Enis024080.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- -
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000321.1:1-8003[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 3.3e-05 0.0023 18.8 8.6 2 23 17 38 16 38 0.97 2 33 4.5e-05 0.0031 18.3 0.7 1 23 44 66 44 66 0.98 3 33 2.2e-05 0.0015 19.3 1.3 1 23 72 94 72 94 0.98 4 33 0.00069 0.047 14.6 1.1 1 23 100 122 100 122 0.98 5 33 0.002 0.14 13.2 1.2 1 23 128 150 128 150 0.97 6 33 0.0037 0.25 12.3 1.2 3 23 158 178 156 178 0.97 7 33 0.0037 0.25 12.3 1.2 3 23 206 226 204 226 0.97 8 33 0.0037 0.25 12.3 1.2 3 23 254 274 252 274 0.97 9 33 0.0037 0.25 12.3 1.2 3 23 302 322 300 322 0.97 10 33 0.0037 0.25 12.3 1.2 3 23 350 370 348 370 0.97 11 33 0.0037 0.25 12.3 1.2 3 23 398 418 396 418 0.97 12 33 0.0037 0.25 12.3 1.2 3 23 446 466 444 466 0.97 13 33 0.0037 0.25 12.3 1.2 3 23 494 514 492 514 0.97 14 33 0.0037 0.25 12.3 1.2 3 23 542 562 540 562 0.97 15 33 0.0037 0.25 12.3 1.2 3 23 590 610 588 610 0.97 16 33 0.0037 0.25 12.3 1.2 3 23 638 658 636 658 0.97 17 33 0.0037 0.25 12.3 1.2 3 23 686 706 684 706 0.97 18 33 0.0037 0.25 12.3 1.2 3 23 734 754 732 754 0.97 19 33 0.0037 0.25 12.3 1.2 3 23 782 802 780 802 0.97 20 33 0.0037 0.25 12.3 1.2 3 23 830 850 828 850 0.97 21 33 0.0037 0.25 12.3 1.2 3 23 878 898 876 898 0.97 22 33 0.0037 0.25 12.3 1.2 3 23 926 946 924 946 0.97 23 33 0.0037 0.25 12.3 1.2 3 23 974 994 972 994 0.97 24 33 0.0037 0.25 12.3 1.2 3 23 1022 1042 1020 1042 0.97 25 33 0.0037 0.25 12.3 1.2 3 23 1070 1090 1068 1090 0.97 26 33 0.0037 0.25 12.3 1.2 3 23 1118 1138 1116 1138 0.97 27 33 0.0037 0.25 12.3 1.2 3 23 1166 1186 1164 1186 0.97 28 33 0.0037 0.25 12.3 1.2 3 23 1214 1234 1212 1234 0.97 29 33 0.0037 0.25 12.3 1.2 3 23 1262 1282 1260 1282 0.97 30 33 0.0037 0.25 12.3 1.2 3 23 1310 1330 1308 1330 0.97 31 33 0.0037 0.25 12.3 1.2 3 23 1358 1378 1356 1378 0.97 32 33 0.0037 0.25 12.3 1.2 3 23 1406 1426 1404 1426 0.97 33 33 0.0037 0.25 12.3 1.2 3 23 1454 1474 1452 1474 0.97
Sequence Information
- Coding Sequence
- ATGTTTCAAGGAGTGCACTTCCGCCTCCACACCGGCGAGAAGCCCCTAAAATGCACCGAGTGCAACAAGACCTTCCGCCGGCACTCCACGCTGTGCCAGCACATGAAGAAACACCGCGGCATCCGGAACCACGTGTGCAACGTCTGCAGCAAGGCGTTCTACGAGGTCTCCAAGCTCAACGCGCACATGAGAGTGCACACTGGTGAGCGTCCATTCGAGTGCCAGTTCTGCGAGCGTCGTTTCGCGCAGCAGTCCGCACTGATCTACCACCGGCGGACGCACACTGGTGAAAAGCCATACAGCTGCAAGCTATGCTCGGCGCGGTTTACCACCTCCTCCGCGAGGAACAACCACATGGTCACACACACGGGGAACAAGAGGTTCGTGTGCCCAGTATGCTTCAAAGGCTGCACGTCCCGCGCAGAACTGCGGGTCCACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAGGTCAGTACTCGAGCAAACACACGGGCGAGAAGCTGTTCGGCTGCTCGCTGTGTTCCGCGCGGTTCAGCTCCGCGTCCTACCTCGCCGTGCACCGCCGCCACCACACGGGCGAGCGCAAGTACAACTGCAACGTGTGCGGCCGAG
- Protein Sequence
- MFQGVHFRLHTGEKPLKCTECNKTFRRHSTLCQHMKKHRGIRNHVCNVCSKAFYEVSKLNAHMRVHTGERPFECQFCERRFAQQSALIYHRRTHTGEKPYSCKLCSARFTTSSARNNHMVTHTGNKRFVCPVCFKGCTSRAELRVHSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGRGQYSSKHTGEKLFGCSLCSARFSSASYLAVHRRHHTGERKYNCNVCGR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -