Enis007693.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia nisella
Gene Symbol
-
Assembly
GCA_932294385.1
Location
CAKOAM010000027.1:6865512-6875400[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 2.4 1.6e+02 3.5 0.3 3 17 55 69 54 70 0.88
2 10 7.4e-05 0.0051 17.7 3.6 1 20 217 236 217 239 0.94
3 10 6.5e-05 0.0045 17.8 0.4 1 23 245 267 245 267 0.99
4 10 1.7e-06 0.00012 22.8 2.1 1 23 273 295 273 295 0.98
5 10 1.7e-06 0.00012 22.8 0.8 1 23 301 323 301 323 0.98
6 10 6.7e-06 0.00046 21.0 0.1 1 23 329 351 329 351 0.96
7 10 1.2e-06 8.5e-05 23.3 0.7 1 23 357 379 357 379 0.98
8 10 0.00056 0.038 14.9 4.9 1 23 385 407 385 407 0.98
9 10 0.0007 0.048 14.6 1.6 5 23 416 434 414 434 0.93
10 10 1.9e-05 0.0013 19.5 5.3 1 23 440 463 440 463 0.97

Sequence Information

Coding Sequence
ATGGACTTTACACAAATGTGTCGAATTTGCCTTGAATCAAACAAAATATCATATGATATTTACGCGAGCTTCTACGCGAAAAGAAGTACTTTGTACTGTGATATGCTTTCTAATTGCACAAAACTTAAGCCCACCAAAAATGATGGTCTACCCAGCGCAATTTGTAAAGACTGCAGCCGCCAGTTGAAGCGTTCATACGCCTTCAATTTGAAATGTGAAGAAAGTGACATAAAGCTAAGAAACTATTTGGAAAACATCAATATTGTTGTAAAAGATGATGAAGATCGTAAATCGAATTTAATTGAAGGTGAAGAAATTCCTGACCTTAAAACTGAAACAGATGAAGTGAAAAGTGAAGATTCGGATGTCAAAGATGAAGTGCAGACACTGGAAAATGGAAATAGTGAAGTCAAAGATTATACAGATAATGATATTAAGGATGATATTAAACTTGAGGTGACCTGCAATGATTACGACAATGGTAATGACAGTGGATGGGATGCTGATGACGACAACATCTTCCTGGGAGATATACAGCTTAAAAAGAAGAGCAAAGAATTTAATATAGAAGAATTAAAACCCAAAAAGAGAAGAGGCAGAAAAAAAAGAGAGGATTTAGGGCCCCAGCTACCGGAGAGCAAGTTGCCCCACCAGTGCGACATCTGTGGCAAGTTCCTGAGCACCAAGAGCAACCTGAAGGCGCACAAGATCTGCCACACGGACCTGAGACCGTACAAGTGCGGAGACTGCCCGGCTACCTTCAGAGGCTACAGCGCGCTGTTCCAACACAAGAAAGTCCACACACGAGAGACCCCGTACCACTGCGAGTACTGCCCGAAACAGTTCAGCCGGCGCACCGGCCTCGTCAACCACATCCGGATGCACACAGGTGAAAAACTATATAGCTGCGACGTGTGTTTTAAAACGTTCGTGCAGAGTGCGCAGCTCTCCATACACATGAAGAGGCACAAGGGCGACAAGACCTACCTGTGCCAGGACTGCGGGAAAGGATTCCCTATAAAAGCAGACCTGAAGGTCCACCAGAGGATCCACAATGGTGAAAAGCCGTATTCTTGTCATCTTTGCGCCAAGACATTTGCCACCTCCGGCAACCTCTCCATACACATCAGGATACACAACAAAGAAGTTAGGTACCACTGTAAAGAATGTCAGCGCGGCTTCGTCACCTGCAGCGCCTACAATGTCCATCTCAAACGCCATAAAGGCCAGAGGGACTATCACTGCGAGTGCGGCAAAACATTCTACACCTCCTCAGCCCTCAAACAACACAAAGTAGTACACACTGGAGAAAAGAAGTACCAATGCAAGATATGCGAGAGAAAATTCTCACAGACCAGCCATCTGAGCAGGCATTTTAAGAGAGACCACGCGAAACCCAACATGCCTTTACCGTCTTCGGATCATTATAAACGCCCGATGTGTGGGACGACTCCCCAAACTATGGCGCATATGCCGTCTTGTCCGGCGTGCCCGCACACATGCTCCGGACAAGACCTCCGTGACGCGACAGATAGGGCTTTAGCCATTGCCAATTTCTGGTCCCGCACAATCTAA
Protein Sequence
MDFTQMCRICLESNKISYDIYASFYAKRSTLYCDMLSNCTKLKPTKNDGLPSAICKDCSRQLKRSYAFNLKCEESDIKLRNYLENINIVVKDDEDRKSNLIEGEEIPDLKTETDEVKSEDSDVKDEVQTLENGNSEVKDYTDNDIKDDIKLEVTCNDYDNGNDSGWDADDDNIFLGDIQLKKKSKEFNIEELKPKKRRGRKKREDLGPQLPESKLPHQCDICGKFLSTKSNLKAHKICHTDLRPYKCGDCPATFRGYSALFQHKKVHTRETPYHCEYCPKQFSRRTGLVNHIRMHTGEKLYSCDVCFKTFVQSAQLSIHMKRHKGDKTYLCQDCGKGFPIKADLKVHQRIHNGEKPYSCHLCAKTFATSGNLSIHIRIHNKEVRYHCKECQRGFVTCSAYNVHLKRHKGQRDYHCECGKTFYTSSALKQHKVVHTGEKKYQCKICERKFSQTSHLSRHFKRDHAKPNMPLPSSDHYKRPMCGTTPQTMAHMPSCPACPHTCSGQDLRDATDRALAIANFWSRTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00680853;
90% Identity
iTF_00657518;
80% Identity
-