Enis011920.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- -
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000048.1:247303-264148[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 36 8.6e-05 0.0058 17.5 2.5 1 23 164 186 164 186 0.98 2 36 0.27 18 6.5 0.0 1 18 192 209 192 209 0.90 3 36 0.0015 0.1 13.5 1.0 1 23 218 240 218 240 0.97 4 36 0.7 48 5.2 0.1 1 17 246 262 246 263 0.89 5 36 0.0015 0.1 13.5 1.0 1 23 272 294 272 294 0.97 6 36 0.7 48 5.2 0.1 1 17 300 316 300 317 0.89 7 36 0.0015 0.1 13.5 1.0 1 23 326 348 326 348 0.97 8 36 0.7 48 5.2 0.1 1 17 354 370 354 371 0.89 9 36 0.0015 0.1 13.5 1.0 1 23 380 402 380 402 0.97 10 36 0.7 48 5.2 0.1 1 17 408 424 408 425 0.89 11 36 0.0015 0.1 13.5 1.0 1 23 434 456 434 456 0.97 12 36 0.7 48 5.2 0.1 1 17 462 478 462 479 0.89 13 36 0.0015 0.1 13.5 1.0 1 23 488 510 488 510 0.97 14 36 0.7 48 5.2 0.1 1 17 516 532 516 533 0.89 15 36 0.0015 0.1 13.5 1.0 1 23 542 564 542 564 0.97 16 36 0.7 48 5.2 0.1 1 17 570 586 570 587 0.89 17 36 0.0015 0.1 13.5 1.0 1 23 596 618 596 618 0.97 18 36 0.7 48 5.2 0.1 1 17 624 640 624 641 0.89 19 36 0.0015 0.1 13.5 1.0 1 23 650 672 650 672 0.97 20 36 0.43 29 5.8 0.0 1 17 678 694 678 695 0.90 21 36 0.0015 0.1 13.5 1.0 1 23 704 726 704 726 0.97 22 36 0.27 18 6.5 0.0 1 18 732 749 732 749 0.90 23 36 0.0015 0.1 13.5 1.0 1 23 758 780 758 780 0.97 24 36 0.7 48 5.2 0.1 1 17 786 802 786 803 0.89 25 36 0.0015 0.1 13.5 1.0 1 23 812 834 812 834 0.97 26 36 0.7 48 5.2 0.1 1 17 840 856 840 857 0.89 27 36 0.0015 0.1 13.5 1.0 1 23 866 888 866 888 0.97 28 36 0.7 48 5.2 0.1 1 17 894 910 894 911 0.89 29 36 0.0015 0.1 13.5 1.0 1 23 920 942 920 942 0.97 30 36 0.43 29 5.8 0.0 1 17 948 964 948 965 0.90 31 36 0.0015 0.1 13.5 1.0 1 23 974 996 974 996 0.97 32 36 3.3 2.2e+02 3.1 0.1 1 17 1002 1018 1002 1019 0.89 33 36 6.4 4.4e+02 2.1 0.1 15 23 1079 1087 1075 1087 0.89 34 36 0.00058 0.04 14.9 0.8 1 23 1093 1114 1093 1114 0.98 35 36 0.0003 0.02 15.8 5.8 1 23 1120 1142 1120 1142 0.97 36 36 0.00014 0.0096 16.8 1.6 1 23 1148 1171 1148 1171 0.95
Sequence Information
- Coding Sequence
- ATGGAGGACTCGGTGGTTGCCGTGACGGACGTGATGCACTCGTGCCGCTGCTGCCTGCGGTGTGCTCCGGACAGGGACCTGAAGACGCCGTACACTTATCTCGGCACTACGGAGATATACTCGGACATGCTCAGAGAGTGCTTCGATTTACAACTGGAAGTGGGCAGCAATGGCTCGTGCGGCATCTGCTCTGCGTGCGTGGGCCGCCTGCGAGACGCGCGCGACTTCAAGCTGCAAGTGCAGCGCAGCCAAGAGGAGCTGCAGGCGCGGCTACAGGGAGACCTAATTCTTGAAGGTGTGAAACTTGAGGTCAAGTCAGAGGATGATGAAGATGAAATCTGTTTTGTGTTGTATGAAGATCCCGTGGTGAAGTTAGAGGTGGACAACGATGAGCCAGGCGAAGTGGTGTTGCAGGATCCCCTGTTCGAGTCGAAACCGGCGGATGACGTCACGAAGGACGAGGACTCGTCTGCGTCGGAGAAAAAACGATACTCGTGCAACCAGTGCACCCGGTCATACACACAGAACGCGAAACTGAAGATTCACCAGaaacagcacacgggcgtgaaggaccacatctgcgaggtctgcggcgccggcttctacaaccagaagtcactcgtcaggtaTTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGATCