Enis024059.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- Hid1
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000305.1:22173-32227[-]
Transcription Factor Domain
- TF Family
- NF-YB
- Domain
- NF-YB domain
- PFAM
- AnimalTFDB
- TF Group
- Other Alpha-Helix Group
- Description
- Diverse DNA binding proteins are known to bind the CCAAT box, a common cis- acting element found in the promoter and enhancer regions of a large number of genes in eukaryotes. Amongst these proteins is one known as the CCAAT-binding factor (CBF) or nuclear transcription factor Y (NF-Y) [1]. CBF is a heteromeric transcription factor that consists of two different components both needed for DNA-binding. The HAP protein complex of yeast binds to the upstream activation site of cytochrome C iso-1 gene (CYC1) as well as other genes involved in mitochondrial electron transport and activates their expression. It also recognises the sequence CCAAT and is structurally and evolutionary related to CBF.The first subunit of CBF is known as CBF-A or NF-YB in vertebrates, and HAP3 in budding yeast. The second subunit is known as CBF-B or NF-YA in vertebrates and HAP2 in budding yeast. It is a protein of 265 to 350 amino-acid residues which contains a highly conserved region of about 60 residues. This region, called the 'essential core' [2], seems to consist of two subdomains: an N-terminal subunit-association domain and a C-terminal DNA recognition domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 40 0.021 2.6e+02 1.4 0.0 57 84 227 254 223 256 0.92 2 40 0.022 2.8e+02 1.3 0.0 57 84 261 288 259 290 0.92 3 40 0.022 2.8e+02 1.3 0.0 57 84 295 322 293 324 0.92 4 40 0.022 2.8e+02 1.3 0.0 57 84 329 356 327 358 0.92 5 40 0.022 2.8e+02 1.3 0.0 57 84 363 390 361 392 0.92 6 40 0.022 2.8e+02 1.3 0.0 57 84 397 424 395 426 0.92 7 40 0.022 2.8e+02 1.3 0.0 57 84 431 458 429 460 0.92 8 40 0.022 2.8e+02 1.3 0.0 57 84 465 492 463 494 0.92 9 40 0.022 2.8e+02 1.3 0.0 57 84 499 526 497 528 0.92 10 40 0.022 2.8e+02 1.3 0.0 57 84 533 560 531 562 0.92 11 40 0.022 2.8e+02 1.3 0.0 57 84 567 594 565 596 0.92 12 40 0.022 2.8e+02 1.3 0.0 57 84 601 628 599 630 0.92 13 40 0.022 2.8e+02 1.3 0.0 57 84 635 662 633 664 0.92 14 40 0.022 2.8e+02 1.3 0.0 57 84 669 696 667 698 0.92 15 40 0.022 2.8e+02 1.3 0.0 57 84 703 730 701 732 0.92 16 40 0.022 2.8e+02 1.3 0.0 57 84 737 764 735 766 0.92 17 40 0.022 2.8e+02 1.3 0.0 57 84 771 798 769 800 0.92 18 40 0.022 2.8e+02 1.3 0.0 57 84 805 832 803 834 0.92 19 40 0.022 2.8e+02 1.3 0.0 57 84 839 866 837 868 0.92 20 40 0.022 2.8e+02 1.3 0.0 57 84 873 900 871 902 0.92 21 40 0.016 2e+02 1.8 0.0 57 84 907 934 905 936 0.92 22 40 0.022 2.8e+02 1.3 0.0 57 84 941 968 939 970 0.92 23 40 0.022 2.8e+02 1.3 0.0 57 84 975 1002 973 1004 0.92 24 40 0.022 2.8e+02 1.3 0.0 57 84 1009 1036 1007 1038 0.92 25 40 