Basic Information

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 5.5e-12 9.3e-09 36.0 0.0 34 88 7 58 5 59 0.90

2 4 1.5e-11 2.5e-08 34.7 0.0 24 72 76 122 61 128 0.80

3 4 9.1e-16 1.5e-12 48.2 0.0 14 88 121 186 115 187 0.83

4 4 3.6e-16 6.1e-13 49.5 0.0 24 88 204 265 191 266 0.86

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	5.5e-12	9.3e-09	36.0	34	88	7	58	5	59	0.90
2	4	1.5e-11	2.5e-08	34.7	24	72	76	122	61	128	0.80
3	4	9.1e-16	1.5e-12	48.2	14	88	121	186	115	187	0.83
4	4	3.6e-16	6.1e-13	49.5	24	88	204	265	191	266	0.86

Coding Sequence: ATGATCATCAGACGAGTTATCAAGCTATACCACGTGGTCGAGCGCAACGGCGGACTAAGCAATGTCATCCAACGCAAGCGCTGGGGCCGGGTCGCCGACGAAATTAAACTGACCAAGCTGCAGTACCCGAAGAGGGAGCTAGATCCGATATATAGGCGGTACCTGTTACCCTACGCCACGCTGTCCGACCGTAAGTACACCATTGATTCACCATCATCACACCAATTCCAGTTGGACGGCAGTGAGGTGAACCTGCCCAAGGTATACCACGCGGTCGAGCGCAACGGCGGACTCAGCAACGTAATCCAACGCAAGCGCTGGGGCCGGGTCGCCGAGGAGATGAAACTGACCAAGCTGCATACATCACACCAATTCCAGTTGGACGGCAGTGAGGTGAACCTGCCCAAGCTATACCACGCGGTCGAGCGCAACGGCGGGCTCAGCAATGTAATCCAACGCAAGCGCTGGCGCCGGGTCGCCGACGAAATTAAAGTAACCAAGCTGCTGCACCCGGAGAGGAAGCTAGATCCGATATATAGGCGGTATCTGTTACCCTACGCCACGCTGTCCGACCGTAAGTACACCATTGATTCTAGTACATCACACCAATTCCAGTTGGACGGCAGTGAGGTGAACCTGCCCAAGCTATACCACGCGGTCGAGCGCAACGGCGGGTTCAGCAATGTAATCCAACGCAAGCGCTGGCGCCGGGTCGCCGACGAAATTAAAGTAACCAAGCTGCTGCACCCGGAGAGGAAGCTAGATCCGATATATAGGCGGTATCTGTTACCCTACGCCACGCTGTCCGACCGTAAGTACACCATTGATTCTAGTACATCACACCAATTCCAGTTGGACGGCAGTGAGGTGAACCTGTAG
Protein Sequence: MIIRRVIKLYHVVERNGGLSNVIQRKRWGRVADEIKLTKLQYPKRELDPIYRRYLLPYATLSDRKYTIDSPSSHQFQLDGSEVNLPKVYHAVERNGGLSNVIQRKRWGRVAEEMKLTKLHTSHQFQLDGSEVNLPKLYHAVERNGGLSNVIQRKRWRRVADEIKVTKLLHPERKLDPIYRRYLLPYATLSDRKYTIDSSTSHQFQLDGSEVNLPKLYHAVERNGGFSNVIQRKRWRRVADEIKVTKLLHPERKLDPIYRRYLLPYATLSDRKYTIDSSTSHQFQLDGSEVNL

Sequence clustering based on sequence similarity using MMseqs2