Enis021579.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- -
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000139.1:266235-273609[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0035 6.8 7.3 1.1 17 38 27 48 12 49 0.87 2 13 0.018 34 5.0 0.5 19 41 56 75 54 76 0.92 3 13 0.017 33 5.1 0.0 19 40 84 102 81 105 0.92 4 13 1.1 2.2e+03 -0.8 0.3 19 40 112 130 110 132 0.81 5 13 0.97 1.9e+03 -0.5 0.7 18 39 139 157 127 164 0.79 6 13 0.0095 18 5.9 0.1 18 40 167 186 155 192 0.90 7 13 0.013 25 5.5 0.1 18 40 195 214 186 217 0.88 8 13 0.0029 5.5 7.6 0.1 19 40 224 242 219 245 0.93 9 13 0.7 1.3e+03 -0.1 0.1 19 38 252 268 249 273 0.77 10 13 0.0042 8.1 7.0 0.0 18 40 279 298 272 304 0.92 11 13 0.022 43 4.7 0.0 18 40 307 326 301 329 0.91 12 13 0.69 1.3e+03 -0.1 0.1 19 29 336 346 334 357 0.76 13 13 1 2e+03 -0.6 0.6 18 29 363 374 349 379 0.79
Sequence Information
- Coding Sequence
- ATGGTTTGCGGCCAAGGCTACGAGACCATAGACGAGCTGACCGACCACACCAACTCGGCCCACGTCAAACTCAAGCCCTACGAATGCAGCGTGTGCCACAAACGCTTCACGCAGAAAGGCGGCGTCCAACACATGCGGATGCATACCGGAGACCGGCCATTCATGTGCACTTTCTGTCCTAAAGCCTTCACTCACAAGACAAACTTAGACAAGCACTTGAAGAGCCATACCGGAGACCGGCCATTCTCGTGTACTTTCTGTCCTAAAGCCTTCAGTCTGAAAACCAACTTAGACCAGCACTTGAAGATCCATACCGGAGACCGGCCATTCTCGTGCACTCTCTGTCCTAAAGCCTTCATTCAGAAGAGAAACTTAGACCACCACTTGAAGATCCATACCGGAGACCGGCAATTCTCGTGCGCTTCATGTCCTAAAGCCTTCACTCATAAGTCAGCCTTAGTCCAGCACTTGGAGATCCATACCGGAGACCGGCCATTCTCGTGCACTTTCTGTCCTAAAGCCTTCACTCAGAAAACAAACTTAGACCAGCACTTGAAGATCCATACCGGAGACCGGCTATTGTCGTGCACTTTCTGTCCTAAAACCTACACTCAGAAGTCAGTCTTAGACCGGCACTTGAGGATCCATACCGGAGACCGGCCATTCTCGTGCACTATCTGTCCTAAAGCCTACACTCAGAAGTCAGGCTTAGACCGGCACTTGAGGATACATACCGGAGACCGGCCATTCTCGTGCACTTTCTGTCCTAAAGCCTTCACTCTGAAGTCAGGCTTAGACCTGCACTTGAAGATCCATACCGGAGACCGGCCATTCTCGTGCACTTTCTGTCCTAAAGCCTACACTCAGAAGACAAACTTAGACCAGCACTTGAAGATCCATACCGGAGACCGGCAATTCTCGTGCACTTTCTGTCCTAAAGCCTTCACTCTGAAGTCAGGCTTAGATCGGCACTTGAGGATCCATACCGGAGACCGGCCATTCTCGTGCACTTTCTGTCCTAAAGCCTTCACTCAGAAGAGAGACTTAGACCACCACTTGAAGATCCATACCGGAGACCGGCCATTCTCGTGCGCTTTATGTTCTAAAGCCTTCACTCATAAAGAGCGCTCTCTATGCGAGCCCGAGGGCCGAAGGCCCGAGGGCGAGCCTTCACGAACACTAACTAAACCCAGGTGTCTTGCAAGCGAAACCGGAGACCAAAGTCCCGAGCGAGAGAAGTCAGAAGAAGAGCGGCGAGGCAAGCGAGACCAAAGGCCGAGCTTTTCGTTGGAATGA
- Protein Sequence
- MVCGQGYETIDELTDHTNSAHVKLKPYECSVCHKRFTQKGGVQHMRMHTGDRPFMCTFCPKAFTHKTNLDKHLKSHTGDRPFSCTFCPKAFSLKTNLDQHLKIHTGDRPFSCTLCPKAFIQKRNLDHHLKIHTGDRQFSCASCPKAFTHKSALVQHLEIHTGDRPFSCTFCPKAFTQKTNLDQHLKIHTGDRLLSCTFCPKTYTQKSVLDRHLRIHTGDRPFSCTICPKAYTQKSGLDRHLRIHTGDRPFSCTFCPKAFTLKSGLDLHLKIHTGDRPFSCTFCPKAYTQKTNLDQHLKIHTGDRQFSCTFCPKAFTLKSGLDRHLRIHTGDRPFSCTFCPKAFTQKRDLDHHLKIHTGDRPFSCALCSKAFTHKERSLCEPEGRRPEGEPSRTLTKPRCLASETGDQSPEREKSEEERRGKRDQRPSFSLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00659630;
- 90% Identity
- iTF_00659630;
- 80% Identity
- iTF_00659630;