Enis025172.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- CDAN1
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000348.1:6955195-6978570[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.005 10 6.4 0.0 27 37 66 77 65 81 0.84 2 4 0.005 10 6.4 0.0 27 37 142 153 141 157 0.84 3 4 0.0048 10 6.4 0.0 27 37 206 217 204 221 0.85 4 4 0.005 10 6.4 0.0 27 37 282 293 281 297 0.84
Sequence Information
- Coding Sequence
- ATGTTCAAGTGCGAGGCGGAGAGCCAGGAGAAGCCAAGGCCTGTTGATAAGAGGATATCTAACGGGATTGTGTGCTTTAACTTTGAGACGGATAATGCGGAGAACTTTCCGTCGTTGCTCAGCTTTCAGAACTTTAAGAAGCAGAGGGATATGTTCTATGAAATATTAAGATGGTACACAGAGAGTGCAGCGACCGGCGTGCCTCGCTCGACGCTCCGCGCTCGCGTCAAGAGTCTAGTGGGCGCCGGGCACTCGCCCACCAACCACGCGCACCTCGCCTCGCTCGTCGTCGCTCACATGCTCGCTGAGTGTCTACACACGGACCAGGTACGTTGTCTTGCAGATGGTACACAGAGAGTGCAGCGACCGGCGTGCCTCGCTCGACGCTCCGCGCTCGCATGGTACACAGAGAGTGCAGCGACCGGCGTGCCTCGCTCGACGCTCCGCGCTCGCGTCAAGAGTCTAGTGGGCGCCGGGCACTCGCCCACCAACCACGCGCACCTCGCCTCGCTCGTCGTCGCTCACATGCTCGCTGAGTGTCTACACACGGACCAGGTACGTTGTCTTGCAGATGGTACGTTGTCTTGCAGATGGTACACAGAGAGTGCAGCGACCGGCGTGCCTCGCTCGACGCTCCGCGCTCGCGTCAAGAGTCTAGTGGGCGCCGGGCACTCGCCCACCAACCACGCGCACCTCGCCTCGCTCGTCGTCGCTCACATGCTCGCTGAGTGTCTACACACGGACCAGGTACGTTGTCTTGCAGATGGTACACAGAGAGTGCAGCGACCGGCGTGCCTCGCTCGACGCTCCGCGCTCGCATGGTACACAGAGAGTGCAGCGACCGGCGTGCCTCGCTCGACGCTCCGCGCTCGCGTCAAGAGTCTAGTGGGCGCCGGGCACTCGCCCACCAACCACGCGCACCTCGCCTCGCTCGTCGTCGCTCACATGCTCGCTGAGTGTCTACACACGGACCAGGTACGTTGTCTTGCAGATGCTAACAACAGCGACGTCTCAAGAGACTACCTCCAGCTCCAACGGAAGCTGTGTCTCGTGGCCAAGTTCCTGGGTTTCCTGGCGTCCCTGCCGTACGTGGCGCTGCCGGCGGACAGCAAGGCCGCGGTGGGCCGCGGCGGCAGGGACGAATTGTGCGTAGAGCCGAAGGAGAGGGTTCTGCAGAGCAGCTTGAAGGCTAGGAGTTATATGCGTTTAGAGGAGGAACTCATAAAGTCGCAGCCCTCGTCCACCCGAAGAGTGCTAGAGCTGGTCATAGAGCGCGTCACCGCGGCCTGCGTGCGCGACCTCACCGCCTCCGTCAACCACGCGCGAGCAAAGGCGAGGGACACCGCGCGCAAGGCCGTCGCCGAGCGGGGGGAGGACTTGCAAGCGCTTCTCAAAACTCTTCAATCAATCTACACATCCCACCTGGCACAACTGCGCGAGTCTGCACAAAACATCGACACTCTATCGAGAGTCAGTGGCGCTCTATCTTCGCTGCTGCCTCTAGCGCCTAAGGCTCTACACTACGCGGCCGCGAGAGCGAGCAAAGCGGCCGTGCTGAGGTGGGCGAGGGACCATTGGACCAGTACTGGTCACTTCGGCGTCAAGGATCTCTTGGCCAAGATGGGACTATCAAACAGTACAGACTGTAGAATGTGTGGCGAGGAGGATGAGACTATGGAACACTTACTGTGCGAATGTCATGCCCTTGCCAGACAAAGAATGAATCTCTTTGGTAACGGCTACCCGCAACCAAAGGAATTCAGGGTGCTCCCACTGAGCTGCATCATCCGCTTTGTGGAAATGGAGCGAGCTTGGGAGTAG
- Protein Sequence
- MFKCEAESQEKPRPVDKRISNGIVCFNFETDNAENFPSLLSFQNFKKQRDMFYEILRWYTESAATGVPRSTLRARVKSLVGAGHSPTNHAHLASLVVAHMLAECLHTDQVRCLADGTQRVQRPACLARRSALAWYTESAATGVPRSTLRARVKSLVGAGHSPTNHAHLASLVVAHMLAECLHTDQVRCLADGTLSCRWYTESAATGVPRSTLRARVKSLVGAGHSPTNHAHLASLVVAHMLAECLHTDQVRCLADGTQRVQRPACLARRSALAWYTESAATGVPRSTLRARVKSLVGAGHSPTNHAHLASLVVAHMLAECLHTDQVRCLADANNSDVSRDYLQLQRKLCLVAKFLGFLASLPYVALPADSKAAVGRGGRDELCVEPKERVLQSSLKARSYMRLEEELIKSQPSSTRRVLELVIERVTAACVRDLTASVNHARAKARDTARKAVAERGEDLQALLKTLQSIYTSHLAQLRESAQNIDTLSRVSGALSSLLPLAPKALHYAAARASKAAVLRWARDHWTSTGHFGVKDLLAKMGLSNSTDCRMCGEEDETMEHLLCECHALARQRMNLFGNGYPQPKEFRVLPLSCIIRFVEMERAWE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -