Basic Information

Insect: Epinotia nisella
Gene Symbol: -
Assembly: GCA_932294385.1
Location: CAKOAM010000349.1:199668-212824[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.055 1.1e+02 3.5 0.0 17 26 213 222 206 224 0.87

2 11 0.047 90 3.7 0.0 17 26 244 253 235 255 0.84

3 11 0.047 90 3.7 0.0 17 26 275 284 266 286 0.84

4 11 0.047 90 3.7 0.0 17 26 306 315 297 317 0.84

5 11 0.047 90 3.7 0.0 17 26 337 346 328 348 0.84

6 11 0.047 90 3.7 0.0 17 26 368 377 359 379 0.84

7 11 0.047 90 3.7 0.0 17 26 399 408 390 410 0.84

8 11 0.047 90 3.7 0.0 17 26 430 439 421 441 0.84

9 11 0.0011 2.1 8.9 0.0 17 34 461 477 452 479 0.81

10 11 0.0028 5.4 7.6 2.9 16 43 586 612 573 613 0.81

11 11 3.6 7e+03 -2.4 0.0 19 38 626 642 625 645 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.055	1.1e+02	3.5	0.0	17	26	213	222	206	224	0.87
2	11	0.047	90	3.7	0.0	17	26	244	253	235	255	0.84
3	11	0.047	90	3.7	0.0	17	26	275	284	266	286	0.84
4	11	0.047	90	3.7	0.0	17	26	306	315	297	317	0.84
5	11	0.047	90	3.7	0.0	17	26	337	346	328	348	0.84
6	11	0.047	90	3.7	0.0	17	26	368	377	359	379	0.84
7	11	0.047	90	3.7	0.0	17	26	399	408	390	410	0.84
8	11	0.047	90	3.7	0.0	17	26	430	439	421	441	0.84
9	11	0.0011	2.1	8.9	0.0	17	34	461	477	452	479	0.81
10	11	0.0028	5.4	7.6	2.9	16	43	586	612	573	613	0.81
11	11	3.6	7e+03	-2.4	0.0	19	38	626	642	625	645	0.78

Sequence Information

Coding Sequence: ATGACGACGGTGATGAAGCTGGAGACGGAGGCGGAGGCTTGCTGCGTGTGCGGCGGCGGCGGCGAGCTGCTGTCGGCCGAGGAGCACGACGCGGCGGCGCCGCCGCTGTCCGGCGCGCCGCCGCTCCGCACCATGCTGCTGCAGATCAACAACAACAAGGTTCTGCCGGAGGGCCGCATCTGCGGCAGCTGCGCGCGGCGCGCGACGGAGGCCTACGAGTTCAGCTCGGCGCTCGCCGCGCGCGCCGCCGCGCCGCTCGGGGACAAGCTGCGCGCGCTGCGCCGGCGCCTGCACGACCTCACGCAGCGCATCGACGTGTTCATCGTGGTCGGCGGCGCGGGCGCTGCGCAGGGGACCTACAGCGAGGAAGACATCATCATGGTGGAGAAGGACGCGCTGGCCGCGGCCGCGGCCGCCGACGACGAGGAGTTAGAGCGCGCGAGCAACGCGCGCGGCGACCACGTCTACCAGTGCTCCGTGTGCCCGCTCTCCTTCCAGCGCGTGTCGGAGTACCGCGCGCACCTGGCGACGCACCCCGCGGACGCGCTGCACTCGTGCTGGACGTGCGGCGCGCAGTTCGCGGCGGCGCCCGCGCTGCGCGACCACCAACTCGTGCACGCGCCCGCCGCGCCGCACGCGCAGTGCAACCTCTGCCACACGCAGCTGCAGTTCGCGGCGGCGCCCGCGCTGCGCGACCACCAGCTCGCGCACGCGCCCGCCGCGCCGCACGCGCAGTGCAACCTCTGCCACACGCAGCTGCAGTTCGCGGCGGCGCCCGCGCTGCGCGACCACCAGCTCGCGCACGCGCCCGCCGCGCCGCACGCGCAGTGCAACCTCTGCCACACGCAGCTGCAGTTCGCGGCGGCGCCCGCGCTGCGCGACCACCAGCTCGCGCACGCGCCCGCCGCGCCGCACGCGCAGTGCAACCTCTGCCACACGCAGCTGCAGTTCGCGGCGGCGCCCGCGCTGCGCGACCACCAGCTCGCGCACGCGCCCGCCGCGCCGCACGCGCAGTGCAACCTCTGCCACACGCAGCTGCAGTTCGCGGCGGCGCCCGCGCTGCGCGACCACCAGCTCGCGCACGCGCCCGCCGCGCCGCACGCGCAGTGCAACCTCTGCCACACGCAGCTGCAGTTCGCGGCGGCGCCCGCGCTGCGCGACCACCAGCTCGCGCACGCGCCCGCCGCGCCGCACGCGCAGTGCAACCTCTGCCACACGCAGCTGCAGTTCGCGGCGGCGCCCGCGCTGCGCGACCACCAGCTCGCGCACGCGCCCGCCGCGCCGCACGCGCAGTGCAACCTCTGCCACACGCAGCTGCAGTTCGCGGCGGCGCCCGCGCTGCGCGACCACCAGCTCGCGCACGCGCCCGCCGCGCCGCACGCGCAGTGCAACCTCTGCCACACGCAGCTGCAGGTTGGTACCACTACTACGCTCGTGCTGGACGTGCGGCGCGCAGTTCGCGGCGGCGCCCGCGCTGCGCGACCACCAGCTCGCGCACGCGCCCGCCGCGCCGCACGCGCAGTGCAACCTCTGCCACACGCAGCTTCGCAGTCGGAGCTCCGGCGGCACGAGCAGCAGTGCCCGTCGCGCTGCCCGTGCTGCGCGCTGCTGCTGGCGGACCGCGCCGCGCTGGCCGCGCACGTGGCGGCCGCGCACGGCCGCGGCGGCCAGCTGCACGCCTGCCCCGCCTGCTTCCTCACGCTCGCCACCGCCGCGGAGCTGTCCGCGCACGTGCTGCGCCACCGCCAGGCGCGCCAGTTCGTGTGCGGCCACGACGGCTGCATACTGCGCTTCGGCACCAGGAGTAACCTGATGTCGCACATCCGCAAGTGCCACGGCGGCACGGAGGCGGCGCCGGAGCCCGAGGGCTCCGCCTGTGAAGAATGCGGCCGCACGTTCGCGAGTGTGGCGGCGCTGAAGCGCCACGCGCGCGTGCACCGGAACACGCGCGCCGAACACACGCAGCAGGAGGTGGACTCGGGCGCGGAGATGCTGATGATGGAGACGGAGGAGCTGGAGGGGGAGGTGGAGTACCTGGAGGTGGAGACCCTCGAGGACGCCGAGCTGTTCGGCGAGCGCAAGCCGCAGCTGCCCGCGCTGCGCTAG
Protein Sequence: MTTVMKLETEAEACCVCGGGGELLSAEEHDAAAPPLSGAPPLRTMLLQINNNKVLPEGRICGSCARRATEAYEFSSALAARAAAPLGDKLRALRRRLHDLTQRIDVFIVVGGAGAAQGTYSEEDIIMVEKDALAAAAAADDEELERASNARGDHVYQCSVCPLSFQRVSEYRAHLATHPADALHSCWTCGAQFAAAPALRDHQLVHAPAAPHAQCNLCHTQLQFAAAPALRDHQLAHAPAAPHAQCNLCHTQLQFAAAPALRDHQLAHAPAAPHAQCNLCHTQLQFAAAPALRDHQLAHAPAAPHAQCNLCHTQLQFAAAPALRDHQLAHAPAAPHAQCNLCHTQLQFAAAPALRDHQLAHAPAAPHAQCNLCHTQLQFAAAPALRDHQLAHAPAAPHAQCNLCHTQLQFAAAPALRDHQLAHAPAAPHAQCNLCHTQLQFAAAPALRDHQLAHAPAAPHAQCNLCHTQLQVGTTTTLVLDVRRAVRGGARAARPPARARARRAARAVQPLPHAASQSELRRHEQQCPSRCPCCALLLADRAALAAHVAAAHGRGGQLHACPACFLTLATAAELSAHVLRHRQARQFVCGHDGCILRFGTRSNLMSHIRKCHGGTEAAPEPEGSACEECGRTFASVAALKRHARVHRNTRAEHTQQEVDSGAEMLMMETEELEGEVEYLEVETLEDAELFGERKPQLPALR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00659931;
90% Identity: iTF_00659931;
80% Identity: iTF_00659931;