0.022 2.8e+02 1.3 0.0 57 84 1043 1070 1041 1072 0.92 26 40 0.022 2.8e+02 1.3 0.0 57 84 1077 1104 1075 1106 0.92 27 40 0.022 2.8e+02 1.3 0.0 57 84 1111 1138 1109 1140 0.92 28 40 0.022 2.8e+02 1.3 0.0 57 84 1145 1172 1143 1174 0.92 29 40 0.016 2e+02 1.8 0.0 57 84 1179 1206 1177 1208 0.92 30 40 0.022 2.8e+02 1.3 0.0 57 84 1213 1240 1211 1242 0.92 31 40 0.022 2.8e+02 1.3 0.0 57 84 1247 1274 1245 1276 0.92 32 40 0.022 2.8e+02 1.3 0.0 57 84 1281 1308 1279 1310 0.92 33 40 0.02 2.5e+02 1.5 0.0 57 84 1315 1342 1312 1344 0.91 34 40 0.022 2.8e+02 1.3 0.0 57 84 1349 1376 1347 1378 0.92 35 40 0.022 2.8e+02 1.3 0.0 57 84 1383 1410 1381 1412 0.92 36 40 0.022 2.8e+02 1.3 0.0 57 84 1417 1444 1415 1446 0.92 37 40 0.022 2.8e+02 1.3 0.0 57 84 1451 1478 1449 1480 0.92 38 40 0.022 2.8e+02 1.3 0.0 57 84 1485 1512 1483 1514 0.92 39 40 0.022 2.8e+02 1.3 0.0 57 84 1519 1546 1517 1548 0.92 40 40 0.15 1.8e+03 -1.3 0.0 57 79 1553 1575 1552 1578 0.92
Sequence Information
- Coding Sequence
- ATGGAGAAGAACCACAGCGGCCGAGAACGCATCGCTCAGCAACTAGAGCACAGCCAGTCGTTATTAGAGGGAGCGCGCAGCGACGGCGATGGAGAAGACTGTGAACCTGATGCTATAACCGATGGAGAAGAACCACAGCGGCCGAGGACGCATCTACACAGGCGATTTGAAGTCAGCGCTCAGCAACTAGAGCACAGCCAGTCGTTATTAGAGGGAGCGCGCAGCGACGGCGATGGAGAAGACTGTGAACCTGATGCTATAACCGATGGAGAAGAACCACAGCGGCCGAGGACGCATCTACACAGGCGATTTGAAGTCAGCGCTCAGCAACTAGAGCACAGCCAGTCGTTATTAGAGGGAGCGCGCAGCGACGGCGATGGAGAAGACTGTGAACCTGATGCTATAACCGATGGAGAAGAACCACAGCGGCCGAGGACGCATCGACACTGGCGATTTGAAGTCAGCGCTCAGCAACTAGAGCACAGCCAGTCGTTATTAGAGGGAGCGCGCAGCGGCGGCGATGGAGAAGACTGTGAACCTGATGCTATAACCGATGGAGAAGAACCACAGCGGCCGAGGACGCATCGGGACAGCATAAAGTGTACCTCCAGCGTCCGCAGCCCGAGCAGGGAGGGCTGGCGGGCCAGCGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAGCGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAGCGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGACAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAACGCCGAGTGGGTGGCGGGCTGGCGCGGCAAGCTGCCGCTGCAGACCATCATGCGGCTGCTGCAGGTGCTGGTGCCGCAGGTCGAGAAGATCTGCATCGACAAAGGGCTGACGGACGAGTCCGAGATCCTGCGGTTCCTGCAGCACGGCACGCTCGTGGGGCTGCTGCCCGTGCCGCACCCCATCCTCATCCGCAAGTACCAGGCCAACGCCGGCACCGCCGCCTGGTTCCGCACATACATGTGGGGCGTCATATACATACGAAACGTGGACCCACCGATTTGGTACGACACGGACGTGAAACTGTTCGAGATCCAGCGAGTGTGA
- Protein Sequence
- MEKNHSGRERIAQQLEHSQSLLEGARSDGDGEDCEPDAITDGEEPQRPRTHLHRRFEVSAQQLEHSQSLLEGARSDGDGEDCEPDAITDGEEPQRPRTHLHRRFEVSAQQLEHSQSLLEGARSDGDGEDCEPDAITDGEEPQRPRTHRHWRFEVSAQQLEHSQSLLEGARSGGDGEDCEPDAITDGEEPQRPRTHRDSIKCTSSVRSPSREGWRASAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDSAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDSAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRDKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDNAEWVAGWRGKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILRFLQHGTLVGLLPVPHPILIRKYQANAGTAAWFRTYMWGVIYIRNVDPPIWYDTDVKLFEIQRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -