Enis016566.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia nisella
Gene Symbol
-
Assembly
GCA_932294385.1
Location
CAKOAM010000073.1:591910-608587[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.0075 0.51 11.4 1.3 3 21 7 25 6 30 0.91
2 28 0.0075 0.51 11.4 1.3 3 21 39 57 38 62 0.91
3 28 0.0075 0.51 11.4 1.3 3 21 71 89 70 94 0.91
4 28 0.0075 0.51 11.4 1.3 3 21 103 121 102 126 0.91
5 28 0.0075 0.51 11.4 1.3 3 21 135 153 134 158 0.91
6 28 0.0075 0.51 11.4 1.3 3 21 167 185 166 190 0.91
7 28 0.0075 0.51 11.4 1.3 3 21 199 217 198 222 0.91
8 28 0.0075 0.51 11.4 1.3 3 21 231 249 230 254 0.91
9 28 0.0075 0.51 11.4 1.3 3 21 263 281 262 286 0.91
10 28 0.0075 0.51 11.4 1.3 3 21 295 313 294 318 0.91
11 28 0.0075 0.51 11.4 1.3 3 21 327 345 326 350 0.91
12 28 0.0075 0.51 11.4 1.3 3 21 359 377 358 382 0.91
13 28 0.0075 0.51 11.4 1.3 3 21 391 409 390 414 0.91
14 28 0.0075 0.51 11.4 1.3 3 21 423 441 422 446 0.91
15 28 0.0075 0.51 11.4 1.3 3 21 455 473 454 478 0.91
16 28 0.0075 0.51 11.4 1.3 3 21 487 505 486 510 0.91
17 28 0.0075 0.51 11.4 1.3 3 21 519 537 518 542 0.91
18 28 0.0075 0.51 11.4 1.3 3 21 551 569 550 574 0.91
19 28 0.0075 0.51 11.4 1.3 3 21 583 601 582 606 0.91
20 28 0.0075 0.51 11.4 1.3 3 21 615 633 614 638 0.91
21 28 0.0075 0.51 11.4 1.3 3 21 647 665 646 670 0.91
22 28 0.0075 0.51 11.4 1.3 3 21 679 697 678 702 0.91
23 28 0.0075 0.51 11.4 1.3 3 21 711 729 710 734 0.91
24 28 0.0075 0.51 11.4 1.3 3 21 743 761 742 766 0.91
25 28 5.2e-05 0.0036 18.2 2.0 1 23 774 797 774 797 0.94
26 28 0.00091 0.062 14.2 2.5 1 23 802 825 802 825 0.97
27 28 1.3e-06 8.8e-05 23.2 3.3 2 23 833 854 832 854 0.97
28 28 1.3e-05 0.00091 20.0 1.3 1 23 860 883 860 883 0.95

Sequence Information

Coding Sequence
ATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGACAAGATGGCGTCGGCGGCGTACTGCGCGGCGTGCGGCATCAGCTTCTCGTCGGCGTGCTCCTACCAGCGCCACATGAAGAACAGCCTCAAGCACGTCACCCAGGACCAGCTCCGGTTCATCTGCGACCACTGCAACAAGCGATTTGCGGATAAGACGAAGCTTCGAGACCACATAGAGGAGAAACATCTGCACCGGACCTACCAGTGCCACTTATGTCACAAGCCGTCCAAGAACCGCGTGGGGCTAGACCAGCACATTCGCAACGTGCACCGCGGACGCCCCAACAACAAGATGTGCCATCACTGCGGGAAGGGGTTCCCGACCAAAGTGCAACTGGAGTCACACATAAGAACACACACAGGCGAGCGTCCGTACATCTGCGAGTTCTGTCCGACCACGTTCTCGCAGCAGTCCAACCTCTACAAACACAACCGACAGGTACATCTGAACATCAAATCCAAACGTTACCCGCTCTGCAAGAAAACTAAACAGGAAGAGGAAACGAACAGACCACAGACTATAGAGGATTTCCGGCCCGTGGCGGTTTTGCACTTCGAGCCGGAGCGAGGGTTTCTATGA
Protein Sequence
MASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHDKMASAAYCAACGISFSSACSYQRHMKNSLKHVTQDQLRFICDHCNKRFADKTKLRDHIEEKHLHRTYQCHLCHKPSKNRVGLDQHIRNVHRGRPNNKMCHHCGKGFPTKVQLESHIRTHTGERPYICEFCPTTFSQQSNLYKHNRQVHLNIKSKRYPLCKKTKQEEETNRPQTIEDFRPVAVLHFEPERGFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-