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGATCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGACCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGATCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGATCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGACCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGATCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGATCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACGGGCGTGAAGGACCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCAGCAGTCACTCGTCAGGTATTTATTGTACACTATTAAACGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGaaacagcacacgggcgtgaaggaccacatctgcgaggtctgcggcgccggcttctacaaccagaagtcactcgtcaggtaTTTATTGTACACTATTAAACGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGATCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGACCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACAGGCGTGAAGGATCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCATAAGTCACTCGTCAGGTATTTATTGTACACTATTAAAGGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACGGGCGTGAAGGACCACATCTGCGAGGTCTGCGGCGCCGGCTTCTACAACCAGCAGTCACTCGTCAGGTATTTATTGTACACTATTAAACGATACTCGTGCAACCAGTGCACCCGGTCATTCGCACAGCAGGAGAACCCGCAGGTGCACCAGAAACAGCACACGGGCGTGAAGGACCACATCTGCGAGGTCTGCAGCGCCGGCTTCTACAACCAGCAGTCACTCGTCAGGGCTGTGCAATGTGGGTCCCTTACCCACTGGCCCTACTGGGGGAGGACGCGATCAGCGGCCGCGAATCGCGCGCGCCCTCTACCCCGCCGTCGCCTGCGCCGGAGGGGGAGCGCGTCCGCGCAGTCTTCGCGCTCCCTCTCCgtggcctccttctgcacgccctccgctcccCGTTGCGACCTGAACCGCCACCTGCGCATACACTCCGGCTACAAGCCGTTCAAGTGCGCGACCTGCACCATGTCGTTCAACGGCTCCGGGCTGCGGCGCCACATGCGGATCCACACGGGCGACAAGCGGTTCAGCTGCGACCTGTGCAGCCGCGTGTTCACGCAGAGCCACCATCTGCGGAACCACAAGCTGTCGCACACTGGGGACAAGCCGTTTGTTTGTGAGGTATGCAACGTGTGCTTCAGCTACAAGGTGAACCTGAACAACCACGTATACAAGGTGCACGGGATAAACCTCAAGTTCAAGTCTATCCACATAGTGACGGAGGAGGTGTTGCGGCGAGAGCTGGGACTGGCCGGCGAGGCGCGCGACGCCATCGCGCACATACTGCCCACGTTGGACCAGCAGCAGCAGCAGGTGCAGGTCGAATACTCGCACTAG
- Protein Sequence
- MEDSVVAVTDVMHSCRCCLRCAPDRDLKTPYTYLGTTEIYSDMLRECFDLQLEVGSNGSCGICSACVGRLRDARDFKLQVQRSQEELQARLQGDLILEGVKLEVKSEDDEDEICFVLYEDPVVKLEVDNDEPGEVVLQDPLFESKPADDVTKDEDSSASEKKRYSCNQCTRSYTQNAKLKIHQKQHTGVKDHICEVCGAGFYNQKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNQQSLVRYLLYTIKRYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNQKSLVRYLLYTIKRYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNHKSLVRYLLYTIKGYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCGAGFYNQQSLVRYLLYTIKRYSCNQCTRSFAQQENPQVHQKQHTGVKDHICEVCSAGFYNQQSLVRAVQCGSLTHWPYWGRTRSAAANRARPLPRRRLRRRGSASAQSSRSLSVASFCTPSAPRCDLNRHLRIHSGYKPFKCATCTMSFNGSGLRRHMRIHTGDKRFSCDLCSRVFTQSHHLRNHKLSHTGDKPFVCEVCNVCFSYKVNLNNHVYKVHGINLKFKSIHIVTEEVLRRELGLAGEARDAIAHILPTLDQQQQQVQVEYSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00659624;
- 90% Identity
- iTF_00659624;
- 80% Identity
- -