Basic Information

Insect: Epinotia nisella
Gene Symbol: -
Assembly: GCA_932294385.1
Location: CAKOAM010000052.1:7245504-7264416[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0086 0.59 11.2 3.5 2 23 116 138 116 138 0.96

2 17 0.0022 0.15 13.0 0.3 1 23 145 168 145 168 0.95

3 17 0.0014 0.094 13.7 0.1 2 21 235 254 235 255 0.93

4 17 0.0014 0.094 13.7 0.1 2 21 315 334 315 335 0.93

5 17 0.0014 0.094 13.7 0.1 2 21 395 414 395 415 0.93

6 17 0.0014 0.094 13.7 0.1 2 21 475 494 475 495 0.93

7 17 0.0014 0.094 13.7 0.1 2 21 555 574 555 575 0.93

8 17 0.0014 0.094 13.7 0.1 2 21 635 654 635 655 0.93

9 17 0.0014 0.094 13.7 0.1 2 21 715 734 715 735 0.93

10 17 0.0014 0.094 13.7 0.1 2 21 795 814 795 815 0.93

11 17 0.0014 0.094 13.7 0.1 2 21 875 894 875 895 0.93

12 17 0.0014 0.094 13.7 0.1 2 21 955 974 955 975 0.93

13 17 0.0014 0.094 13.7 0.1 2 21 1035 1054 1035 1055 0.93

14 17 0.0014 0.094 13.7 0.1 2 21 1124 1143 1124 1144 0.93

15 17 0.0014 0.094 13.7 0.1 2 21 1204 1223 1204 1224 0.93

16 17 0.0014 0.094 13.7 0.1 2 21 1284 1303 1284 1304 0.93

17 17 0.0014 0.094 13.7 0.1 2 21 1364 1383 1364 1384 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0086	0.59	11.2	3.5	2	23	116	138	116	138	0.96
2	17	0.0022	0.15	13.0	0.3	1	23	145	168	145	168	0.95
3	17	0.0014	0.094	13.7	0.1	2	21	235	254	235	255	0.93
4	17	0.0014	0.094	13.7	0.1	2	21	315	334	315	335	0.93
5	17	0.0014	0.094	13.7	0.1	2	21	395	414	395	415	0.93
6	17	0.0014	0.094	13.7	0.1	2	21	475	494	475	495	0.93
7	17	0.0014	0.094	13.7	0.1	2	21	555	574	555	575	0.93
8	17	0.0014	0.094	13.7	0.1	2	21	635	654	635	655	0.93
9	17	0.0014	0.094	13.7	0.1	2	21	715	734	715	735	0.93
10	17	0.0014	0.094	13.7	0.1	2	21	795	814	795	815	0.93
11	17	0.0014	0.094	13.7	0.1	2	21	875	894	875	895	0.93
12	17	0.0014	0.094	13.7	0.1	2	21	955	974	955	975	0.93
13	17	0.0014	0.094	13.7	0.1	2	21	1035	1054	1035	1055	0.93
14	17	0.0014	0.094	13.7	0.1	2	21	1124	1143	1124	1144	0.93
15	17	0.0014	0.094	13.7	0.1	2	21	1204	1223	1204	1224	0.93
16	17	0.0014	0.094	13.7	0.1	2	21	1284	1303	1284	1304	0.93
17	17	0.0014	0.094	13.7	0.1	2	21	1364	1383	1364	1384	0.93

Sequence Information

Coding Sequence: ATGGCTGGGGCTAAAATTAATACGAAGGCCAAAGGAAAAGACGATAGGAGCAAGGGAAACAAAACTATGAACAATACTAATGAAGAAAGTGAAGATCACGACTTTTCTTTGCTAAGGAAACCTGTGCTAACCAGTATTACAGGTTTTGCCCAAGCAAGAAAAATATTTGACTTTGCCACAGAGGAAGTGCAGGAACTAGATAATATAATATCGCGAGACAATGCAGTTCTACAAAGTGATGGCGCATTCAACGTGCAAAGTTCAGAGAACGCTGACAAGACAGAAGATAATGACAGTGTCATACAAATTAGTGATGACGACGACAGCGACGAGGGCCGCGTACCGAAATGCAAGATCTGCGACATGCAGTTCTCAACGCAGAAGACCCTGAAGTTCCATATGAAGTACAAACACTTGGAGAGTCGGTTGGTGTACCCATGTCCTGATTGTTTTGAAATATTCTCCACATCATGGAGTGTTTATCGACATCTCTTCAAAGTACACAGGAAATCAGCGGCGCAAATCAGAAGGCTGCGAGAGGCCATCCAAGCTAAAGCTTTTCGGATGAACAACCCTCCAGCTTTTTACGAGAAAAAGAAGAATACCAAACCAATTACACCCCAAAAGATCACTGAAGAAGAGAGATTAGACCAGGAGAACCAGGCCTGGATGGAGAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCTGTGGTGTTCACCGAGGGGATTGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGGTGAGTCGAGGCTTTTGTCTCAGGCCTGGATGGACAACCTGGAGGGCGACGGCGAGCTGCCGCGCTGCGGGGGCTGCGGGCGCACGTTCGAGCGCCGCGCCGCGCTCGCCGCGCACACGCACACGTGCCAGCCGCGCTCCCGCGCCCTCGCGCGCCGCCCCGACGCCAAGCGCATCGAGATACAGATCCGCAAGGACTACCACAAGGGACCCAATGGGAATCCGCTGCACAGGGACACTGAAGTCAAACCAGTCAATGAAGACAGTCAGACTGCGGCAAAAACTATACAGAAGAACCCTGAACCCGTTGAGAAAACTTCTCTCCCGACTGAAAACAATGTTGAAGAGAAGGAGAAAAACCCTGAACCAATTCCCGAGCAGATTGTGAAAAACACTGAACTAATGGAAATTGAACCCGTTCAGAAGAAGGCGGAATCCGAAAATGTCCTCGAAGAAGCCACCATGGACATAATAGATGACAGATCGAGCGACAGCAGTCCTGAAAAGGTAGCAGTCAAATCGGAAGTAGAACAGCAGACAAAAGTCAGATTACCTTTCGCTCATCAAGCCGAAAAAAGTAACCTCGCCGCGTTCAAGCAGAGAATGCGAGGAGACATAGACATGGAAAAGCTGCTCTGCAAGAAATGTGACACGAAACACGGCCGAGTACAAGAGCTCTACGAACACATGGCAGCCCATTACAAATGGATACGTTACGCTTGCAAACTGTGCAATTTCAAGAACTATGAGTTTGAAAAGTTGCCCGAGCACGTCAAGGTAGTCCATAAGCTGAAAGGCGATTCTGATTTCTACTTCAGTACGGTGAAAGCGGTGGATGGAGCGGAGGCCGTGGAAGAGAGTGACGTGAACGAGGATAGTTGCGAGTCGCGGGCCGGCCGGCGCTCCAGCGACTGCGGCCGCCTGTCGGACGACAGCTCGTCCAGCAGCTCGCGCGTGGAGGGCGCCAGGAAGCGCAAGATGTACCACAACAGGAGAAGCGGCAAAAGGAGGAAGGACCCCGACGAAGCAGACAATATGAAGGAGAGTGATGCAGCTACGGACAGAACAAATAACATCGAGGATAGTCAATCACCCTCGAATTTGAAAACGTTTGAAGAAAATTCTTCAGACATGGATGATATTGAAGAAAAAATGACCAGACAGACAATGAAAGAAATGATAATGCCTTCAGTTGCAACTCGAAGACCTGTGCGCAATAAGACTAAACCAAAGAATGAAGACTTTGAGTATGATCTATCCAACCTCTTAAAGATGGAGGCACAAGGGTACAGAGACTCTCAGATAGTCACAACTACAAAACCGACGCAAACCAAGAAGAAATTGCTTCAAGAACAACAAATCAATTACGATAATATGAACAAAGAACACATTGGTGCGTTAGCATTGCTGTCGAAAAAAGCAGTTGACAAAGCTGCTGCTGAACTGAAAACTACCAACTTCGGCCCTCCAATTTTCAACATTCAAAAGGAACAAAGACTGCCCAATATATTTGCCAGACCCATGGTACCAAAAATATCCAGAGGCGATAAAATCTCACCGAGAAAAGATGCAACAGAAGAAGATGTGAAGGACGGTCCCAGTTTAAATAAATTACAGAAAATACAGGAAACTGTCAAAGAATTAAAGATCAACAAGGCTAATGCCGAAGAAATTACAAATAACCCTGGCAAAGAAGATGTTACACCTTCAATGAGTACAACCAACGATAAAGCAAGCACTGAAAATGAACAGCCTTTAAATGTTGAATCTAAAGAAACTACCCTGGTGTTGTAG
Protein Sequence: MAGAKINTKAKGKDDRSKGNKTMNNTNEESEDHDFSLLRKPVLTSITGFAQARKIFDFATEEVQELDNIISRDNAVLQSDGAFNVQSSENADKTEDNDSVIQISDDDDSDEGRVPKCKICDMQFSTQKTLKFHMKYKHLESRLVYPCPDCFEIFSTSWSVYRHLFKVHRKSAAQIRRLREAIQAKAFRMNNPPAFYEKKKNTKPITPQKITEEERLDQENQAWMENLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPVVFTEGIGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTGESRLLSQAWMDNLEGDGELPRCGGCGRTFERRAALAAHTHTCQPRSRALARRPDAKRIEIQIRKDYHKGPNGNPLHRDTEVKPVNEDSQTAAKTIQKNPEPVEKTSLPTENNVEEKEKNPEPIPEQIVKNTELMEIEPVQKKAESENVLEEATMDIIDDRSSDSSPEKVAVKSEVEQQTKVRLPFAHQAEKSNLAAFKQRMRGDIDMEKLLCKKCDTKHGRVQELYEHMAAHYKWIRYACKLCNFKNYEFEKLPEHVKVVHKLKGDSDFYFSTVKAVDGAEAVEESDVNEDSCESRAGRRSSDCGRLSDDSSSSSSRVEGARKRKMYHNRRSGKRRKDPDEADNMKESDAATDRTNNIEDSQSPSNLKTFEENSSDMDDIEEKMTRQTMKEMIMPSVATRRPVRNKTKPKNEDFEYDLSNLLKMEAQGYRDSQIVTTTKPTQTKKKLLQEQQINYDNMNKEHIGALALLSKKAVDKAAAELKTTNFGPPIFNIQKEQRLPNIFARPMVPKISRGDKISPRKDATEEDVKDGPSLNKLQKIQETVKELKINKANAEEITNNPGKEDVTPSMSTTNDKASTENEQPLNVESKETTLVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -