTGCGACACCCGGTCTATGGTTGCGAGCCTCGGGTTGAGGCACGCACGGCGCCTATTTTGCCCTAATTCGTACGCGCTCACGCGCTGTGCGCGAGCAGCGCGCGGCGAGCCCCCCCAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGCGCGAGCAGCGCGCGGCGCCGCCGGAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGCGCGAGCAGCGCGCGGCGCCGCCGGAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGCGCGAGCAGCGCGCGGCGCCGCCGGAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGCGCGAGCAGCGCGCGGCGCCGCCGGAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGCGCGAGCAGCGCGCGGCGCCGCCGGAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGCGCGAGCAGCGCGCGGCGCCGCCGGAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGCGCGAGCAGCGCGCGGCGCCGCCGGAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGCGCGAGCAGCGCGCGGCGCCGCCGGAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGCGCGAGCAGCGCGCGGCGCCGCCGGAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGCGCGAGCAGCGCGCGGCGCCGCCGGAGCCGGGCGACTGCCCGCGCTCACAGGCGCCGCAGTGTGCGCGCCTCGCGGCACTCGCACGTGCATCCGAGCGCGCCGCGGACAGAGCGACAAGATCGAACTTGTTTGTGTGCGAGGCGCAGATAGTGAAACTGACAGAGGAAGAGCAGCAGAAGGAGCTGGAGGCCCGCAAAGAGTCCAGCAACTACCTGCGCTCCGCGTACCGCTGCGAGCGGTGCTTCAAGGGGTTCCTGTCGCACACGACCTTCGAGAACCACCAGAAGAAGACCCACGATCCGAGTAACGGGCGCAACGAGTGCTCGCTGTGCGGCGCGCGCTTCCGGCACCCGGCGGGGCTCCGCAAGCACTTCGAGTCGCACACGCTCAAGTTCATCTGCAAGATATGCCAGTTCATGACACGGCACCGTAATAGTAACGGGCGCAACGAGTGCTCGCTGTGCGGCGCGCGCTTCCGGCACCCGGCGGGGCTCCGCAAGCACTTCGAGTCGCACACGCTCAATAATAGTAACGGGCGCAACGAGTGCTCGCTGTGCGGCGCGCGCTTCCGGCACCCGGCGGGGCTCCGCAAGCACTTCGAGTCGCACACGCTCAAGTTCATCTGCAAGATATGCCAGTTCATGACACGGCACCGTAATAGTAACGGGCGCAACGAGTGCTCGCTGTGCGGCGCGCGCTTCCGGCACCCGGCGGGGCTCCGCAAGCACTTCGAGTCGCACACGCTCAAGTTCATCTGCAAGATATGCCAGTTCATGACACGGCACCGTAATAGTAACGGGCGCAACGAGTGCTCGCTGTGCGGCGCGCGCTTCCGGCACCCGGCGGGGCTCCGCAAGCACTTCGAGTCGCACACGCTCAAGTTCATCTGCAAGATATGCCAGTTCATGACACGGCACCGTAATAGTAACGGGCGCAACGAGTGCTCGCTGTGCGGCGCGCGCTTCCGGCACCCGGCGGGGCTCCGCAAGCACTTCGAGTCGCACACGCTCAAGTTCATCTGCAAGATATGCCAGTTCATGACACGGCACCGGAGCATGGCTGTCATGCACGCAGATTTCCATTCGGGGAAGACTTTCGTCTGCAAGTACTGTGGATTAACCTTCAACAAACAGACGACATTCAACACACACACCCGCGTCCAGCATCCTCTAGAAAACGCTTCCGCCGGCACCTGCGACGTGTGCGGCGAGACCTTCACGGGGAAACGAGGCCTCCAGCAGCACAAGGCCATCGCGCATAAAAAGCTAAAAGTTAAGGATTGCGATGGAATTTTGATGGGGAAACGAGTGATACAGCAGCACAAGGCCATCGCGCGCTATAAGCTGACGACGCCGGAGCTGAAGTGTCGCTCGTGCCTCGTGCAGTTCGAGAATGGCGACGCGAAAACACGCCACAAGATCAACAACGTTTGCGACCCCAAACTAAGGCCGTGTCCGGCGTGCGGCGAGCGGTTCGCGGACGAGGACACAGCCAAGAAACACTACCAGGACAACCACGGGAAGGAACACTACAAGTGCGACCAGTGCGACACAACCTTCGCAAAGAAATCGTCCCTAGCCGTCCACTTCGAGCGCGTGCACCTCAAGATAAAGCCGAAGAAGCCCGCCTTCTACAAGTACCACCAGTACGGCAAGGGCAGGATGAAGATACGGAACGCGGAGATATGCGAGATCTGCGGGAAGGGATATCCGGGGCATTCGCCCGCCGAACACAAAACTCGTGTTACCTTCGTTAAGAAATCGTCCCTAGTTGTACACTTTAAGCCGAAGAAGCTCGCATTCTACAAGCACCACCAGTACGGGAAGGGCAGGATGAAGATACGGAACACGGAGATATGCGAGATCTGCGGGAAGGGATATCCGGGGCATTCGCCCGCCGAACACAAAACTCGTGTTACCTTCGTTAAGAAATCGTCCCTAGTTGTACACTTTAAGCCGAAGAAGCTCGCATTCTACAAGCACCACCAGTACGGCAAGGGCAGGATGAAGATACGGAACGCGGAGATATGCGAGATCTGCGGGAAGGGATATCCGGGGCATTCGCCCGCCGAACACAAAACTCGTGTTACCTTCGTTAAGAAATCGTCCCTAGTTGTACACTTTAAGCCGAAGAAGCTCGCATTCTACAAGCACCGCCAGTACGGGAAGGGCAGGATGAAGATACGGAACACGGAGATATGCGAGATCTGCGGGAAGGGATATCCGGGGCATTCGCCCGCCGAACACAAAACTCGTGTTACCTTCGTTAAGAAATCGTCCCTAGTTGTACACTTTAAGCCGAAGAAGCTCGCATTCTACAAGCACCACCAGTACGGGAAGGGCAGGATGAAGATACGGAACACGGAGATATGCGAGATCTGCGGGAAGGGATATCCGGACACAACGTGGCTGCGGTATCACCAGCGGACCCATACGGGCGAGCGTCCATACAAATGCTCGCAGTGCACGAAGAGCTACATGACGCCCGCGGGGCTACAGCGTCACGTGGTGATCCACACGGGGGTGCGCCGCTGGCAGTGCTCGCAGTGCCCCAAGACCTTCCTGCATCAGTCTTCCATCTACACGCACAAACTGGTCCACACAGGTGAGAAGCCGTACGTCTGTCAGATCTGCAGCAAAGCGTTCACGCAATCAGGCTCCCTACAAACACACGTCAAATACGTGCACATGAAGTTGAAGCCGCCTCCCAGACGCAGGCGGCAGGAGCTGTATAAACCGCCCAGCTGA
- Protein Sequence
- MSTVKSEAAEELRACRICLATDTRLFGIQEQRLDEAFADIIGITLSVWDGCPVHVCVWCRAQLVSAQSLRARAARADALLKEALMQEHIITTSYLATIDRVSHQLSICLSVHRPATTEATHDETKQEVDDDDDFDLYHPGSLASRPARSRTNGRRRDRARCPVIGRSLFKLYNNNIVGQFEVIDGLFVRQFDEPIINLKNSMMLESMKSLEVEVEVKTDASEVEIKEEEPVKKRKEKGRGERVKVKRDKSVKTKKRVQKVAEEKEPKKYKRKLKGFKKFFASEDDYLKFENTYNIDAYELEQRRVEARTAPFLLKFVRAHALCASVCVAGRWTDRQMDSWCDTRSMVASLGLRHARRLFCPNSYALTRCARAARGEPPQPGDCPRSQAPQCARLAALARASERAADRATRSNLFVREQRAAPPEPGDCPRSQAPQCARLAALARASERAADRATRSNLFVREQRAAPPEPGDCPRSQAPQCARLAALARASERAADRATRSNLFVREQRAAPPEPGDCPRSQAPQCARLAALARASERAADRATRSNLFVREQRAAPPEPGDCPRSQAPQCARLAALARASERAADRATRSNLFVREQRAAPPEPGDCPRSQAPQCARLAALARASERAADRATRSNLFVREQRAAPPEPGDCPRSQAPQCARLAALARASERAADRATRSNLFVREQRAAPPEPGDCPRSQAPQCARLAALARASERAADRATRSNLFVREQRAAPPEPGDCPRSQAPQCARLAALARASERAADRATRSNLFVREQRAAPPEPGDCPRSQAPQCARLAALARASERAADRATRSNLFVREQRAAPPEPGDCPRSQAPQCARLAALARASERAADRATRSNLFVCEAQIVKLTEEEQQKELEARKESSNYLRSAYRCERCFKGFLSHTTFENHQKKTHDPSNGRNECSLCGARFRHPAGLRKHFESHTLKFICKICQFMTRHRNSNGRNECSLCGARFRHPAGLRKHFESHTLNNSNGRNECSLCGARFRHPAGLRKHFESHTLKFICKICQFMTRHRNSNGRNECSLCGARFRHPAGLRKHFESHTLKFICKICQFMTRHRNSNGRNECSLCGARFRHPAGLRKHFESHTLKFICKICQFMTRHRNSNGRNECSLCGARFRHPAGLRKHFESHTLKFICKICQFMTRHRSMAVMHADFHSGKTFVCKYCGLTFNKQTTFNTHTRVQHPLENASAGTCDVCGETFTGKRGLQQHKAIAHKKLKVKDCDGILMGKRVIQQHKAIARYKLTTPELKCRSCLVQFENGDAKTRHKINNVCDPKLRPCPACGERFADEDTAKKHYQDNHGKEHYKCDQCDTTFAKKSSLAVHFERVHLKIKPKKPAFYKYHQYGKGRMKIRNAEICEICGKGYPGHSPAEHKTRVTFVKKSSLVVHFKPKKLAFYKHHQYGKGRMKIRNTEICEICGKGYPGHSPAEHKTRVTFVKKSSLVVHFKPKKLAFYKHHQYGKGRMKIRNAEICEICGKGYPGHSPAEHKTRVTFVKKSSLVVHFKPKKLAFYKHRQYGKGRMKIRNTEICEICGKGYPGHSPAEHKTRVTFVKKSSLVVHFKPKKLAFYKHHQYGKGRMKIRNTEICEICGKGYPDTTWLRYHQRTHTGERPYKCSQCTKSYMTPAGLQRHVVIHTGVRRWQCSQCPKTFLHQSSIYTHKLVHTGEKPYVCQICSKAFTQSGSLQTHVKYVHMKLKPPPRRRRQELYKPPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -